Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.76□□□□□ -1.49
NOD1Q9Y239 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NOD1Q9Y239 RNU6-842P-201ENST00000384269 107 ntBASIC5.76□□□□□ -1.49
NOD1Q9Y239 Y_RNA.512-201ENST00000384518 102 ntBASIC5.76□□□□□ -1.49
NOD1Q9Y239 RNU6-14P-201ENST00000384630 106 ntBASIC5.76□□□□□ -1.49
NOD1Q9Y239 MIR192-201ENST00000384915 110 ntBASIC5.76□□□□□ -1.49
NOD1Q9Y239 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NOD1Q9Y239 AC011933.1-201ENST00000413334 321 ntBASIC5.76□□□□□ -1.49
NOD1Q9Y239 CEP57L1P1-201ENST00000430943 1201 ntBASIC5.76□□□□□ -1.49
NOD1Q9Y239 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.76□□□□□ -1.49
NOD1Q9Y239 H3F3BP1-201ENST00000440551 403 ntBASIC5.76□□□□□ -1.49
NOD1Q9Y239 PCNPP5-201ENST00000452246 481 ntBASIC5.76□□□□□ -1.49
NOD1Q9Y239 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.76□□□□□ -1.49
NOD1Q9Y239 AC245028.2-201ENST00000458673 253 ntBASIC5.76□□□□□ -1.49
NOD1Q9Y239 AP000797.2-201ENST00000475768 606 ntBASIC5.76□□□□□ -1.49
NOD1Q9Y239 DEFB109F-201ENST00000491870 277 ntBASIC5.76□□□□□ -1.49
NOD1Q9Y239 RN7SL591P-201ENST00000496150 292 ntBASIC5.76□□□□□ -1.49
NOD1Q9Y239 AC140172.1-201ENST00000502928 141 ntBASIC5.76□□□□□ -1.49
NOD1Q9Y239 AC107222.1-201ENST00000510899 637 ntBASIC5.76□□□□□ -1.49
NOD1Q9Y239 AC090151.1-201ENST00000520784 730 ntBASIC5.76□□□□□ -1.49
NOD1Q9Y239 AC008033.2-201ENST00000542626 177 ntBASIC5.76□□□□□ -1.49
NOD1Q9Y239 HSBP1P1-201ENST00000555205 166 ntBASIC5.76□□□□□ -1.49
NOD1Q9Y239 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC5.76□□□□□ -1.49
NOD1Q9Y239 SNORD58B-201ENST00000607313 66 ntBASIC5.76□□□□□ -1.49
NOD1Q9Y239 AC020634.1-201ENST00000608701 549 ntBASIC5.76□□□□□ -1.49
NOD1Q9Y239 uc_338.18-201ENST00000615451 175 ntBASIC5.76□□□□□ -1.49
NOD1Q9Y239 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.76□□□□□ -1.49
NOD1Q9Y239 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.76□□□□□ -1.49
NOD1Q9Y239 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NOD1Q9Y239 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.76□□□□□ -1.49
NOD1Q9Y239 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
NOD1Q9Y239 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
NOD1Q9Y239 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
NOD1Q9Y239 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NOD1Q9Y239 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NOD1Q9Y239 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
NOD1Q9Y239 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.76□□□□□ -1.49
NOD1Q9Y239 AC232271.1-201ENST00000602455 2715 ntBASIC5.76□□□□□ -1.49
NOD1Q9Y239 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NOD1Q9Y239 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.75□□□□□ -1.49
NOD1Q9Y239 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.75□□□□□ -1.49
NOD1Q9Y239 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
NOD1Q9Y239 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
NOD1Q9Y239 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NOD1Q9Y239 RN7SKP95-201ENST00000362860 303 ntBASIC5.75□□□□□ -1.49
NOD1Q9Y239 Y_RNA.152-201ENST00000363578 100 ntBASIC5.75□□□□□ -1.49
NOD1Q9Y239 RNA5SP90-201ENST00000364801 99 ntBASIC5.75□□□□□ -1.49
NOD1Q9Y239 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NOD1Q9Y239 SNORA70.9-201ENST00000384370 135 ntBASIC5.75□□□□□ -1.49
NOD1Q9Y239 AL590704.1-201ENST00000402856 794 ntBASIC5.75□□□□□ -1.49
NOD1Q9Y239 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC5.75□□□□□ -1.49
NOD1Q9Y239 MRPS18CP6-201ENST00000423587 223 ntBASIC5.75□□□□□ -1.49
NOD1Q9Y239 UBE2V1P4-201ENST00000425374 344 ntBASIC5.75□□□□□ -1.49
NOD1Q9Y239 RPS29P33-201ENST00000456717 146 ntBASIC5.75□□□□□ -1.49
NOD1Q9Y239 RNU7-187P-201ENST00000458985 68 ntBASIC5.75□□□□□ -1.49
NOD1Q9Y239 RNU6-953P-201ENST00000459154 107 ntBASIC5.75□□□□□ -1.49
NOD1Q9Y239 RPL22P13-201ENST00000493291 347 ntBASIC5.75□□□□□ -1.49
NOD1Q9Y239 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.75□□□□□ -1.49
NOD1Q9Y239 RNU6-1095P-201ENST00000516148 108 ntBASIC5.75□□□□□ -1.49
NOD1Q9Y239 AC021006.3-201ENST00000530771 192 ntBASIC5.75□□□□□ -1.49
NOD1Q9Y239 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.75□□□□□ -1.49
NOD1Q9Y239 OR4H12P-201ENST00000556269 907 ntBASIC5.75□□□□□ -1.49
NOD1Q9Y239 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.75□□□□□ -1.49
NOD1Q9Y239 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.75□□□□□ -1.49
NOD1Q9Y239 AL355297.3-201ENST00000604082 446 ntBASIC5.75□□□□□ -1.49
NOD1Q9Y239 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.75□□□□□ -1.49
NOD1Q9Y239 AC244107.2-201ENST00000611773 76 ntBASIC5.75□□□□□ -1.49
NOD1Q9Y239 AL161616.1-201ENST00000611867 286 ntBASIC5.75□□□□□ -1.49
NOD1Q9Y239 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.75□□□□□ -1.49
NOD1Q9Y239 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
NOD1Q9Y239 SMG1P6-201ENST00000532337 2930 ntBASIC5.75□□□□□ -1.49
NOD1Q9Y239 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NOD1Q9Y239 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.75□□□□□ -1.49
NOD1Q9Y239 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NOD1Q9Y239 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NOD1Q9Y239 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.75□□□□□ -1.49
NOD1Q9Y239 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.75□□□□□ -1.49
NOD1Q9Y239 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NOD1Q9Y239 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.75□□□□□ -1.49
NOD1Q9Y239 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NOD1Q9Y239 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.75□□□□□ -1.49
NOD1Q9Y239 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
NOD1Q9Y239 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.74□□□□□ -1.49
NOD1Q9Y239 AL022311.1-201ENST00000623726 19416 ntBASIC5.74□□□□□ -1.49
NOD1Q9Y239 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.74□□□□□ -1.49
NOD1Q9Y239 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.74□□□□□ -1.49
NOD1Q9Y239 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NOD1Q9Y239 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
NOD1Q9Y239 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
NOD1Q9Y239 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NOD1Q9Y239 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NOD1Q9Y239 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NOD1Q9Y239 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.74□□□□□ -1.49
NOD1Q9Y239 RNU6-1155P-201ENST00000363554 107 ntBASIC5.74□□□□□ -1.49
NOD1Q9Y239 Y_RNA.257-201ENST00000364596 102 ntBASIC5.74□□□□□ -1.49
NOD1Q9Y239 RNU6-1303P-201ENST00000364841 107 ntBASIC5.74□□□□□ -1.49
NOD1Q9Y239 Y_RNA.380-201ENST00000365663 111 ntBASIC5.74□□□□□ -1.49
NOD1Q9Y239 Y_RNA.480-201ENST00000384364 102 ntBASIC5.74□□□□□ -1.49
NOD1Q9Y239 Y_RNA.489-201ENST00000384410 101 ntBASIC5.74□□□□□ -1.49
NOD1Q9Y239 MIR517A-201ENST00000385001 87 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms