Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.2□□□□□ -2.06
VPS29Q9UBQ0 OR4K6P-201ENST00000416478 897 ntBASIC2.2□□□□□ -2.06
VPS29Q9UBQ0 AC009963.1-201ENST00000417265 157 ntBASIC2.2□□□□□ -2.06
VPS29Q9UBQ0 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.2□□□□□ -2.06
VPS29Q9UBQ0 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC2.2□□□□□ -2.06
VPS29Q9UBQ0 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.2□□□□□ -2.06
VPS29Q9UBQ0 MTND4LP10-201ENST00000435146 291 ntBASIC2.2□□□□□ -2.06
VPS29Q9UBQ0 RPS26P30-201ENST00000443431 335 ntBASIC2.2□□□□□ -2.06
VPS29Q9UBQ0 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.2□□□□□ -2.06
VPS29Q9UBQ0 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.2□□□□□ -2.06
VPS29Q9UBQ0 AP000889.2-201ENST00000532684 490 ntBASIC2.2□□□□□ -2.06
VPS29Q9UBQ0 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.2□□□□□ -2.06
VPS29Q9UBQ0 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.2□□□□□ -2.06
VPS29Q9UBQ0 EEF1B2P4-201ENST00000551398 348 ntBASIC2.2□□□□□ -2.06
VPS29Q9UBQ0 LSM6P2-201ENST00000552208 177 ntBASIC2.2□□□□□ -2.06
VPS29Q9UBQ0 ACTR3BP3-201ENST00000565577 979 ntBASIC2.2□□□□□ -2.06
VPS29Q9UBQ0 AL390838.2-201ENST00000602394 274 ntBASIC2.2□□□□□ -2.06
VPS29Q9UBQ0 AL160281.1-201ENST00000605307 311 ntBASIC2.2□□□□□ -2.06
VPS29Q9UBQ0 AC012443.1-201ENST00000605605 231 ntBASIC2.2□□□□□ -2.06
VPS29Q9UBQ0 AP002826.1-201ENST00000608835 315 ntBASIC2.2□□□□□ -2.06
VPS29Q9UBQ0 AC011890.2-201ENST00000613393 294 ntBASIC2.2□□□□□ -2.06
VPS29Q9UBQ0 AC098679.5-201ENST00000624394 571 ntBASIC2.2□□□□□ -2.06
VPS29Q9UBQ0 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
VPS29Q9UBQ0 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
VPS29Q9UBQ0 MIRLET7G-201ENST00000362280 84 ntBASIC2.19□□□□□ -2.06
VPS29Q9UBQ0 SNORA67.1-201ENST00000364749 141 ntBASIC2.19□□□□□ -2.06
VPS29Q9UBQ0 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.19□□□□□ -2.06
VPS29Q9UBQ0 MIR144-201ENST00000384886 86 ntBASIC2.19□□□□□ -2.06
VPS29Q9UBQ0 RNA5SP354-201ENST00000391247 136 ntBASIC2.19□□□□□ -2.06
VPS29Q9UBQ0 AL031679.1-201ENST00000400616 525 ntBASIC2.19□□□□□ -2.06
VPS29Q9UBQ0 AL356057.1-202ENST00000402263 756 ntBASIC2.19□□□□□ -2.06
VPS29Q9UBQ0 ATF1P1-201ENST00000406040 927 ntBASIC2.19□□□□□ -2.06
VPS29Q9UBQ0 U3.37-201ENST00000408528 213 ntBASIC2.19□□□□□ -2.06
VPS29Q9UBQ0 AC009237.2-201ENST00000421358 284 ntBASIC2.19□□□□□ -2.06
VPS29Q9UBQ0 AC233981.1-201ENST00000423224 461 ntBASIC2.19□□□□□ -2.06
VPS29Q9UBQ0 RPL27AP8-201ENST00000424277 446 ntBASIC2.19□□□□□ -2.06
VPS29Q9UBQ0 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.19□□□□□ -2.06
VPS29Q9UBQ0 AC009414.1-201ENST00000427200 443 ntBASIC2.19□□□□□ -2.06
VPS29Q9UBQ0 AC012497.1-201ENST00000429392 575 ntBASIC2.19□□□□□ -2.06
VPS29Q9UBQ0 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC2.19□□□□□ -2.06
VPS29Q9UBQ0 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.19□□□□□ -2.06
VPS29Q9UBQ0 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.19□□□□□ -2.06
VPS29Q9UBQ0 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.19□□□□□ -2.06
VPS29Q9UBQ0 RPS15AP7-201ENST00000439294 405 ntBASIC2.19□□□□□ -2.06
VPS29Q9UBQ0 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.19□□□□□ -2.06
VPS29Q9UBQ0 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.19□□□□□ -2.06
VPS29Q9UBQ0 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC2.19□□□□□ -2.06
VPS29Q9UBQ0 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.19□□□□□ -2.06
VPS29Q9UBQ0 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.19□□□□□ -2.06
VPS29Q9UBQ0 PABPC1P3-201ENST00000469174 459 ntBASIC2.19□□□□□ -2.06
VPS29Q9UBQ0 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC2.19□□□□□ -2.06
VPS29Q9UBQ0 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.19□□□□□ -2.06
VPS29Q9UBQ0 RNA5SP82-201ENST00000516707 92 ntBASIC2.19□□□□□ -2.06
VPS29Q9UBQ0 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.19□□□□□ -2.06
VPS29Q9UBQ0 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.19□□□□□ -2.06
VPS29Q9UBQ0 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.19□□□□□ -2.06
VPS29Q9UBQ0 AC090888.1-201ENST00000561335 1141 ntBASIC2.19□□□□□ -2.06
VPS29Q9UBQ0 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.19□□□□□ -2.06
VPS29Q9UBQ0 MYL12BP1-201ENST00000569826 507 ntBASIC2.19□□□□□ -2.06
VPS29Q9UBQ0 MIR3162-201ENST00000581818 82 ntBASIC2.19□□□□□ -2.06
VPS29Q9UBQ0 AC009032.1-201ENST00000617574 431 ntBASIC2.19□□□□□ -2.06
VPS29Q9UBQ0 FRG1HP-204ENST00000617940 757 ntBASIC2.19□□□□□ -2.06
VPS29Q9UBQ0 AC007998.5-201ENST00000622938 237 ntBASIC2.19□□□□□ -2.06
VPS29Q9UBQ0 AC090617.9-201ENST00000623751 147 ntBASIC2.19□□□□□ -2.06
VPS29Q9UBQ0 AC079597.1-201ENST00000624306 508 ntBASIC2.19□□□□□ -2.06
VPS29Q9UBQ0 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.19□□□□□ -2.06
VPS29Q9UBQ0 ZNF663P-202ENST00000641770 1131 ntBASIC2.19□□□□□ -2.06
VPS29Q9UBQ0 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
VPS29Q9UBQ0 AL512283.1-201ENST00000606756 1384 ntBASIC2.19□□□□□ -2.06
VPS29Q9UBQ0 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.18□□□□□ -2.06
VPS29Q9UBQ0 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
VPS29Q9UBQ0 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
VPS29Q9UBQ0 U3.12-201ENST00000364498 214 ntBASIC2.18□□□□□ -2.06
VPS29Q9UBQ0 OR5H15-201ENST00000383696 930 ntBASIC2.18□□□□□ -2.06
VPS29Q9UBQ0 AL591416.1-201ENST00000404015 867 ntBASIC2.18□□□□□ -2.06
VPS29Q9UBQ0 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.18□□□□□ -2.06
VPS29Q9UBQ0 RPL7L1P10-201ENST00000427790 463 ntBASIC2.18□□□□□ -2.06
VPS29Q9UBQ0 AC092573.2-201ENST00000434546 243 ntBASIC2.18□□□□□ -2.06
VPS29Q9UBQ0 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.18□□□□□ -2.06
VPS29Q9UBQ0 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC2.18□□□□□ -2.06
VPS29Q9UBQ0 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.18□□□□□ -2.06
VPS29Q9UBQ0 XKRY2-201ENST00000442362 1093 ntBASIC2.18□□□□□ -2.06
VPS29Q9UBQ0 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.18□□□□□ -2.06
VPS29Q9UBQ0 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.18□□□□□ -2.06
VPS29Q9UBQ0 TTC39CP1-201ENST00000512513 755 ntBASIC2.18□□□□□ -2.06
VPS29Q9UBQ0 RNU6-1095P-201ENST00000516148 108 ntBASIC2.18□□□□□ -2.06
VPS29Q9UBQ0 SNORA31.11-201ENST00000516528 139 ntBASIC2.18□□□□□ -2.06
VPS29Q9UBQ0 AC109329.2-201ENST00000519658 482 ntBASIC2.18□□□□□ -2.06
VPS29Q9UBQ0 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC2.18□□□□□ -2.06
VPS29Q9UBQ0 CASP1P1-201ENST00000526345 212 ntBASIC2.18□□□□□ -2.06
VPS29Q9UBQ0 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
VPS29Q9UBQ0 AP001646.1-201ENST00000527936 915 ntBASIC2.18□□□□□ -2.06
VPS29Q9UBQ0 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
VPS29Q9UBQ0 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.18□□□□□ -2.06
VPS29Q9UBQ0 AC011471.1-201ENST00000585766 187 ntBASIC2.18□□□□□ -2.06
VPS29Q9UBQ0 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.18□□□□□ -2.06
VPS29Q9UBQ0 VN1R88P-201ENST00000596787 292 ntBASIC2.18□□□□□ -2.06
VPS29Q9UBQ0 AC010738.1-201ENST00000604970 987 ntBASIC2.18□□□□□ -2.06
VPS29Q9UBQ0 AC026790.2-201ENST00000606282 430 ntBASIC2.18□□□□□ -2.06
VPS29Q9UBQ0 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms