Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 AC010424.1-201ENST00000506336 297 ntBASIC3.62□□□□□ -1.83
NR1H4Q96RI1 HMGB3P15-201ENST00000507326 574 ntBASIC3.62□□□□□ -1.83
NR1H4Q96RI1 RNU6-390P-201ENST00000516259 103 ntBASIC3.62□□□□□ -1.83
NR1H4Q96RI1 AP003467.2-201ENST00000520175 319 ntBASIC3.62□□□□□ -1.83
NR1H4Q96RI1 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.62□□□□□ -1.83
NR1H4Q96RI1 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
NR1H4Q96RI1 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.62□□□□□ -1.83
NR1H4Q96RI1 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.62□□□□□ -1.83
NR1H4Q96RI1 OR4H12P-201ENST00000556269 907 ntBASIC3.62□□□□□ -1.83
NR1H4Q96RI1 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.62□□□□□ -1.83
NR1H4Q96RI1 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.62□□□□□ -1.83
NR1H4Q96RI1 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.62□□□□□ -1.83
NR1H4Q96RI1 SEPT7P9-203ENST00000604116 343 ntBASIC3.62□□□□□ -1.83
NR1H4Q96RI1 AC087752.4-201ENST00000605911 462 ntBASIC3.62□□□□□ -1.83
NR1H4Q96RI1 RN7SKP299-201ENST00000606679 301 ntBASIC3.62□□□□□ -1.83
NR1H4Q96RI1 BX323046.1-201ENST00000610145 535 ntBASIC3.62□□□□□ -1.83
NR1H4Q96RI1 AC012409.3-201ENST00000611343 981 ntBASIC3.62□□□□□ -1.83
NR1H4Q96RI1 AC245517.5-201ENST00000611529 162 ntBASIC3.62□□□□□ -1.83
NR1H4Q96RI1 Mico1.1-201ENST00000611698 204 ntBASIC3.62□□□□□ -1.83
NR1H4Q96RI1 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.62□□□□□ -1.83
NR1H4Q96RI1 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
NR1H4Q96RI1 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.62□□□□□ -1.83
NR1H4Q96RI1 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
NR1H4Q96RI1 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NR1H4Q96RI1 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
NR1H4Q96RI1 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.62□□□□□ -1.83
NR1H4Q96RI1 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.62□□□□□ -1.83
NR1H4Q96RI1 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
NR1H4Q96RI1 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
NR1H4Q96RI1 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.61□□□□□ -1.83
NR1H4Q96RI1 OR5P1P-201ENST00000299512 925 ntBASIC3.61□□□□□ -1.83
NR1H4Q96RI1 AC006989.1-201ENST00000427212 131 ntBASIC3.61□□□□□ -1.83
NR1H4Q96RI1 BX890604.2-201ENST00000427883 474 ntBASIC3.61□□□□□ -1.83
NR1H4Q96RI1 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.61□□□□□ -1.83
NR1H4Q96RI1 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.61□□□□□ -1.83
NR1H4Q96RI1 AC119618.1-201ENST00000434191 222 ntBASIC3.61□□□□□ -1.83
NR1H4Q96RI1 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.61□□□□□ -1.83
NR1H4Q96RI1 TAF9P1-201ENST00000445421 515 ntBASIC3.61□□□□□ -1.83
NR1H4Q96RI1 TAF9P2-201ENST00000454958 515 ntBASIC3.61□□□□□ -1.83
NR1H4Q96RI1 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.61□□□□□ -1.83
NR1H4Q96RI1 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.61□□□□□ -1.83
NR1H4Q96RI1 AC092185.1-201ENST00000491371 97 ntBASIC3.61□□□□□ -1.83
NR1H4Q96RI1 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.61□□□□□ -1.83
NR1H4Q96RI1 AC020893.1-201ENST00000502452 580 ntBASIC3.61□□□□□ -1.83
NR1H4Q96RI1 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.61□□□□□ -1.83
NR1H4Q96RI1 MTND4P2-201ENST00000507767 1203 ntBASIC3.61□□□□□ -1.83
NR1H4Q96RI1 SNORA70.16-201ENST00000516390 95 ntBASIC3.61□□□□□ -1.83
NR1H4Q96RI1 RN7SKP92-201ENST00000517266 244 ntBASIC3.61□□□□□ -1.83
NR1H4Q96RI1 FAM60DP-201ENST00000524174 632 ntBASIC3.61□□□□□ -1.83
NR1H4Q96RI1 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.61□□□□□ -1.83
NR1H4Q96RI1 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.61□□□□□ -1.83
NR1H4Q96RI1 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.61□□□□□ -1.83
NR1H4Q96RI1 AL355836.1-201ENST00000555951 870 ntBASIC3.61□□□□□ -1.83
NR1H4Q96RI1 AC137800.2-201ENST00000574375 120 ntBASIC3.61□□□□□ -1.83
NR1H4Q96RI1 AC009977.1-201ENST00000586015 570 ntBASIC3.61□□□□□ -1.83
NR1H4Q96RI1 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.61□□□□□ -1.83
NR1H4Q96RI1 RPL12P25-202ENST00000598100 674 ntBASIC3.61□□□□□ -1.83
NR1H4Q96RI1 CKS1BP3-201ENST00000600888 237 ntBASIC3.61□□□□□ -1.83
NR1H4Q96RI1 AC015726.1-201ENST00000602353 681 ntBASIC3.61□□□□□ -1.83
NR1H4Q96RI1 AC024940.4-201ENST00000605507 246 ntBASIC3.61□□□□□ -1.83
NR1H4Q96RI1 AC093783.1-201ENST00000612976 329 ntBASIC3.61□□□□□ -1.83
NR1H4Q96RI1 AC090582.1-201ENST00000636321 199 ntBASIC3.61□□□□□ -1.83
NR1H4Q96RI1 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
NR1H4Q96RI1 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
NR1H4Q96RI1 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
NR1H4Q96RI1 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
NR1H4Q96RI1 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NR1H4Q96RI1 AC092104.1-201ENST00000497346 1441 ntBASIC3.61□□□□□ -1.83
NR1H4Q96RI1 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.61□□□□□ -1.83
NR1H4Q96RI1 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
NR1H4Q96RI1 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.6□□□□□ -1.83
NR1H4Q96RI1 AC008568.2-201ENST00000623862 2313 ntBASIC3.6□□□□□ -1.83
NR1H4Q96RI1 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.6□□□□□ -1.83
NR1H4Q96RI1 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NR1H4Q96RI1 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.6□□□□□ -1.83
NR1H4Q96RI1 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NR1H4Q96RI1 RNU1-14P-201ENST00000362759 152 ntBASIC3.6□□□□□ -1.83
NR1H4Q96RI1 SNORA36C-201ENST00000384289 132 ntBASIC3.6□□□□□ -1.83
NR1H4Q96RI1 AC110754.1-201ENST00000399740 601 ntBASIC3.6□□□□□ -1.83
NR1H4Q96RI1 AL133270.1-201ENST00000402635 279 ntBASIC3.6□□□□□ -1.83
NR1H4Q96RI1 PPIAP31-201ENST00000405422 495 ntBASIC3.6□□□□□ -1.83
NR1H4Q96RI1 RNA5SP36-201ENST00000410197 133 ntBASIC3.6□□□□□ -1.83
NR1H4Q96RI1 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.6□□□□□ -1.83
NR1H4Q96RI1 RPS3AP3-201ENST00000411933 242 ntBASIC3.6□□□□□ -1.83
NR1H4Q96RI1 YPEL5P1-201ENST00000419731 367 ntBASIC3.6□□□□□ -1.83
NR1H4Q96RI1 AL356387.2-201ENST00000422272 243 ntBASIC3.6□□□□□ -1.83
NR1H4Q96RI1 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.6□□□□□ -1.83
NR1H4Q96RI1 AC093156.1-201ENST00000440382 670 ntBASIC3.6□□□□□ -1.83
NR1H4Q96RI1 RPL21P89-201ENST00000444021 467 ntBASIC3.6□□□□□ -1.83
NR1H4Q96RI1 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.6□□□□□ -1.83
NR1H4Q96RI1 AC125238.1-201ENST00000448842 249 ntBASIC3.6□□□□□ -1.83
NR1H4Q96RI1 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.6□□□□□ -1.83
NR1H4Q96RI1 AL049874.1-201ENST00000489560 388 ntBASIC3.6□□□□□ -1.83
NR1H4Q96RI1 FCF1P3-201ENST00000496394 590 ntBASIC3.6□□□□□ -1.83
NR1H4Q96RI1 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.6□□□□□ -1.83
NR1H4Q96RI1 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.6□□□□□ -1.83
NR1H4Q96RI1 CDC42P4-201ENST00000510507 563 ntBASIC3.6□□□□□ -1.83
NR1H4Q96RI1 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.6□□□□□ -1.83
NR1H4Q96RI1 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.6□□□□□ -1.83
NR1H4Q96RI1 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms