Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.31□□□□□ -2.04
LINC00477Q96M19 RNU4-47P-201ENST00000410876 114 ntBASIC2.31□□□□□ -2.04
LINC00477Q96M19 RPL19P1-201ENST00000411635 428 ntBASIC2.31□□□□□ -2.04
LINC00477Q96M19 RPL22P18-201ENST00000417197 377 ntBASIC2.31□□□□□ -2.04
LINC00477Q96M19 AC099677.1-201ENST00000420575 175 ntBASIC2.31□□□□□ -2.04
LINC00477Q96M19 AC069157.1-201ENST00000421749 137 ntBASIC2.31□□□□□ -2.04
LINC00477Q96M19 XKRYP1-201ENST00000423438 492 ntBASIC2.31□□□□□ -2.04
LINC00477Q96M19 XKRYP2-201ENST00000432915 492 ntBASIC2.31□□□□□ -2.04
LINC00477Q96M19 AC006028.1-201ENST00000438379 402 ntBASIC2.31□□□□□ -2.04
LINC00477Q96M19 LSM1P1-201ENST00000438629 273 ntBASIC2.31□□□□□ -2.04
LINC00477Q96M19 Z73417.1-201ENST00000447373 778 ntBASIC2.31□□□□□ -2.04
LINC00477Q96M19 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.31□□□□□ -2.04
LINC00477Q96M19 TRBV26-201ENST00000456572 344 ntBASIC2.31□□□□□ -2.04
LINC00477Q96M19 PNPLA4P1-201ENST00000458328 305 ntBASIC2.31□□□□□ -2.04
LINC00477Q96M19 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.31□□□□□ -2.04
LINC00477Q96M19 RPS4XP10-201ENST00000465034 731 ntBASIC2.31□□□□□ -2.04
LINC00477Q96M19 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.31□□□□□ -2.04
LINC00477Q96M19 RN7SL633P-201ENST00000488974 297 ntBASIC2.31□□□□□ -2.04
LINC00477Q96M19 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.31□□□□□ -2.04
LINC00477Q96M19 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.31□□□□□ -2.04
LINC00477Q96M19 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.31□□□□□ -2.04
LINC00477Q96M19 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.31□□□□□ -2.04
LINC00477Q96M19 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.31□□□□□ -2.04
LINC00477Q96M19 RN7SKP287-201ENST00000516546 266 ntBASIC2.31□□□□□ -2.04
LINC00477Q96M19 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.31□□□□□ -2.04
LINC00477Q96M19 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.31□□□□□ -2.04
LINC00477Q96M19 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.31□□□□□ -2.04
LINC00477Q96M19 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.31□□□□□ -2.04
LINC00477Q96M19 AC008127.2-201ENST00000549925 1075 ntBASIC2.31□□□□□ -2.04
LINC00477Q96M19 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.31□□□□□ -2.04
LINC00477Q96M19 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.31□□□□□ -2.04
LINC00477Q96M19 DUXAP1-201ENST00000556632 463 ntBASIC2.31□□□□□ -2.04
LINC00477Q96M19 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.31□□□□□ -2.04
LINC00477Q96M19 ZNF415P1-201ENST00000582279 1166 ntBASIC2.31□□□□□ -2.04
LINC00477Q96M19 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.31□□□□□ -2.04
LINC00477Q96M19 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.31□□□□□ -2.04
LINC00477Q96M19 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.31□□□□□ -2.04
LINC00477Q96M19 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.31□□□□□ -2.04
LINC00477Q96M19 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC2.31□□□□□ -2.04
LINC00477Q96M19 AL391001.1-201ENST00000602747 715 ntBASIC2.31□□□□□ -2.04
LINC00477Q96M19 AC093424.1-201ENST00000604999 338 ntBASIC2.31□□□□□ -2.04
LINC00477Q96M19 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.31□□□□□ -2.04
LINC00477Q96M19 AC073968.1-201ENST00000618594 637 ntBASIC2.31□□□□□ -2.04
LINC00477Q96M19 AC017037.3-201ENST00000625016 472 ntBASIC2.31□□□□□ -2.04
LINC00477Q96M19 AC091925.2-201ENST00000625059 256 ntBASIC2.31□□□□□ -2.04
LINC00477Q96M19 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.31□□□□□ -2.04
LINC00477Q96M19 AC084035.1-201ENST00000634543 607 ntBASIC2.31□□□□□ -2.04
LINC00477Q96M19 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
LINC00477Q96M19 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.31□□□□□ -2.04
LINC00477Q96M19 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
LINC00477Q96M19 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
LINC00477Q96M19 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
LINC00477Q96M19 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.31□□□□□ -2.04
LINC00477Q96M19 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.31□□□□□ -2.04
LINC00477Q96M19 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
LINC00477Q96M19 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
LINC00477Q96M19 AC244517.1-201ENST00000606030 2086 ntBASIC2.3□□□□□ -2.04
LINC00477Q96M19 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
LINC00477Q96M19 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
LINC00477Q96M19 RNU6-1249P-201ENST00000363237 111 ntBASIC2.3□□□□□ -2.04
LINC00477Q96M19 U3.19-201ENST00000390893 196 ntBASIC2.3□□□□□ -2.04
LINC00477Q96M19 RNU6-952P-201ENST00000391164 108 ntBASIC2.3□□□□□ -2.04
LINC00477Q96M19 FO393413.1-201ENST00000402892 195 ntBASIC2.3□□□□□ -2.04
LINC00477Q96M19 AL024474.1-201ENST00000404655 591 ntBASIC2.3□□□□□ -2.04
LINC00477Q96M19 RNU2-25P-201ENST00000411041 191 ntBASIC2.3□□□□□ -2.04
LINC00477Q96M19 RNA5SP344-201ENST00000411081 104 ntBASIC2.3□□□□□ -2.04
LINC00477Q96M19 RPS3AP25-201ENST00000411660 793 ntBASIC2.3□□□□□ -2.04
LINC00477Q96M19 RAP1BP1-201ENST00000412709 553 ntBASIC2.3□□□□□ -2.04
LINC00477Q96M19 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.3□□□□□ -2.04
LINC00477Q96M19 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.3□□□□□ -2.04
LINC00477Q96M19 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.3□□□□□ -2.04
LINC00477Q96M19 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC2.3□□□□□ -2.04
LINC00477Q96M19 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.3□□□□□ -2.04
LINC00477Q96M19 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.3□□□□□ -2.04
LINC00477Q96M19 PSMA6P3-201ENST00000428242 164 ntBASIC2.3□□□□□ -2.04
LINC00477Q96M19 GCA-203ENST00000429691 824 ntTSL 3 BASIC2.3□□□□□ -2.04
LINC00477Q96M19 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.3□□□□□ -2.04
LINC00477Q96M19 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC2.3□□□□□ -2.04
LINC00477Q96M19 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.3□□□□□ -2.04
LINC00477Q96M19 AC092427.1-201ENST00000439177 601 ntBASIC2.3□□□□□ -2.04
LINC00477Q96M19 MTND3P1-201ENST00000441336 220 ntBASIC2.3□□□□□ -2.04
LINC00477Q96M19 UBBP3-201ENST00000445497 241 ntBASIC2.3□□□□□ -2.04
LINC00477Q96M19 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
LINC00477Q96M19 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.3□□□□□ -2.04
LINC00477Q96M19 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.3□□□□□ -2.04
LINC00477Q96M19 OR6C5P-201ENST00000452388 923 ntBASIC2.3□□□□□ -2.04
LINC00477Q96M19 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.3□□□□□ -2.04
LINC00477Q96M19 USP9YP34-201ENST00000453983 808 ntBASIC2.3□□□□□ -2.04
LINC00477Q96M19 OR6K1P-201ENST00000456766 971 ntBASIC2.3□□□□□ -2.04
LINC00477Q96M19 SNORD11.1-201ENST00000459482 85 ntBASIC2.3□□□□□ -2.04
LINC00477Q96M19 AC109925.1-201ENST00000478069 331 ntBASIC2.3□□□□□ -2.04
LINC00477Q96M19 RN7SL499P-201ENST00000481141 276 ntBASIC2.3□□□□□ -2.04
LINC00477Q96M19 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.3□□□□□ -2.04
LINC00477Q96M19 OR2A20P-203ENST00000498397 1268 ntBASIC2.3□□□□□ -2.04
LINC00477Q96M19 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.3□□□□□ -2.04
LINC00477Q96M19 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
LINC00477Q96M19 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.3□□□□□ -2.04
LINC00477Q96M19 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.3□□□□□ -2.04
LINC00477Q96M19 XKRY-201ENST00000510392 1100 ntBASIC2.3□□□□□ -2.04
LINC00477Q96M19 AC010587.2-201ENST00000511727 448 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms