Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
PCDHGA3Q9Y5H0 SDAD1P2-201ENST00000441308 2028 ntBASIC4.37□□□□□ -1.71
PCDHGA3Q9Y5H0 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PCDHGA3Q9Y5H0 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.37□□□□□ -1.71
PCDHGA3Q9Y5H0 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
PCDHGA3Q9Y5H0 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
PCDHGA3Q9Y5H0 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
PCDHGA3Q9Y5H0 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.36□□□□□ -1.71
PCDHGA3Q9Y5H0 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHGA3Q9Y5H0 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHGA3Q9Y5H0 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
PCDHGA3Q9Y5H0 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
PCDHGA3Q9Y5H0 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.36□□□□□ -1.71
PCDHGA3Q9Y5H0 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHGA3Q9Y5H0 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHGA3Q9Y5H0 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHGA3Q9Y5H0 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHGA3Q9Y5H0 Y_RNA.126-201ENST00000363382 111 ntBASIC4.36□□□□□ -1.71
PCDHGA3Q9Y5H0 SNORA51.2-201ENST00000364595 132 ntBASIC4.36□□□□□ -1.71
PCDHGA3Q9Y5H0 RNA5SP167-201ENST00000365461 116 ntBASIC4.36□□□□□ -1.71
PCDHGA3Q9Y5H0 RNU6-877P-201ENST00000383868 107 ntBASIC4.36□□□□□ -1.71
PCDHGA3Q9Y5H0 OR51A5P-201ENST00000415429 942 ntBASIC4.36□□□□□ -1.71
PCDHGA3Q9Y5H0 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHGA3Q9Y5H0 RPS29P17-201ENST00000430795 166 ntBASIC4.36□□□□□ -1.71
PCDHGA3Q9Y5H0 RPL23AP30-201ENST00000432419 501 ntBASIC4.36□□□□□ -1.71
PCDHGA3Q9Y5H0 WASF1P1-201ENST00000447560 1131 ntBASIC4.36□□□□□ -1.71
PCDHGA3Q9Y5H0 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC4.36□□□□□ -1.71
PCDHGA3Q9Y5H0 RAD23BP3-201ENST00000454157 1152 ntBASIC4.36□□□□□ -1.71
PCDHGA3Q9Y5H0 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC4.36□□□□□ -1.71
PCDHGA3Q9Y5H0 AC092989.1-201ENST00000481235 277 ntBASIC4.36□□□□□ -1.71
PCDHGA3Q9Y5H0 HMGB1P22-201ENST00000505315 124 ntBASIC4.36□□□□□ -1.71
PCDHGA3Q9Y5H0 HSPD1P15-201ENST00000505573 1122 ntBASIC4.36□□□□□ -1.71
PCDHGA3Q9Y5H0 AC105417.1-201ENST00000514691 285 ntBASIC4.36□□□□□ -1.71
PCDHGA3Q9Y5H0 RNU6-1092P-201ENST00000516955 87 ntBASIC4.36□□□□□ -1.71
PCDHGA3Q9Y5H0 RNU6-1220P-201ENST00000517126 108 ntBASIC4.36□□□□□ -1.71
PCDHGA3Q9Y5H0 ERHP1-201ENST00000523006 310 ntBASIC4.36□□□□□ -1.71
PCDHGA3Q9Y5H0 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.36□□□□□ -1.71
PCDHGA3Q9Y5H0 AC007224.1-201ENST00000564410 144 ntBASIC4.36□□□□□ -1.71
PCDHGA3Q9Y5H0 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.36□□□□□ -1.71
PCDHGA3Q9Y5H0 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.36□□□□□ -1.71
PCDHGA3Q9Y5H0 MIR7154-201ENST00000620673 73 ntBASIC4.36□□□□□ -1.71
PCDHGA3Q9Y5H0 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHGA3Q9Y5H0 AC112200.1-201ENST00000625015 234 ntBASIC4.36□□□□□ -1.71
PCDHGA3Q9Y5H0 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.36□□□□□ -1.71
PCDHGA3Q9Y5H0 AC009812.4-201ENST00000569134 1805 ntBASIC4.36□□□□□ -1.71
PCDHGA3Q9Y5H0 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
PCDHGA3Q9Y5H0 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHGA3Q9Y5H0 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHGA3Q9Y5H0 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHGA3Q9Y5H0 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
PCDHGA3Q9Y5H0 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
PCDHGA3Q9Y5H0 ZNF680P1-201ENST00000436625 1469 ntBASIC4.36□□□□□ -1.71
PCDHGA3Q9Y5H0 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHGA3Q9Y5H0 AL136164.3-201ENST00000624429 3978 ntBASIC4.36□□□□□ -1.71
PCDHGA3Q9Y5H0 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 DEFB108F-201ENST00000344638 222 ntBASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 Y_RNA.256-201ENST00000364594 104 ntBASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 RNA5SP189-201ENST00000364920 115 ntBASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 RNU6-641P-201ENST00000384006 107 ntBASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 RNU6-483P-201ENST00000384088 108 ntBASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 RNU6-39P-201ENST00000384344 107 ntBASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 SNORA70C-201ENST00000384538 135 ntBASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 MIR454-201ENST00000390180 115 ntBASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 SNORA57.1-201ENST00000391227 145 ntBASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 MIR921-201ENST00000401133 56 ntBASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 ARL4AP5-201ENST00000404372 599 ntBASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 AL359634.1-202ENST00000404721 284 ntBASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 ZNF90P2-204ENST00000419323 1075 ntBASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 MTATP6P4-201ENST00000427725 675 ntBASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 AC011998.1-201ENST00000433403 117 ntBASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 AC024082.2-201ENST00000434771 238 ntBASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 AC122718.1-201ENST00000439448 744 ntBASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 BNIP3P2-201ENST00000441221 577 ntBASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 AL359073.1-201ENST00000448036 403 ntBASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 snoU13.4-201ENST00000458916 104 ntBASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 RNU7-63P-201ENST00000459054 62 ntBASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 FAM133DP-201ENST00000464802 691 ntBASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 RPL21P126-201ENST00000470049 478 ntBASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 AC116562.3-201ENST00000506136 177 ntBASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 AC004062.1-201ENST00000509926 645 ntBASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 AC005921.1-201ENST00000510589 286 ntBASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 GMPSP1-201ENST00000514075 579 ntBASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 RNU6-390P-201ENST00000516259 103 ntBASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 SNORD27.1-201ENST00000516319 72 ntBASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 AC068587.5-201ENST00000528506 175 ntBASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 ARL2BPP2-201ENST00000550907 489 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms