Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 RNU1-130P-201ENST00000363930 160 ntBASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 SNORA24.1-201ENST00000384401 135 ntBASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 RNU6-601P-201ENST00000384540 107 ntBASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 Y_RNA.576-201ENST00000384781 102 ntBASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 POLHP1-201ENST00000411806 470 ntBASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 RAC1P6-201ENST00000423911 575 ntBASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 SKA2P1-201ENST00000425592 390 ntBASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 MTCYBP9-201ENST00000431021 303 ntBASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 SNRPEP4-201ENST00000435815 279 ntBASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 AC105402.2-201ENST00000438503 358 ntBASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 TXNP1-201ENST00000441872 371 ntBASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 AC104058.1-201ENST00000448028 297 ntBASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 SNORD121B-201ENST00000458838 81 ntBASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 AC104806.1-201ENST00000508720 308 ntBASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 RNU6-64P-201ENST00000517119 105 ntBASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 RNU6-709P-201ENST00000517257 104 ntBASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 AL137161.1-201ENST00000532231 390 ntBASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 IMMP1LP2-201ENST00000552954 492 ntBASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 MIR3934-201ENST00000579806 107 ntBASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 AC138761.3-201ENST00000579993 334 ntBASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 MIR4680-201ENST00000580906 66 ntBASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 AC024619.4-201ENST00000580924 316 ntBASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 AC073539.2-201ENST00000597113 165 ntBASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 AL031320.1-201ENST00000604177 357 ntBASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 AL157817.1-201ENST00000614264 790 ntBASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 AC090337.1-201ENST00000579651 2074 ntBASIC4.3□□□□□ -1.72
SEC61A2Q9H9S3 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.29□□□□□ -1.72
SEC61A2Q9H9S3 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
SEC61A2Q9H9S3 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
SEC61A2Q9H9S3 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.29□□□□□ -1.72
SEC61A2Q9H9S3 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.29□□□□□ -1.72
SEC61A2Q9H9S3 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SEC61A2Q9H9S3 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
SEC61A2Q9H9S3 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
SEC61A2Q9H9S3 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.29□□□□□ -1.72
SEC61A2Q9H9S3 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
SEC61A2Q9H9S3 Y_RNA.193-201ENST00000363979 102 ntBASIC4.29□□□□□ -1.72
SEC61A2Q9H9S3 RNVU1-3-201ENST00000364313 161 ntBASIC4.29□□□□□ -1.72
SEC61A2Q9H9S3 Y_RNA.452-201ENST00000384202 108 ntBASIC4.29□□□□□ -1.72
SEC61A2Q9H9S3 RNU6-310P-201ENST00000384655 107 ntBASIC4.29□□□□□ -1.72
SEC61A2Q9H9S3 MIR937-201ENST00000401271 86 ntBASIC4.29□□□□□ -1.72
SEC61A2Q9H9S3 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.29□□□□□ -1.72
SEC61A2Q9H9S3 AC009302.1-201ENST00000417147 390 ntBASIC4.29□□□□□ -1.72
SEC61A2Q9H9S3 EIF4HP2-201ENST00000424380 563 ntBASIC4.29□□□□□ -1.72
SEC61A2Q9H9S3 RPS27P18-201ENST00000431701 247 ntBASIC4.29□□□□□ -1.72
SEC61A2Q9H9S3 AL451139.1-201ENST00000434718 346 ntBASIC4.29□□□□□ -1.72
SEC61A2Q9H9S3 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.29□□□□□ -1.72
SEC61A2Q9H9S3 AC004938.1-201ENST00000438468 308 ntBASIC4.29□□□□□ -1.72
SEC61A2Q9H9S3 AC000111.2-201ENST00000448200 210 ntBASIC4.29□□□□□ -1.72
SEC61A2Q9H9S3 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC4.29□□□□□ -1.72
SEC61A2Q9H9S3 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.29□□□□□ -1.72
SEC61A2Q9H9S3 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.29□□□□□ -1.72
SEC61A2Q9H9S3 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.29□□□□□ -1.72
SEC61A2Q9H9S3 AC079804.1-201ENST00000461922 436 ntBASIC4.29□□□□□ -1.72
SEC61A2Q9H9S3 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC4.29□□□□□ -1.72
SEC61A2Q9H9S3 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.29□□□□□ -1.72
SEC61A2Q9H9S3 AC083982.1-201ENST00000485679 344 ntBASIC4.29□□□□□ -1.72
SEC61A2Q9H9S3 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.29□□□□□ -1.72
SEC61A2Q9H9S3 OR7H2P-201ENST00000513483 306 ntBASIC4.29□□□□□ -1.72
SEC61A2Q9H9S3 RNA5SP360-201ENST00000516555 118 ntBASIC4.29□□□□□ -1.72
SEC61A2Q9H9S3 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.29□□□□□ -1.72
SEC61A2Q9H9S3 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.29□□□□□ -1.72
SEC61A2Q9H9S3 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.29□□□□□ -1.72
SEC61A2Q9H9S3 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.29□□□□□ -1.72
SEC61A2Q9H9S3 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.29□□□□□ -1.72
SEC61A2Q9H9S3 AC004817.2-201ENST00000561794 651 ntBASIC4.29□□□□□ -1.72
SEC61A2Q9H9S3 SULT1C2P2-201ENST00000562517 294 ntBASIC4.29□□□□□ -1.72
SEC61A2Q9H9S3 RN7SL176P-201ENST00000580352 264 ntBASIC4.29□□□□□ -1.72
SEC61A2Q9H9S3 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.29□□□□□ -1.72
SEC61A2Q9H9S3 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.29□□□□□ -1.72
SEC61A2Q9H9S3 AL022401.1-201ENST00000619498 108 ntBASIC4.29□□□□□ -1.72
SEC61A2Q9H9S3 AP001784.1-201ENST00000624107 428 ntBASIC4.29□□□□□ -1.72
SEC61A2Q9H9S3 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.29□□□□□ -1.72
SEC61A2Q9H9S3 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SEC61A2Q9H9S3 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
SEC61A2Q9H9S3 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 147.3 ms