Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 Y_RNA.318-201ENST00000365131 97 ntBASIC3.55□□□□□ -1.84
YIPF1Q9Y548 Y_RNA.548-201ENST00000384656 105 ntBASIC3.55□□□□□ -1.84
YIPF1Q9Y548 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
YIPF1Q9Y548 AL583834.1-201ENST00000406943 343 ntBASIC3.55□□□□□ -1.84
YIPF1Q9Y548 RN7SKP56-201ENST00000410513 331 ntBASIC3.55□□□□□ -1.84
YIPF1Q9Y548 RNU2-47P-201ENST00000410649 186 ntBASIC3.55□□□□□ -1.84
YIPF1Q9Y548 AMD1P2-201ENST00000412936 992 ntBASIC3.55□□□□□ -1.84
YIPF1Q9Y548 BTF3L4P1-201ENST00000413813 468 ntBASIC3.55□□□□□ -1.84
YIPF1Q9Y548 Z99755.1-201ENST00000414048 380 ntBASIC3.55□□□□□ -1.84
YIPF1Q9Y548 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
YIPF1Q9Y548 AC010153.1-201ENST00000432862 727 ntBASIC3.55□□□□□ -1.84
YIPF1Q9Y548 GDI2P2-201ENST00000445131 608 ntBASIC3.55□□□□□ -1.84
YIPF1Q9Y548 Z75741.1-201ENST00000446793 314 ntBASIC3.55□□□□□ -1.84
YIPF1Q9Y548 SNRPGP9-201ENST00000456025 225 ntBASIC3.55□□□□□ -1.84
YIPF1Q9Y548 AP001025.2-201ENST00000490908 477 ntBASIC3.55□□□□□ -1.84
YIPF1Q9Y548 RN7SL504P-201ENST00000494496 287 ntBASIC3.55□□□□□ -1.84
YIPF1Q9Y548 TXNP6-201ENST00000510190 310 ntBASIC3.55□□□□□ -1.84
YIPF1Q9Y548 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.55□□□□□ -1.84
YIPF1Q9Y548 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.55□□□□□ -1.84
YIPF1Q9Y548 PHBP14-201ENST00000512887 367 ntBASIC3.55□□□□□ -1.84
YIPF1Q9Y548 APOOP4-201ENST00000513530 597 ntBASIC3.55□□□□□ -1.84
YIPF1Q9Y548 MIR2114-201ENST00000516645 80 ntBASIC3.55□□□□□ -1.84
YIPF1Q9Y548 Y_RNA.695-201ENST00000516715 107 ntBASIC3.55□□□□□ -1.84
YIPF1Q9Y548 RNU6-714P-201ENST00000516963 103 ntBASIC3.55□□□□□ -1.84
YIPF1Q9Y548 AC025881.1-201ENST00000518851 512 ntBASIC3.55□□□□□ -1.84
YIPF1Q9Y548 RPL12P22-201ENST00000519073 490 ntBASIC3.55□□□□□ -1.84
YIPF1Q9Y548 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.55□□□□□ -1.84
YIPF1Q9Y548 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.55□□□□□ -1.84
YIPF1Q9Y548 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.55□□□□□ -1.84
YIPF1Q9Y548 AC099489.2-201ENST00000574976 260 ntBASIC3.55□□□□□ -1.84
YIPF1Q9Y548 MIR548AB-201ENST00000584917 84 ntBASIC3.55□□□□□ -1.84
YIPF1Q9Y548 AC040904.1-201ENST00000590850 223 ntBASIC3.55□□□□□ -1.84
YIPF1Q9Y548 AC073544.2-201ENST00000601155 540 ntBASIC3.55□□□□□ -1.84
YIPF1Q9Y548 AC012065.4-201ENST00000602445 679 ntBASIC3.55□□□□□ -1.84
YIPF1Q9Y548 AC112187.2-201ENST00000604345 283 ntBASIC3.55□□□□□ -1.84
YIPF1Q9Y548 AC004853.1-201ENST00000604902 698 ntBASIC3.55□□□□□ -1.84
YIPF1Q9Y548 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.55□□□□□ -1.84
YIPF1Q9Y548 AC022149.2-201ENST00000621061 203 ntBASIC3.55□□□□□ -1.84
YIPF1Q9Y548 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
YIPF1Q9Y548 AL049780.3-201ENST00000624612 1583 ntBASIC3.55□□□□□ -1.84
YIPF1Q9Y548 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
YIPF1Q9Y548 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
YIPF1Q9Y548 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
YIPF1Q9Y548 AC006378.2-201ENST00000623178 2476 ntBASIC3.54□□□□□ -1.84
YIPF1Q9Y548 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.54□□□□□ -1.84
YIPF1Q9Y548 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
YIPF1Q9Y548 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
YIPF1Q9Y548 AL390237.1-201ENST00000404226 1415 ntBASIC3.54□□□□□ -1.84
YIPF1Q9Y548 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.54□□□□□ -1.84
YIPF1Q9Y548 RNU6-1249P-201ENST00000363237 111 ntBASIC3.54□□□□□ -1.84
YIPF1Q9Y548 RNA5SP322-201ENST00000363617 119 ntBASIC3.54□□□□□ -1.84
YIPF1Q9Y548 RNU6-853P-201ENST00000364306 107 ntBASIC3.54□□□□□ -1.84
YIPF1Q9Y548 Y_RNA.234-201ENST00000364409 97 ntBASIC3.54□□□□□ -1.84
YIPF1Q9Y548 RNU6-1207P-201ENST00000384343 107 ntBASIC3.54□□□□□ -1.84
YIPF1Q9Y548 RNU1-89P-201ENST00000384592 164 ntBASIC3.54□□□□□ -1.84
YIPF1Q9Y548 MIR128-1-201ENST00000384921 82 ntBASIC3.54□□□□□ -1.84
YIPF1Q9Y548 AL356421.1-201ENST00000403255 413 ntBASIC3.54□□□□□ -1.84
YIPF1Q9Y548 AL357075.1-201ENST00000404107 726 ntBASIC3.54□□□□□ -1.84
YIPF1Q9Y548 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.54□□□□□ -1.84
YIPF1Q9Y548 RPL7P36-201ENST00000444633 681 ntBASIC3.54□□□□□ -1.84
YIPF1Q9Y548 COX6CP2-201ENST00000444980 225 ntBASIC3.54□□□□□ -1.84
YIPF1Q9Y548 MTND1P29-201ENST00000448112 647 ntBASIC3.54□□□□□ -1.84
YIPF1Q9Y548 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.54□□□□□ -1.84
YIPF1Q9Y548 MTCO3P20-201ENST00000454926 688 ntBASIC3.54□□□□□ -1.84
YIPF1Q9Y548 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.54□□□□□ -1.84
YIPF1Q9Y548 snoU13.8-201ENST00000458890 104 ntBASIC3.54□□□□□ -1.84
YIPF1Q9Y548 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.54□□□□□ -1.84
YIPF1Q9Y548 RPS3AP50-201ENST00000487064 803 ntBASIC3.54□□□□□ -1.84
YIPF1Q9Y548 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.54□□□□□ -1.84
YIPF1Q9Y548 AC110794.1-201ENST00000505816 425 ntBASIC3.54□□□□□ -1.84
YIPF1Q9Y548 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.54□□□□□ -1.84
YIPF1Q9Y548 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.54□□□□□ -1.84
YIPF1Q9Y548 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.54□□□□□ -1.84
YIPF1Q9Y548 AC034268.2-201ENST00000571784 482 ntBASIC3.54□□□□□ -1.84
YIPF1Q9Y548 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.54□□□□□ -1.84
YIPF1Q9Y548 AC004223.2-201ENST00000590309 544 ntBASIC3.54□□□□□ -1.84
YIPF1Q9Y548 AC128687.1-201ENST00000605304 619 ntBASIC3.54□□□□□ -1.84
YIPF1Q9Y548 RN7SKP299-201ENST00000606679 301 ntBASIC3.54□□□□□ -1.84
YIPF1Q9Y548 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.54□□□□□ -1.84
YIPF1Q9Y548 AC093591.3-201ENST00000634516 308 ntBASIC3.54□□□□□ -1.84
YIPF1Q9Y548 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.54□□□□□ -1.84
YIPF1Q9Y548 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
YIPF1Q9Y548 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
YIPF1Q9Y548 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
YIPF1Q9Y548 TNPO1P3-201ENST00000436471 2662 ntBASIC3.54□□□□□ -1.84
YIPF1Q9Y548 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
YIPF1Q9Y548 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
YIPF1Q9Y548 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
YIPF1Q9Y548 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
YIPF1Q9Y548 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
YIPF1Q9Y548 RNA5SP374-201ENST00000362939 125 ntBASIC3.53□□□□□ -1.84
YIPF1Q9Y548 SNORA48.2-201ENST00000390926 124 ntBASIC3.53□□□□□ -1.84
YIPF1Q9Y548 NDUFB4P4-201ENST00000404822 243 ntBASIC3.53□□□□□ -1.84
YIPF1Q9Y548 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
YIPF1Q9Y548 RN7SKP142-201ENST00000411236 328 ntBASIC3.53□□□□□ -1.84
YIPF1Q9Y548 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.53□□□□□ -1.84
YIPF1Q9Y548 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.53□□□□□ -1.84
YIPF1Q9Y548 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.53□□□□□ -1.84
YIPF1Q9Y548 AC063979.1-201ENST00000415539 377 ntBASIC3.53□□□□□ -1.84
YIPF1Q9Y548 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms