Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
CNTN3Q9P232 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CNTN3Q9P232 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
CNTN3Q9P232 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.43□□□□□ -1.54
CNTN3Q9P232 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CNTN3Q9P232 AC000374.1-201ENST00000434698 1745 ntBASIC5.43□□□□□ -1.54
CNTN3Q9P232 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.43□□□□□ -1.54
CNTN3Q9P232 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CNTN3Q9P232 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.43□□□□□ -1.54
CNTN3Q9P232 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CNTN3Q9P232 AC019155.1-201ENST00000382242 574 ntBASIC5.43□□□□□ -1.54
CNTN3Q9P232 Y_RNA.455-201ENST00000384230 98 ntBASIC5.43□□□□□ -1.54
CNTN3Q9P232 AL035079.1-201ENST00000405210 287 ntBASIC5.43□□□□□ -1.54
CNTN3Q9P232 HNRNPDLP1-201ENST00000412834 550 ntBASIC5.43□□□□□ -1.54
CNTN3Q9P232 COX6B1P1-201ENST00000415962 213 ntBASIC5.43□□□□□ -1.54
CNTN3Q9P232 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC5.43□□□□□ -1.54
CNTN3Q9P232 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC5.43□□□□□ -1.54
CNTN3Q9P232 TPT1P13-201ENST00000449760 499 ntBASIC5.43□□□□□ -1.54
CNTN3Q9P232 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC5.43□□□□□ -1.54
CNTN3Q9P232 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.43□□□□□ -1.54
CNTN3Q9P232 RN7SL319P-201ENST00000480656 221 ntBASIC5.43□□□□□ -1.54
CNTN3Q9P232 MRPS33P2-201ENST00000507850 322 ntBASIC5.43□□□□□ -1.54
CNTN3Q9P232 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC5.43□□□□□ -1.54
CNTN3Q9P232 AC026782.1-201ENST00000512952 449 ntBASIC5.43□□□□□ -1.54
CNTN3Q9P232 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.43□□□□□ -1.54
CNTN3Q9P232 RNU6-470P-201ENST00000515954 104 ntBASIC5.43□□□□□ -1.54
CNTN3Q9P232 RNU6-264P-201ENST00000517134 104 ntBASIC5.43□□□□□ -1.54
CNTN3Q9P232 AC012339.2-201ENST00000523996 453 ntBASIC5.43□□□□□ -1.54
CNTN3Q9P232 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.43□□□□□ -1.54
CNTN3Q9P232 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.43□□□□□ -1.54
CNTN3Q9P232 GNAI2P1-201ENST00000541815 315 ntBASIC5.43□□□□□ -1.54
CNTN3Q9P232 EDDM3DP-201ENST00000554692 434 ntBASIC5.43□□□□□ -1.54
CNTN3Q9P232 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC5.43□□□□□ -1.54
CNTN3Q9P232 MIR3934-201ENST00000579806 107 ntBASIC5.43□□□□□ -1.54
CNTN3Q9P232 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC5.43□□□□□ -1.54
CNTN3Q9P232 AC073539.2-201ENST00000597113 165 ntBASIC5.43□□□□□ -1.54
CNTN3Q9P232 AC006254.3-201ENST00000603353 884 ntBASIC5.43□□□□□ -1.54
CNTN3Q9P232 AC087783.2-201ENST00000605070 562 ntBASIC5.43□□□□□ -1.54
CNTN3Q9P232 AC018462.2-201ENST00000605375 395 ntBASIC5.43□□□□□ -1.54
CNTN3Q9P232 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC5.43□□□□□ -1.54
CNTN3Q9P232 AC009229.3-201ENST00000608056 282 ntBASIC5.43□□□□□ -1.54
CNTN3Q9P232 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.43□□□□□ -1.54
CNTN3Q9P232 FAM25E-202ENST00000608562 189 ntBASIC5.43□□□□□ -1.54
CNTN3Q9P232 TUG1_2.1-201ENST00000614234 87 ntBASIC5.43□□□□□ -1.54
CNTN3Q9P232 AL589994.2-201ENST00000621124 579 ntBASIC5.43□□□□□ -1.54
CNTN3Q9P232 AC110801.1-201ENST00000623590 212 ntBASIC5.43□□□□□ -1.54
CNTN3Q9P232 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CNTN3Q9P232 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CNTN3Q9P232 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CNTN3Q9P232 AL138820.1-201ENST00000617901 5305 ntBASIC5.43□□□□□ -1.54
CNTN3Q9P232 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CNTN3Q9P232 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CNTN3Q9P232 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
CNTN3Q9P232 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
CNTN3Q9P232 AC104118.1-201ENST00000607625 1589 ntBASIC5.42□□□□□ -1.54
CNTN3Q9P232 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.42□□□□□ -1.54
CNTN3Q9P232 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CNTN3Q9P232 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
CNTN3Q9P232 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CNTN3Q9P232 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CNTN3Q9P232 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CNTN3Q9P232 SMIM11P1-201ENST00000369586 178 ntBASIC5.42□□□□□ -1.54
CNTN3Q9P232 Y_RNA.574-201ENST00000384766 95 ntBASIC5.42□□□□□ -1.54
CNTN3Q9P232 MT-TC-201ENST00000387405 66 ntBASIC5.42□□□□□ -1.54
CNTN3Q9P232 SNORA16.2-201ENST00000390991 127 ntBASIC5.42□□□□□ -1.54
CNTN3Q9P232 U3.32-201ENST00000408116 212 ntBASIC5.42□□□□□ -1.54
CNTN3Q9P232 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC5.42□□□□□ -1.54
CNTN3Q9P232 MTCO3P45-201ENST00000443036 613 ntBASIC5.42□□□□□ -1.54
CNTN3Q9P232 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.42□□□□□ -1.54
CNTN3Q9P232 AC008481.1-201ENST00000463278 396 ntBASIC5.42□□□□□ -1.54
CNTN3Q9P232 AC026801.1-201ENST00000497178 464 ntBASIC5.42□□□□□ -1.54
CNTN3Q9P232 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.42□□□□□ -1.54
CNTN3Q9P232 AC116655.1-201ENST00000508324 901 ntBASIC5.42□□□□□ -1.54
CNTN3Q9P232 AC005798.1-201ENST00000513715 387 ntBASIC5.42□□□□□ -1.54
CNTN3Q9P232 RN7SKP234-201ENST00000517173 224 ntBASIC5.42□□□□□ -1.54
CNTN3Q9P232 AC009812.2-201ENST00000517657 457 ntBASIC5.42□□□□□ -1.54
CNTN3Q9P232 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CNTN3Q9P232 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.42□□□□□ -1.54
CNTN3Q9P232 CYCSP27-201ENST00000527643 293 ntBASIC5.42□□□□□ -1.54
CNTN3Q9P232 AC021006.3-201ENST00000530771 192 ntBASIC5.42□□□□□ -1.54
CNTN3Q9P232 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.42□□□□□ -1.54
CNTN3Q9P232 MIR4458-201ENST00000578872 75 ntBASIC5.42□□□□□ -1.54
CNTN3Q9P232 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC5.42□□□□□ -1.54
CNTN3Q9P232 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.42□□□□□ -1.54
CNTN3Q9P232 AC104687.2-201ENST00000604442 342 ntBASIC5.42□□□□□ -1.54
CNTN3Q9P232 DLEU2_5.1-201ENST00000615567 84 ntBASIC5.42□□□□□ -1.54
CNTN3Q9P232 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.42□□□□□ -1.54
CNTN3Q9P232 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CNTN3Q9P232 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
CNTN3Q9P232 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CNTN3Q9P232 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CNTN3Q9P232 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.42□□□□□ -1.54
CNTN3Q9P232 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.42□□□□□ -1.54
CNTN3Q9P232 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
CNTN3Q9P232 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CNTN3Q9P232 AL139811.1-201ENST00000424779 2299 ntBASIC5.41□□□□□ -1.54
CNTN3Q9P232 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CNTN3Q9P232 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CNTN3Q9P232 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.41□□□□□ -1.54
CNTN3Q9P232 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms