Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.67□□□□□ -1.66
CHMP4CQ96CF2 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.67□□□□□ -1.66
CHMP4CQ96CF2 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.67□□□□□ -1.66
CHMP4CQ96CF2 AC245505.1-201ENST00000556398 224 ntBASIC4.67□□□□□ -1.66
CHMP4CQ96CF2 HSPE1P5-201ENST00000561489 272 ntBASIC4.67□□□□□ -1.66
CHMP4CQ96CF2 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.67□□□□□ -1.66
CHMP4CQ96CF2 ZNF415P1-201ENST00000582279 1166 ntBASIC4.67□□□□□ -1.66
CHMP4CQ96CF2 NRBF2P1-201ENST00000587407 859 ntBASIC4.67□□□□□ -1.66
CHMP4CQ96CF2 AC010928.3-201ENST00000587712 541 ntBASIC4.67□□□□□ -1.66
CHMP4CQ96CF2 AP001429.1-201ENST00000602568 530 ntBASIC4.67□□□□□ -1.66
CHMP4CQ96CF2 DUXAP4-201ENST00000603046 613 ntBASIC4.67□□□□□ -1.66
CHMP4CQ96CF2 HMGB1P50-201ENST00000605814 607 ntBASIC4.67□□□□□ -1.66
CHMP4CQ96CF2 AC007038.2-201ENST00000608095 740 ntBASIC4.67□□□□□ -1.66
CHMP4CQ96CF2 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.67□□□□□ -1.66
CHMP4CQ96CF2 AC005332.10-201ENST00000612725 619 ntBASIC4.67□□□□□ -1.66
CHMP4CQ96CF2 AC091834.1-201ENST00000614543 472 ntBASIC4.67□□□□□ -1.66
CHMP4CQ96CF2 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CHMP4CQ96CF2 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.67□□□□□ -1.66
CHMP4CQ96CF2 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
CHMP4CQ96CF2 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CHMP4CQ96CF2 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CHMP4CQ96CF2 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
CHMP4CQ96CF2 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.66□□□□□ -1.66
CHMP4CQ96CF2 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CHMP4CQ96CF2 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.66□□□□□ -1.66
CHMP4CQ96CF2 RNU5A-6P-201ENST00000384136 116 ntBASIC4.66□□□□□ -1.66
CHMP4CQ96CF2 RNU6-432P-201ENST00000384196 109 ntBASIC4.66□□□□□ -1.66
CHMP4CQ96CF2 SNORA48.7-201ENST00000391302 135 ntBASIC4.66□□□□□ -1.66
CHMP4CQ96CF2 RPS3AP36-201ENST00000398190 775 ntBASIC4.66□□□□□ -1.66
CHMP4CQ96CF2 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.66□□□□□ -1.66
CHMP4CQ96CF2 RN7SKP177-201ENST00000410567 355 ntBASIC4.66□□□□□ -1.66
CHMP4CQ96CF2 RNU2-66P-201ENST00000410650 161 ntBASIC4.66□□□□□ -1.66
CHMP4CQ96CF2 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.66□□□□□ -1.66
CHMP4CQ96CF2 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.66□□□□□ -1.66
CHMP4CQ96CF2 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.66□□□□□ -1.66
CHMP4CQ96CF2 AC119618.1-201ENST00000434191 222 ntBASIC4.66□□□□□ -1.66
CHMP4CQ96CF2 RANP8-201ENST00000444720 713 ntBASIC4.66□□□□□ -1.66
CHMP4CQ96CF2 GAPDHP17-201ENST00000449858 1001 ntBASIC4.66□□□□□ -1.66
CHMP4CQ96CF2 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.66□□□□□ -1.66
CHMP4CQ96CF2 AC007967.1-201ENST00000455422 1159 ntBASIC4.66□□□□□ -1.66
CHMP4CQ96CF2 AC010285.1-201ENST00000470580 392 ntBASIC4.66□□□□□ -1.66
CHMP4CQ96CF2 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.66□□□□□ -1.66
CHMP4CQ96CF2 AC106872.2-201ENST00000494303 480 ntBASIC4.66□□□□□ -1.66
CHMP4CQ96CF2 AC138853.1-201ENST00000503549 823 ntBASIC4.66□□□□□ -1.66
CHMP4CQ96CF2 RNU2-46P-201ENST00000517038 113 ntBASIC4.66□□□□□ -1.66
CHMP4CQ96CF2 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.66□□□□□ -1.66
CHMP4CQ96CF2 AL360157.1-201ENST00000565962 87 ntBASIC4.66□□□□□ -1.66
CHMP4CQ96CF2 MIR3913-1-201ENST00000577744 102 ntBASIC4.66□□□□□ -1.66
CHMP4CQ96CF2 MIR5685-201ENST00000579080 79 ntBASIC4.66□□□□□ -1.66
CHMP4CQ96CF2 AC108747.1-201ENST00000609508 535 ntBASIC4.66□□□□□ -1.66
CHMP4CQ96CF2 AC013562.2-201ENST00000611632 603 ntBASIC4.66□□□□□ -1.66
CHMP4CQ96CF2 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.66□□□□□ -1.66
CHMP4CQ96CF2 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CHMP4CQ96CF2 AC066616.2-201ENST00000559334 1481 ntBASIC4.66□□□□□ -1.66
CHMP4CQ96CF2 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CHMP4CQ96CF2 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CHMP4CQ96CF2 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CHMP4CQ96CF2 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CHMP4CQ96CF2 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
CHMP4CQ96CF2 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.66
CHMP4CQ96CF2 AL645937.1-201ENST00000641739 1652 ntBASIC4.65□□□□□ -1.66
CHMP4CQ96CF2 U8.3-201ENST00000363321 132 ntBASIC4.65□□□□□ -1.67
CHMP4CQ96CF2 RNU5A-8P-201ENST00000364102 114 ntBASIC4.65□□□□□ -1.67
CHMP4CQ96CF2 MIR554-201ENST00000384874 96 ntBASIC4.65□□□□□ -1.67
CHMP4CQ96CF2 MIR19A-201ENST00000384878 82 ntBASIC4.65□□□□□ -1.67
CHMP4CQ96CF2 HLFP1-201ENST00000402375 499 ntBASIC4.65□□□□□ -1.67
CHMP4CQ96CF2 RNU2-43P-201ENST00000410306 190 ntBASIC4.65□□□□□ -1.67
CHMP4CQ96CF2 AL589872.1-201ENST00000426602 288 ntBASIC4.65□□□□□ -1.67
CHMP4CQ96CF2 AC010975.2-201ENST00000427781 588 ntBASIC4.65□□□□□ -1.67
CHMP4CQ96CF2 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.65□□□□□ -1.67
CHMP4CQ96CF2 AC108059.3-201ENST00000456388 214 ntBASIC4.65□□□□□ -1.67
CHMP4CQ96CF2 TMED11P-201ENST00000479478 690 ntBASIC4.65□□□□□ -1.67
CHMP4CQ96CF2 AP000926.1-201ENST00000479573 241 ntBASIC4.65□□□□□ -1.67
CHMP4CQ96CF2 RPS3AP50-201ENST00000487064 803 ntBASIC4.65□□□□□ -1.67
CHMP4CQ96CF2 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.65□□□□□ -1.67
CHMP4CQ96CF2 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.65□□□□□ -1.67
CHMP4CQ96CF2 AC022695.1-201ENST00000522089 237 ntBASIC4.65□□□□□ -1.67
CHMP4CQ96CF2 OR4T1P-201ENST00000554933 911 ntBASIC4.65□□□□□ -1.67
CHMP4CQ96CF2 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.65□□□□□ -1.67
CHMP4CQ96CF2 AC087481.2-201ENST00000565492 330 ntBASIC4.65□□□□□ -1.67
CHMP4CQ96CF2 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.65□□□□□ -1.67
CHMP4CQ96CF2 AC099489.2-201ENST00000574976 260 ntBASIC4.65□□□□□ -1.67
CHMP4CQ96CF2 MIR3146-201ENST00000580367 79 ntBASIC4.65□□□□□ -1.67
CHMP4CQ96CF2 AC087241.4-201ENST00000612441 480 ntBASIC4.65□□□□□ -1.67
CHMP4CQ96CF2 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.65□□□□□ -1.67
CHMP4CQ96CF2 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CHMP4CQ96CF2 MTND5P29-201ENST00000458676 1807 ntBASIC4.65□□□□□ -1.67
CHMP4CQ96CF2 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CHMP4CQ96CF2 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CHMP4CQ96CF2 AL157700.1-201ENST00000561973 1432 ntBASIC4.64□□□□□ -1.67
CHMP4CQ96CF2 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
CHMP4CQ96CF2 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CHMP4CQ96CF2 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CHMP4CQ96CF2 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.64□□□□□ -1.67
CHMP4CQ96CF2 RNA5SP167-201ENST00000365461 116 ntBASIC4.64□□□□□ -1.67
CHMP4CQ96CF2 RNU6-278P-201ENST00000390945 109 ntBASIC4.64□□□□□ -1.67
CHMP4CQ96CF2 RNU6-192P-201ENST00000391253 100 ntBASIC4.64□□□□□ -1.67
CHMP4CQ96CF2 SSXP9-201ENST00000417503 292 ntBASIC4.64□□□□□ -1.67
CHMP4CQ96CF2 ISCA1P6-201ENST00000427740 390 ntBASIC4.64□□□□□ -1.67
CHMP4CQ96CF2 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms