Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 AC024619.4-201ENST00000580924 316 ntBASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 AC012669.1-201ENST00000603209 283 ntBASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 AC091979.2-201ENST00000607514 214 ntBASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 AC104237.2-201ENST00000612456 443 ntBASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 U73479.1-201ENST00000618062 168 ntBASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 AC068831.8-201ENST00000620171 435 ntBASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 AP000346.3-201ENST00000622821 210 ntBASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 MTND4P14-201ENST00000435799 1354 ntBASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 AC015813.6-201ENST00000624409 5808 ntBASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.38□□□□□ -1.71
KCMF1Q9P0J7 AL592437.2-201ENST00000421655 2434 ntBASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 AC125257.1-201ENST00000560400 2930 ntBASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 Y_RNA.100-201ENST00000363141 102 ntBASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 SNORD115-7-201ENST00000365306 82 ntBASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 Y_RNA.394-201ENST00000383942 103 ntBASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 SNORA70F-201ENST00000384142 135 ntBASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 BX323014.1-201ENST00000412876 237 ntBASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 AL354751.2-201ENST00000415471 210 ntBASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 NCOR1P3-201ENST00000420479 303 ntBASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 AL137014.1-201ENST00000420490 1226 ntBASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 AL451054.2-201ENST00000420896 202 ntBASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 BEND7P1-201ENST00000422058 457 ntBASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 H2AFZP6-201ENST00000444403 394 ntBASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 RPL29P29-201ENST00000448725 423 ntBASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 IFNWP4-201ENST00000453148 294 ntBASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 ISCUP1-201ENST00000454451 448 ntBASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 RNU7-180P-201ENST00000459240 63 ntBASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 AC079804.1-201ENST00000461922 436 ntBASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 RN7SL459P-201ENST00000481078 302 ntBASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 AC091885.1-201ENST00000506658 268 ntBASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 MYL12AP1-201ENST00000518490 515 ntBASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 HIGD1AP5-201ENST00000529959 259 ntBASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 AC022882.1-201ENST00000532142 501 ntBASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 MIR4424-201ENST00000585257 86 ntBASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 AC234771.5-201ENST00000600161 514 ntBASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 AC005034.5-201ENST00000604219 466 ntBASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 TUG1_2.1-201ENST00000614234 87 ntBASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 uc_338.34-201ENST00000617467 174 ntBASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 C2orf27A-204ENST00000623058 969 ntBASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 U3.53-201ENST00000628922 216 ntBASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 GABPAP-201ENST00000419271 1356 ntBASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
KCMF1Q9P0J7 ZNF137P-201ENST00000456718 1920 ntBASIC4.36□□□□□ -1.71
KCMF1Q9P0J7 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.36□□□□□ -1.71
KCMF1Q9P0J7 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.36□□□□□ -1.71
KCMF1Q9P0J7 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
KCMF1Q9P0J7 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
KCMF1Q9P0J7 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
KCMF1Q9P0J7 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
KCMF1Q9P0J7 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.36□□□□□ -1.71
KCMF1Q9P0J7 EIF2AP4-201ENST00000424793 1781 ntBASIC4.36□□□□□ -1.71
KCMF1Q9P0J7 AC021146.4-201ENST00000309229 279 ntBASIC4.36□□□□□ -1.71
KCMF1Q9P0J7 SNORA63-201ENST00000363450 132 ntBASIC4.36□□□□□ -1.71
KCMF1Q9P0J7 RNU6-61P-201ENST00000365528 109 ntBASIC4.36□□□□□ -1.71
KCMF1Q9P0J7 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
KCMF1Q9P0J7 Y_RNA.576-201ENST00000384781 102 ntBASIC4.36□□□□□ -1.71
KCMF1Q9P0J7 MIR135A2-201ENST00000384854 100 ntBASIC4.36□□□□□ -1.71
KCMF1Q9P0J7 RPS4XP9-201ENST00000405151 780 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms