Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL17A1Q9UMD9 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.03□□□□□ -1.44
COL17A1Q9UMD9 AP001284.1-201ENST00000528393 2118 ntBASIC6.03□□□□□ -1.44
COL17A1Q9UMD9 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL17A1Q9UMD9 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL17A1Q9UMD9 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC6.03□□□□□ -1.44
COL17A1Q9UMD9 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL17A1Q9UMD9 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
COL17A1Q9UMD9 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL17A1Q9UMD9 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
COL17A1Q9UMD9 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
COL17A1Q9UMD9 RNU6-582P-201ENST00000362989 107 ntBASIC6.02□□□□□ -1.44
COL17A1Q9UMD9 RNU1-33P-201ENST00000364249 162 ntBASIC6.02□□□□□ -1.44
COL17A1Q9UMD9 Y_RNA.231-201ENST00000364358 102 ntBASIC6.02□□□□□ -1.44
COL17A1Q9UMD9 SNORA48.5-201ENST00000391143 135 ntBASIC6.02□□□□□ -1.44
COL17A1Q9UMD9 ATP5A1P2-201ENST00000412323 255 ntBASIC6.02□□□□□ -1.44
COL17A1Q9UMD9 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC6.02□□□□□ -1.44
COL17A1Q9UMD9 HMGB3P20-201ENST00000417997 600 ntBASIC6.02□□□□□ -1.44
COL17A1Q9UMD9 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC6.02□□□□□ -1.44
COL17A1Q9UMD9 RPL7P59-201ENST00000447700 943 ntBASIC6.02□□□□□ -1.44
COL17A1Q9UMD9 AC073415.1-201ENST00000449240 153 ntBASIC6.02□□□□□ -1.44
COL17A1Q9UMD9 AC108145.1-201ENST00000503770 153 ntBASIC6.02□□□□□ -1.44
COL17A1Q9UMD9 AC093311.1-201ENST00000506586 2021 ntBASIC6.02□□□□□ -1.44
COL17A1Q9UMD9 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC6.02□□□□□ -1.44
COL17A1Q9UMD9 LY96-202ENST00000518893 430 ntTSL 3 BASIC6.02□□□□□ -1.44
COL17A1Q9UMD9 AC087369.1-201ENST00000520775 996 ntBASIC6.02□□□□□ -1.44
COL17A1Q9UMD9 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC6.02□□□□□ -1.44
COL17A1Q9UMD9 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC6.02□□□□□ -1.44
COL17A1Q9UMD9 MIR5187-201ENST00000583479 76 ntBASIC6.02□□□□□ -1.44
COL17A1Q9UMD9 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.44
COL17A1Q9UMD9 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC6.02□□□□□ -1.44
COL17A1Q9UMD9 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC6.02□□□□□ -1.44
COL17A1Q9UMD9 AL080274.1-201ENST00000605565 220 ntBASIC6.02□□□□□ -1.44
COL17A1Q9UMD9 AC138627.2-201ENST00000624202 601 ntBASIC6.02□□□□□ -1.44
COL17A1Q9UMD9 AC231657.1-201ENST00000624313 397 ntBASIC6.02□□□□□ -1.44
COL17A1Q9UMD9 CRYM-AS1-204ENST00000637983 556 ntBASIC6.02□□□□□ -1.44
COL17A1Q9UMD9 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
COL17A1Q9UMD9 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC6.02□□□□□ -1.45
COL17A1Q9UMD9 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL17A1Q9UMD9 RLIMP2-201ENST00000427891 1563 ntBASIC6.02□□□□□ -1.45
COL17A1Q9UMD9 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
COL17A1Q9UMD9 AC010266.2-201ENST00000564741 3255 ntBASIC6.02□□□□□ -1.45
COL17A1Q9UMD9 Y_RNA.149-201ENST00000363558 117 ntBASIC6.02□□□□□ -1.45
COL17A1Q9UMD9 Y_RNA.291-201ENST00000364886 113 ntBASIC6.02□□□□□ -1.45
COL17A1Q9UMD9 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC6.02□□□□□ -1.45
COL17A1Q9UMD9 RPS3AP36-201ENST00000398190 775 ntBASIC6.02□□□□□ -1.45
COL17A1Q9UMD9 RN7SKP32-201ENST00000410167 303 ntBASIC6.02□□□□□ -1.45
COL17A1Q9UMD9 RNU2-64P-201ENST00000411315 191 ntBASIC6.02□□□□□ -1.45
COL17A1Q9UMD9 AL445669.1-201ENST00000426743 755 ntBASIC6.02□□□□□ -1.45
COL17A1Q9UMD9 AL358934.1-201ENST00000432346 324 ntBASIC6.02□□□□□ -1.45
COL17A1Q9UMD9 SKP1P1-201ENST00000438081 489 ntBASIC6.02□□□□□ -1.45
COL17A1Q9UMD9 RABEPKP1-201ENST00000440529 1026 ntBASIC6.02□□□□□ -1.45
COL17A1Q9UMD9 AC092809.1-201ENST00000441469 474 ntBASIC6.02□□□□□ -1.45
COL17A1Q9UMD9 RPL26P28-201ENST00000451325 435 ntBASIC6.02□□□□□ -1.45
COL17A1Q9UMD9 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.02□□□□□ -1.45
COL17A1Q9UMD9 RPL18AP17-201ENST00000455326 198 ntBASIC6.02□□□□□ -1.45
COL17A1Q9UMD9 BTF3P15-201ENST00000455606 336 ntBASIC6.02□□□□□ -1.45
COL17A1Q9UMD9 RPL23AP65-201ENST00000475608 468 ntBASIC6.02□□□□□ -1.45
COL17A1Q9UMD9 AC068587.4-201ENST00000533893 186 ntBASIC6.02□□□□□ -1.45
COL17A1Q9UMD9 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC6.02□□□□□ -1.45
COL17A1Q9UMD9 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC6.02□□□□□ -1.45
COL17A1Q9UMD9 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC6.02□□□□□ -1.45
COL17A1Q9UMD9 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC6.02□□□□□ -1.45
COL17A1Q9UMD9 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC6.02□□□□□ -1.45
COL17A1Q9UMD9 AC010200.2-201ENST00000605098 235 ntBASIC6.02□□□□□ -1.45
COL17A1Q9UMD9 RMST_3.1-201ENST00000611651 109 ntBASIC6.02□□□□□ -1.45
COL17A1Q9UMD9 uc_338.5-201ENST00000611839 155 ntBASIC6.02□□□□□ -1.45
COL17A1Q9UMD9 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
COL17A1Q9UMD9 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC6.01□□□□□ -1.45
COL17A1Q9UMD9 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL17A1Q9UMD9 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
COL17A1Q9UMD9 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.01□□□□□ -1.45
COL17A1Q9UMD9 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC6.01□□□□□ -1.45
COL17A1Q9UMD9 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC6.01□□□□□ -1.45
COL17A1Q9UMD9 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL17A1Q9UMD9 CUBN-201ENST00000377823 705 ntTSL 3 BASIC6.01□□□□□ -1.45
COL17A1Q9UMD9 RNU6-308P-201ENST00000390957 107 ntBASIC6.01□□□□□ -1.45
COL17A1Q9UMD9 RPL7P60-201ENST00000397636 735 ntBASIC6.01□□□□□ -1.45
COL17A1Q9UMD9 TXNP7-201ENST00000406296 293 ntBASIC6.01□□□□□ -1.45
COL17A1Q9UMD9 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC6.01□□□□□ -1.45
COL17A1Q9UMD9 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC6.01□□□□□ -1.45
COL17A1Q9UMD9 RPL35AP12-201ENST00000425362 338 ntBASIC6.01□□□□□ -1.45
COL17A1Q9UMD9 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC6.01□□□□□ -1.45
COL17A1Q9UMD9 TRAPPC2P2-201ENST00000517589 409 ntBASIC6.01□□□□□ -1.45
COL17A1Q9UMD9 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC6.01□□□□□ -1.45
COL17A1Q9UMD9 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC6.01□□□□□ -1.45
COL17A1Q9UMD9 AL512310.1-201ENST00000548639 172 ntBASIC6.01□□□□□ -1.45
COL17A1Q9UMD9 AC007375.1-201ENST00000554513 578 ntBASIC6.01□□□□□ -1.45
COL17A1Q9UMD9 TRAV15-201ENST00000556680 249 ntBASIC6.01□□□□□ -1.45
COL17A1Q9UMD9 RPL21P7-201ENST00000557463 483 ntBASIC6.01□□□□□ -1.45
COL17A1Q9UMD9 MIR4672-201ENST00000583126 81 ntBASIC6.01□□□□□ -1.45
COL17A1Q9UMD9 MIR432-201ENST00000606207 94 ntBASIC6.01□□□□□ -1.45
COL17A1Q9UMD9 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL17A1Q9UMD9 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC6.01□□□□□ -1.45
COL17A1Q9UMD9 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL17A1Q9UMD9 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL17A1Q9UMD9 AC116158.1-201ENST00000560231 2129 ntBASIC6.01□□□□□ -1.45
COL17A1Q9UMD9 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
COL17A1Q9UMD9 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6□□□□□ -1.45
COL17A1Q9UMD9 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms