Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.33□□□□□ -1.72
PCDHGA6Q9Y5G7 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.33□□□□□ -1.72
PCDHGA6Q9Y5G7 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
PCDHGA6Q9Y5G7 AL008636.1-201ENST00000625038 1018 ntBASIC4.33□□□□□ -1.72
PCDHGA6Q9Y5G7 FER-210ENST00000628534 558 ntTSL 5 BASIC4.33□□□□□ -1.72
PCDHGA6Q9Y5G7 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PCDHGA6Q9Y5G7 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
PCDHGA6Q9Y5G7 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.33□□□□□ -1.72
PCDHGA6Q9Y5G7 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.33□□□□□ -1.72
PCDHGA6Q9Y5G7 BDP1P-201ENST00000582658 1990 ntBASIC4.33□□□□□ -1.72
PCDHGA6Q9Y5G7 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 XIAPP3-201ENST00000312918 795 ntBASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 Y_RNA.22-201ENST00000362492 102 ntBASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 Y_RNA.89-201ENST00000363031 102 ntBASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 Y_RNA.295-201ENST00000364918 102 ntBASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 Y_RNA.367-201ENST00000365544 101 ntBASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 SNRPFP1-201ENST00000414761 252 ntBASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 RPL7AP25-201ENST00000423357 805 ntBASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 AC008850.1-201ENST00000427546 362 ntBASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 RPL7L1P10-201ENST00000427790 463 ntBASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 AL353572.1-201ENST00000442490 417 ntBASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 RPL23AP31-201ENST00000456160 467 ntBASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 RN7SL303P-201ENST00000469773 251 ntBASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 AC116353.2-201ENST00000505332 712 ntBASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 AC026427.2-201ENST00000506228 536 ntBASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 SNORA40.12-201ENST00000516329 111 ntBASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 Y_RNA.704-201ENST00000516851 102 ntBASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 SNORA31.22-201ENST00000517204 135 ntBASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 AC118273.2-201ENST00000532092 465 ntBASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 AP004242.1-201ENST00000533701 349 ntBASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 MIR3921-201ENST00000577308 85 ntBASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 MIR3160-1-201ENST00000577972 85 ntBASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 AC008752.3-201ENST00000588113 712 ntBASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 AL355810.1-201ENST00000614629 552 ntBASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 AC010133.1-201ENST00000615809 842 ntBASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 AC068724.3-201ENST00000625906 87 ntBASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 AC138649.5-201ENST00000637456 137 ntBASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 PNPT1P2-201ENST00000456768 2050 ntBASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 AC068254.2-201ENST00000623938 3577 ntBASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHGA6Q9Y5G7 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.31□□□□□ -1.72
PCDHGA6Q9Y5G7 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.31□□□□□ -1.72
PCDHGA6Q9Y5G7 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
PCDHGA6Q9Y5G7 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
PCDHGA6Q9Y5G7 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PCDHGA6Q9Y5G7 RNU1-108P-201ENST00000362556 161 ntBASIC4.31□□□□□ -1.72
PCDHGA6Q9Y5G7 SNORA31-201ENST00000362607 130 ntBASIC4.31□□□□□ -1.72
PCDHGA6Q9Y5G7 RNU6-179P-201ENST00000363350 107 ntBASIC4.31□□□□□ -1.72
PCDHGA6Q9Y5G7 RNA5SP28-201ENST00000363841 119 ntBASIC4.31□□□□□ -1.72
PCDHGA6Q9Y5G7 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PCDHGA6Q9Y5G7 RNU6-780P-201ENST00000391030 104 ntBASIC4.31□□□□□ -1.72
PCDHGA6Q9Y5G7 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.31□□□□□ -1.72
PCDHGA6Q9Y5G7 EIF4EP1-201ENST00000422311 642 ntBASIC4.31□□□□□ -1.72
PCDHGA6Q9Y5G7 RPL27AP8-201ENST00000424277 446 ntBASIC4.31□□□□□ -1.72
PCDHGA6Q9Y5G7 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.31□□□□□ -1.72
PCDHGA6Q9Y5G7 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.31□□□□□ -1.72
PCDHGA6Q9Y5G7 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.31□□□□□ -1.72
PCDHGA6Q9Y5G7 AL606489.2-201ENST00000433886 234 ntBASIC4.31□□□□□ -1.72
PCDHGA6Q9Y5G7 RPL26P6-201ENST00000440913 438 ntBASIC4.31□□□□□ -1.72
PCDHGA6Q9Y5G7 MTND4P18-201ENST00000447010 465 ntBASIC4.31□□□□□ -1.72
PCDHGA6Q9Y5G7 DPPA3P1-201ENST00000448050 469 ntBASIC4.31□□□□□ -1.72
PCDHGA6Q9Y5G7 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.31□□□□□ -1.72
PCDHGA6Q9Y5G7 FDX1P2-201ENST00000450769 375 ntBASIC4.31□□□□□ -1.72
PCDHGA6Q9Y5G7 AC079804.1-201ENST00000461922 436 ntBASIC4.31□□□□□ -1.72
PCDHGA6Q9Y5G7 AC108022.1-201ENST00000493466 478 ntBASIC4.31□□□□□ -1.72
PCDHGA6Q9Y5G7 RNU6-1073P-201ENST00000517182 106 ntBASIC4.31□□□□□ -1.72
PCDHGA6Q9Y5G7 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.31□□□□□ -1.72
PCDHGA6Q9Y5G7 AP001646.1-201ENST00000527936 915 ntBASIC4.31□□□□□ -1.72
PCDHGA6Q9Y5G7 SNRPGP16-201ENST00000533275 226 ntBASIC4.31□□□□□ -1.72
PCDHGA6Q9Y5G7 MIR3939-201ENST00000582614 106 ntBASIC4.31□□□□□ -1.72
PCDHGA6Q9Y5G7 MIR7154-201ENST00000620673 73 ntBASIC4.31□□□□□ -1.72
PCDHGA6Q9Y5G7 AC007998.5-201ENST00000622938 237 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 159.2 ms