Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
USP47Q96K76 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
USP47Q96K76 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.13□□□□□ -1.91
USP47Q96K76 RNA5SP99-201ENST00000364020 114 ntBASIC3.12□□□□□ -1.91
USP47Q96K76 U8.9-201ENST00000365667 134 ntBASIC3.12□□□□□ -1.91
USP47Q96K76 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
USP47Q96K76 RNA5SP181-201ENST00000410246 98 ntBASIC3.12□□□□□ -1.91
USP47Q96K76 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.12□□□□□ -1.91
USP47Q96K76 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.12□□□□□ -1.91
USP47Q96K76 NEK4P1-201ENST00000433383 879 ntBASIC3.12□□□□□ -1.91
USP47Q96K76 AC002542.1-201ENST00000440683 193 ntBASIC3.12□□□□□ -1.91
USP47Q96K76 GXYLT1P1-201ENST00000446657 490 ntBASIC3.12□□□□□ -1.91
USP47Q96K76 RPS24P6-201ENST00000452670 400 ntBASIC3.12□□□□□ -1.91
USP47Q96K76 AC092754.2-201ENST00000463506 460 ntBASIC3.12□□□□□ -1.91
USP47Q96K76 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.12□□□□□ -1.91
USP47Q96K76 RNU6-548P-201ENST00000517083 115 ntBASIC3.12□□□□□ -1.91
USP47Q96K76 SNORA31.20-201ENST00000517111 133 ntBASIC3.12□□□□□ -1.91
USP47Q96K76 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.12□□□□□ -1.91
USP47Q96K76 OR8K2P-201ENST00000524645 927 ntBASIC3.12□□□□□ -1.91
USP47Q96K76 AP000867.2-201ENST00000532468 320 ntBASIC3.12□□□□□ -1.91
USP47Q96K76 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.12□□□□□ -1.91
USP47Q96K76 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.12□□□□□ -1.91
USP47Q96K76 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.12□□□□□ -1.91
USP47Q96K76 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.12□□□□□ -1.91
USP47Q96K76 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3.12□□□□□ -1.91
USP47Q96K76 AC090116.1-201ENST00000615679 446 ntBASIC3.12□□□□□ -1.91
USP47Q96K76 AL590396.4-201ENST00000636779 956 ntBASIC3.12□□□□□ -1.91
USP47Q96K76 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
USP47Q96K76 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.12□□□□□ -1.91
USP47Q96K76 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.12□□□□□ -1.91
USP47Q96K76 ZNF72P-201ENST00000425869 1908 ntBASIC3.12□□□□□ -1.91
USP47Q96K76 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
USP47Q96K76 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
USP47Q96K76 RNA5SP258-201ENST00000362750 119 ntBASIC3.12□□□□□ -1.91
USP47Q96K76 RNU6-989P-201ENST00000362756 107 ntBASIC3.12□□□□□ -1.91
USP47Q96K76 RNU6-339P-201ENST00000384310 107 ntBASIC3.12□□□□□ -1.91
USP47Q96K76 RNU6-921P-201ENST00000384361 107 ntBASIC3.12□□□□□ -1.91
USP47Q96K76 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
USP47Q96K76 AP002784.2-201ENST00000397300 549 ntBASIC3.12□□□□□ -1.91
USP47Q96K76 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
USP47Q96K76 PTGES3P2-201ENST00000407942 482 ntBASIC3.12□□□□□ -1.91
USP47Q96K76 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.12□□□□□ -1.91
USP47Q96K76 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.12□□□□□ -1.91
USP47Q96K76 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.12□□□□□ -1.91
USP47Q96K76 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.12□□□□□ -1.91
USP47Q96K76 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.12□□□□□ -1.91
USP47Q96K76 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
USP47Q96K76 AC004263.1-201ENST00000479327 332 ntBASIC3.12□□□□□ -1.91
USP47Q96K76 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.12□□□□□ -1.91
USP47Q96K76 OR4G11P-201ENST00000492842 939 ntBASIC3.12□□□□□ -1.91
USP47Q96K76 AC112518.2-201ENST00000508565 425 ntBASIC3.12□□□□□ -1.91
USP47Q96K76 AC008716.1-201ENST00000511084 513 ntBASIC3.12□□□□□ -1.91
USP47Q96K76 AC019227.1-201ENST00000526902 510 ntBASIC3.12□□□□□ -1.91
USP47Q96K76 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC3.12□□□□□ -1.91
USP47Q96K76 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.12□□□□□ -1.91
USP47Q96K76 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.12□□□□□ -1.91
USP47Q96K76 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.12□□□□□ -1.91
USP47Q96K76 AC133794.1-201ENST00000602731 914 ntBASIC3.12□□□□□ -1.91
USP47Q96K76 AC068313.1-201ENST00000604028 1008 ntBASIC3.12□□□□□ -1.91
USP47Q96K76 AC025811.1-201ENST00000604312 472 ntBASIC3.12□□□□□ -1.91
USP47Q96K76 DPRXP5-201ENST00000604662 539 ntBASIC3.12□□□□□ -1.91
USP47Q96K76 AC004696.1-201ENST00000614345 607 ntBASIC3.12□□□□□ -1.91
USP47Q96K76 AL136981.2-201ENST00000617319 734 ntBASIC3.12□□□□□ -1.91
USP47Q96K76 AC093591.3-201ENST00000634516 308 ntBASIC3.12□□□□□ -1.91
USP47Q96K76 SGO1P1-201ENST00000603525 1447 ntBASIC3.11□□□□□ -1.91
USP47Q96K76 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
USP47Q96K76 RPL23AP47-201ENST00000408017 460 ntBASIC3.11□□□□□ -1.91
USP47Q96K76 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.11□□□□□ -1.91
USP47Q96K76 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.11□□□□□ -1.91
USP47Q96K76 AC104073.1-201ENST00000451988 151 ntBASIC3.11□□□□□ -1.91
USP47Q96K76 CDC42P1-201ENST00000456658 548 ntBASIC3.11□□□□□ -1.91
USP47Q96K76 GAPDHP39-201ENST00000481866 979 ntBASIC3.11□□□□□ -1.91
USP47Q96K76 COL6A4P2-205ENST00000509855 506 ntBASIC3.11□□□□□ -1.91
USP47Q96K76 AC004062.1-201ENST00000509926 645 ntBASIC3.11□□□□□ -1.91
USP47Q96K76 AC109471.1-201ENST00000511631 612 ntBASIC3.11□□□□□ -1.91
USP47Q96K76 Y_RNA.676-201ENST00000516393 96 ntBASIC3.11□□□□□ -1.91
USP47Q96K76 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.11□□□□□ -1.91
USP47Q96K76 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.11□□□□□ -1.91
USP47Q96K76 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.11□□□□□ -1.91
USP47Q96K76 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.11□□□□□ -1.91
USP47Q96K76 XIAPP1-201ENST00000603162 600 ntBASIC3.11□□□□□ -1.91
USP47Q96K76 AL355812.1-201ENST00000603215 216 ntBASIC3.11□□□□□ -1.91
USP47Q96K76 AC073387.2-201ENST00000604797 784 ntBASIC3.11□□□□□ -1.91
USP47Q96K76 AC026741.1-201ENST00000605892 482 ntBASIC3.11□□□□□ -1.91
USP47Q96K76 MIR8084-201ENST00000614105 89 ntBASIC3.11□□□□□ -1.91
USP47Q96K76 MIR6873-201ENST00000622788 63 ntBASIC3.11□□□□□ -1.91
USP47Q96K76 AC006963.1-201ENST00000624003 1052 ntBASIC3.11□□□□□ -1.91
USP47Q96K76 AC110994.2-201ENST00000635481 492 ntBASIC3.11□□□□□ -1.91
USP47Q96K76 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.11□□□□□ -1.91
USP47Q96K76 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
USP47Q96K76 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
USP47Q96K76 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
USP47Q96K76 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
USP47Q96K76 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.1□□□□□ -1.91
USP47Q96K76 MIR591-201ENST00000385290 95 ntBASIC3.1□□□□□ -1.91
USP47Q96K76 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.1□□□□□ -1.91
USP47Q96K76 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.1□□□□□ -1.91
USP47Q96K76 RAD23BP2-201ENST00000416003 1207 ntBASIC3.1□□□□□ -1.91
USP47Q96K76 BX664727.1-201ENST00000416024 466 ntBASIC3.1□□□□□ -1.91
USP47Q96K76 AC006548.1-201ENST00000427470 102 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 220.3 ms