Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC006499.5-201ENST00000505037 514 ntBASIC3.8□□□□□ -1.8
BLOC1S4Q9NUP1 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.8□□□□□ -1.8
BLOC1S4Q9NUP1 GMPSP1-201ENST00000514075 579 ntBASIC3.8□□□□□ -1.8
BLOC1S4Q9NUP1 SNORA31.1-201ENST00000515993 133 ntBASIC3.8□□□□□ -1.8
BLOC1S4Q9NUP1 SNORA31.5-201ENST00000516190 133 ntBASIC3.8□□□□□ -1.8
BLOC1S4Q9NUP1 RNU6-711P-201ENST00000517255 106 ntBASIC3.8□□□□□ -1.8
BLOC1S4Q9NUP1 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.8□□□□□ -1.8
BLOC1S4Q9NUP1 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.8□□□□□ -1.8
BLOC1S4Q9NUP1 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.8□□□□□ -1.8
BLOC1S4Q9NUP1 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
BLOC1S4Q9NUP1 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.8□□□□□ -1.8
BLOC1S4Q9NUP1 CCNG2P1-201ENST00000549521 1000 ntBASIC3.8□□□□□ -1.8
BLOC1S4Q9NUP1 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.8□□□□□ -1.8
BLOC1S4Q9NUP1 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.8□□□□□ -1.8
BLOC1S4Q9NUP1 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.8□□□□□ -1.8
BLOC1S4Q9NUP1 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.8□□□□□ -1.8
BLOC1S4Q9NUP1 AC063944.3-201ENST00000609969 533 ntBASIC3.8□□□□□ -1.8
BLOC1S4Q9NUP1 AC013476.2-201ENST00000614456 459 ntBASIC3.8□□□□□ -1.8
BLOC1S4Q9NUP1 AC079395.3-201ENST00000615161 484 ntBASIC3.8□□□□□ -1.8
BLOC1S4Q9NUP1 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.8□□□□□ -1.8
BLOC1S4Q9NUP1 AC034229.5-201ENST00000624258 185 ntBASIC3.8□□□□□ -1.8
BLOC1S4Q9NUP1 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.8□□□□□ -1.8
BLOC1S4Q9NUP1 FAM35BP-202ENST00000497389 3337 ntBASIC3.8□□□□□ -1.8
BLOC1S4Q9NUP1 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.8□□□□□ -1.8
BLOC1S4Q9NUP1 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
BLOC1S4Q9NUP1 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.79□□□□□ -1.8
BLOC1S4Q9NUP1 AL049781.1-201ENST00000623195 3585 ntBASIC3.79□□□□□ -1.8
BLOC1S4Q9NUP1 MIR218-2-201ENST00000385006 110 ntBASIC3.79□□□□□ -1.8
BLOC1S4Q9NUP1 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
BLOC1S4Q9NUP1 ATP5F1P3-201ENST00000397213 657 ntBASIC3.79□□□□□ -1.8
BLOC1S4Q9NUP1 MTND4P13-201ENST00000402078 1023 ntBASIC3.79□□□□□ -1.8
BLOC1S4Q9NUP1 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.79□□□□□ -1.8
BLOC1S4Q9NUP1 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.79□□□□□ -1.8
BLOC1S4Q9NUP1 AC018630.2-202ENST00000422992 927 ntBASIC3.79□□□□□ -1.8
BLOC1S4Q9NUP1 NDUFB4P7-201ENST00000423198 363 ntBASIC3.79□□□□□ -1.8
BLOC1S4Q9NUP1 AC008850.1-201ENST00000427546 362 ntBASIC3.79□□□□□ -1.8
BLOC1S4Q9NUP1 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.79□□□□□ -1.8
BLOC1S4Q9NUP1 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.79□□□□□ -1.8
BLOC1S4Q9NUP1 ZNF736P8Y-201ENST00000451913 669 ntBASIC3.79□□□□□ -1.8
BLOC1S4Q9NUP1 AC097262.1-201ENST00000452559 548 ntBASIC3.79□□□□□ -1.8
BLOC1S4Q9NUP1 AC008155.2-201ENST00000464337 397 ntBASIC3.79□□□□□ -1.8
BLOC1S4Q9NUP1 AC091564.1-201ENST00000464563 479 ntBASIC3.79□□□□□ -1.8
BLOC1S4Q9NUP1 FTH1P2-201ENST00000466086 412 ntBASIC3.79□□□□□ -1.8
BLOC1S4Q9NUP1 RPL31P60-201ENST00000478450 367 ntBASIC3.79□□□□□ -1.8
BLOC1S4Q9NUP1 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.79□□□□□ -1.8
BLOC1S4Q9NUP1 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.79□□□□□ -1.8
BLOC1S4Q9NUP1 AC110768.1-201ENST00000509222 400 ntBASIC3.79□□□□□ -1.8
BLOC1S4Q9NUP1 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.79□□□□□ -1.8
BLOC1S4Q9NUP1 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.79□□□□□ -1.8
BLOC1S4Q9NUP1 AC112673.1-201ENST00000513168 575 ntBASIC3.79□□□□□ -1.8
BLOC1S4Q9NUP1 SCARNA15.2-201ENST00000516409 127 ntBASIC3.79□□□□□ -1.8
BLOC1S4Q9NUP1 SNORD59.2-201ENST00000516873 68 ntBASIC3.79□□□□□ -1.8
BLOC1S4Q9NUP1 RNU6-840P-201ENST00000517275 65 ntBASIC3.79□□□□□ -1.8
BLOC1S4Q9NUP1 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.79□□□□□ -1.8
BLOC1S4Q9NUP1 AC011602.1-201ENST00000546484 331 ntBASIC3.79□□□□□ -1.8
BLOC1S4Q9NUP1 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.79□□□□□ -1.8
BLOC1S4Q9NUP1 AC009094.1-201ENST00000564443 426 ntBASIC3.79□□□□□ -1.8
BLOC1S4Q9NUP1 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.79□□□□□ -1.8
BLOC1S4Q9NUP1 AC060771.1-201ENST00000582031 164 ntBASIC3.79□□□□□ -1.8
BLOC1S4Q9NUP1 ZNF415P1-201ENST00000582279 1166 ntBASIC3.79□□□□□ -1.8
BLOC1S4Q9NUP1 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.79□□□□□ -1.8
BLOC1S4Q9NUP1 AC245389.1-201ENST00000605141 529 ntBASIC3.79□□□□□ -1.8
BLOC1S4Q9NUP1 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.79□□□□□ -1.8
BLOC1S4Q9NUP1 AC008121.2-201ENST00000614647 523 ntBASIC3.79□□□□□ -1.8
BLOC1S4Q9NUP1 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.79□□□□□ -1.8
BLOC1S4Q9NUP1 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.79□□□□□ -1.8
BLOC1S4Q9NUP1 AC110801.1-201ENST00000623590 212 ntBASIC3.79□□□□□ -1.8
BLOC1S4Q9NUP1 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.79□□□□□ -1.8
BLOC1S4Q9NUP1 TPTE2P4-201ENST00000258589 1605 ntBASIC3.79□□□□□ -1.8
BLOC1S4Q9NUP1 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
BLOC1S4Q9NUP1 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
BLOC1S4Q9NUP1 AC005183.1-201ENST00000603687 1979 ntBASIC3.78□□□□□ -1.8
BLOC1S4Q9NUP1 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
BLOC1S4Q9NUP1 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
BLOC1S4Q9NUP1 AC012321.1-201ENST00000561622 1588 ntBASIC3.78□□□□□ -1.8
BLOC1S4Q9NUP1 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
BLOC1S4Q9NUP1 MIR184-201ENST00000384962 84 ntBASIC3.78□□□□□ -1.8
BLOC1S4Q9NUP1 RNU6-55P-201ENST00000411092 107 ntBASIC3.78□□□□□ -1.8
BLOC1S4Q9NUP1 RNU6-954P-201ENST00000411355 107 ntBASIC3.78□□□□□ -1.8
BLOC1S4Q9NUP1 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.78□□□□□ -1.8
BLOC1S4Q9NUP1 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.78□□□□□ -1.8
BLOC1S4Q9NUP1 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.78□□□□□ -1.8
BLOC1S4Q9NUP1 FAM103A2P-201ENST00000444122 354 ntBASIC3.78□□□□□ -1.8
BLOC1S4Q9NUP1 RPL36AP33-201ENST00000450395 310 ntBASIC3.78□□□□□ -1.8
BLOC1S4Q9NUP1 OR6K1P-201ENST00000456766 971 ntBASIC3.78□□□□□ -1.8
BLOC1S4Q9NUP1 RPL21P13-201ENST00000488305 481 ntBASIC3.78□□□□□ -1.8
BLOC1S4Q9NUP1 AC093663.1-201ENST00000497190 394 ntBASIC3.78□□□□□ -1.8
BLOC1S4Q9NUP1 AC112198.1-201ENST00000505369 1220 ntBASIC3.78□□□□□ -1.8
BLOC1S4Q9NUP1 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.78□□□□□ -1.8
BLOC1S4Q9NUP1 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.78□□□□□ -1.8
BLOC1S4Q9NUP1 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.78□□□□□ -1.8
BLOC1S4Q9NUP1 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.78□□□□□ -1.8
BLOC1S4Q9NUP1 MTATP6P24-201ENST00000576835 677 ntBASIC3.78□□□□□ -1.8
BLOC1S4Q9NUP1 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.78□□□□□ -1.8
BLOC1S4Q9NUP1 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.78□□□□□ -1.8
BLOC1S4Q9NUP1 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
BLOC1S4Q9NUP1 AC093838.1-201ENST00000613014 469 ntBASIC3.78□□□□□ -1.8
BLOC1S4Q9NUP1 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.78□□□□□ -1.8
BLOC1S4Q9NUP1 AP000676.3-201ENST00000623299 569 ntBASIC3.78□□□□□ -1.8
BLOC1S4Q9NUP1 AC091965.5-201ENST00000624785 342 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms