Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.06□□□□□ -1.76
VPS50Q96JG6 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.06□□□□□ -1.76
VPS50Q96JG6 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
VPS50Q96JG6 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.06□□□□□ -1.76
VPS50Q96JG6 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
VPS50Q96JG6 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
VPS50Q96JG6 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
VPS50Q96JG6 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
VPS50Q96JG6 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.05□□□□□ -1.76
VPS50Q96JG6 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
VPS50Q96JG6 RNU6-821P-201ENST00000390995 107 ntBASIC4.05□□□□□ -1.76
VPS50Q96JG6 SNORA57.1-201ENST00000391227 145 ntBASIC4.05□□□□□ -1.76
VPS50Q96JG6 RNU6-628P-201ENST00000410675 107 ntBASIC4.05□□□□□ -1.76
VPS50Q96JG6 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.05□□□□□ -1.76
VPS50Q96JG6 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.05□□□□□ -1.76
VPS50Q96JG6 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.05□□□□□ -1.76
VPS50Q96JG6 AC006548.1-201ENST00000427470 102 ntBASIC4.05□□□□□ -1.76
VPS50Q96JG6 MTCO2P11-201ENST00000431069 680 ntBASIC4.05□□□□□ -1.76
VPS50Q96JG6 HSFY6P-201ENST00000445573 403 ntBASIC4.05□□□□□ -1.76
VPS50Q96JG6 RNU7-170P-201ENST00000459303 61 ntBASIC4.05□□□□□ -1.76
VPS50Q96JG6 MTCO3P38-201ENST00000468910 766 ntBASIC4.05□□□□□ -1.76
VPS50Q96JG6 AC092451.1-201ENST00000480211 153 ntBASIC4.05□□□□□ -1.76
VPS50Q96JG6 AC069499.1-201ENST00000489433 509 ntBASIC4.05□□□□□ -1.76
VPS50Q96JG6 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC4.05□□□□□ -1.76
VPS50Q96JG6 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.05□□□□□ -1.76
VPS50Q96JG6 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.05□□□□□ -1.76
VPS50Q96JG6 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.05□□□□□ -1.76
VPS50Q96JG6 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC4.05□□□□□ -1.76
VPS50Q96JG6 AC008958.1-201ENST00000511047 682 ntBASIC4.05□□□□□ -1.76
VPS50Q96JG6 RN7SKP116-201ENST00000516902 319 ntBASIC4.05□□□□□ -1.76
VPS50Q96JG6 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VPS50Q96JG6 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.05□□□□□ -1.76
VPS50Q96JG6 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.05□□□□□ -1.76
VPS50Q96JG6 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.05□□□□□ -1.76
VPS50Q96JG6 MIR3167-201ENST00000579623 85 ntBASIC4.05□□□□□ -1.76
VPS50Q96JG6 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.05□□□□□ -1.76
VPS50Q96JG6 MIR3146-201ENST00000580367 79 ntBASIC4.05□□□□□ -1.76
VPS50Q96JG6 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC4.05□□□□□ -1.76
VPS50Q96JG6 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.05□□□□□ -1.76
VPS50Q96JG6 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.05□□□□□ -1.76
VPS50Q96JG6 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
VPS50Q96JG6 AC007014.2-201ENST00000615581 479 ntBASIC4.05□□□□□ -1.76
VPS50Q96JG6 AC008785.1-201ENST00000624475 456 ntBASIC4.05□□□□□ -1.76
VPS50Q96JG6 CR381572.1-201ENST00000625098 102 ntBASIC4.05□□□□□ -1.76
VPS50Q96JG6 AC068724.3-201ENST00000625906 87 ntBASIC4.05□□□□□ -1.76
VPS50Q96JG6 OR52H1-202ENST00000641796 1061 ntBASIC4.05□□□□□ -1.76
VPS50Q96JG6 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
VPS50Q96JG6 AL158163.1-201ENST00000603915 1649 ntBASIC4.05□□□□□ -1.76
VPS50Q96JG6 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VPS50Q96JG6 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
VPS50Q96JG6 Z82217.1-201ENST00000625157 8149 ntBASIC4.04□□□□□ -1.76
VPS50Q96JG6 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VPS50Q96JG6 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VPS50Q96JG6 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VPS50Q96JG6 RNU6-181P-201ENST00000363225 107 ntBASIC4.04□□□□□ -1.76
VPS50Q96JG6 RNU1-132P-201ENST00000364300 164 ntBASIC4.04□□□□□ -1.76
VPS50Q96JG6 Y_RNA.256-201ENST00000364594 104 ntBASIC4.04□□□□□ -1.76
VPS50Q96JG6 AL590002.1-201ENST00000406554 418 ntBASIC4.04□□□□□ -1.76
VPS50Q96JG6 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.04□□□□□ -1.76
VPS50Q96JG6 RPS15AP12-201ENST00000419498 388 ntBASIC4.04□□□□□ -1.76
VPS50Q96JG6 MTND4LP11-201ENST00000422184 280 ntBASIC4.04□□□□□ -1.76
VPS50Q96JG6 UBE2V1P13-201ENST00000436983 439 ntBASIC4.04□□□□□ -1.76
VPS50Q96JG6 RAC1P7-201ENST00000445367 377 ntBASIC4.04□□□□□ -1.76
VPS50Q96JG6 MTND4P18-201ENST00000447010 465 ntBASIC4.04□□□□□ -1.76
VPS50Q96JG6 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.04□□□□□ -1.76
VPS50Q96JG6 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
VPS50Q96JG6 AC092989.1-201ENST00000481235 277 ntBASIC4.04□□□□□ -1.76
VPS50Q96JG6 AL139099.1-201ENST00000497398 403 ntBASIC4.04□□□□□ -1.76
VPS50Q96JG6 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.04□□□□□ -1.76
VPS50Q96JG6 AC019235.1-201ENST00000503847 207 ntBASIC4.04□□□□□ -1.76
VPS50Q96JG6 HMGB1P29-201ENST00000505659 499 ntBASIC4.04□□□□□ -1.76
VPS50Q96JG6 ARL4AP2-201ENST00000507378 601 ntBASIC4.04□□□□□ -1.76
VPS50Q96JG6 AC009646.1-201ENST00000510455 318 ntBASIC4.04□□□□□ -1.76
VPS50Q96JG6 SAP18P1-201ENST00000512058 390 ntBASIC4.04□□□□□ -1.76
VPS50Q96JG6 Vault.3-201ENST00000516676 95 ntBASIC4.04□□□□□ -1.76
VPS50Q96JG6 RNU6-445P-201ENST00000516949 107 ntBASIC4.04□□□□□ -1.76
VPS50Q96JG6 OR4R3P-201ENST00000525084 838 ntBASIC4.04□□□□□ -1.76
VPS50Q96JG6 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.04□□□□□ -1.76
VPS50Q96JG6 AP003385.6-201ENST00000531603 374 ntBASIC4.04□□□□□ -1.76
VPS50Q96JG6 AK6P1-201ENST00000540219 478 ntBASIC4.04□□□□□ -1.76
VPS50Q96JG6 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.04□□□□□ -1.76
VPS50Q96JG6 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.04□□□□□ -1.76
VPS50Q96JG6 MIR3160-1-201ENST00000577972 85 ntBASIC4.04□□□□□ -1.76
VPS50Q96JG6 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.04□□□□□ -1.76
VPS50Q96JG6 AC010928.3-201ENST00000587712 541 ntBASIC4.04□□□□□ -1.76
VPS50Q96JG6 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.04□□□□□ -1.76
VPS50Q96JG6 AC068790.3-201ENST00000602988 553 ntBASIC4.04□□□□□ -1.76
VPS50Q96JG6 AL391646.1-201ENST00000603860 190 ntBASIC4.04□□□□□ -1.76
VPS50Q96JG6 ZYXP1-201ENST00000617638 118 ntBASIC4.04□□□□□ -1.76
VPS50Q96JG6 MIR6891-201ENST00000618788 93 ntBASIC4.04□□□□□ -1.76
VPS50Q96JG6 AL359880.1-201ENST00000621879 266 ntBASIC4.04□□□□□ -1.76
VPS50Q96JG6 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.04□□□□□ -1.76
VPS50Q96JG6 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VPS50Q96JG6 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VPS50Q96JG6 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
VPS50Q96JG6 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
VPS50Q96JG6 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
VPS50Q96JG6 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
VPS50Q96JG6 SNORA31-201ENST00000362607 130 ntBASIC4.03□□□□□ -1.76
VPS50Q96JG6 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 174.3 ms