Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC233263.6-201ENST00000631132 1963 ntBASIC3.38□□□□□ -1.87
VPS33AQ96AX1 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.38□□□□□ -1.87
VPS33AQ96AX1 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
VPS33AQ96AX1 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.37□□□□□ -1.87
VPS33AQ96AX1 RNU1-101P-201ENST00000391171 127 ntBASIC3.37□□□□□ -1.87
VPS33AQ96AX1 RPL21P17-201ENST00000397467 475 ntBASIC3.37□□□□□ -1.87
VPS33AQ96AX1 AL109755.1-201ENST00000401791 649 ntBASIC3.37□□□□□ -1.87
VPS33AQ96AX1 HMGN1P24-201ENST00000412282 298 ntBASIC3.37□□□□□ -1.87
VPS33AQ96AX1 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.37□□□□□ -1.87
VPS33AQ96AX1 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
VPS33AQ96AX1 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.37□□□□□ -1.87
VPS33AQ96AX1 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.37□□□□□ -1.87
VPS33AQ96AX1 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.37□□□□□ -1.87
VPS33AQ96AX1 BX679664.1-201ENST00000434429 253 ntBASIC3.37□□□□□ -1.87
VPS33AQ96AX1 AC092573.2-201ENST00000434546 243 ntBASIC3.37□□□□□ -1.87
VPS33AQ96AX1 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.37□□□□□ -1.87
VPS33AQ96AX1 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.37□□□□□ -1.87
VPS33AQ96AX1 AL357552.1-201ENST00000445254 415 ntBASIC3.37□□□□□ -1.87
VPS33AQ96AX1 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.37□□□□□ -1.87
VPS33AQ96AX1 LINC00888-204ENST00000487386 421 ntBASIC3.37□□□□□ -1.87
VPS33AQ96AX1 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
VPS33AQ96AX1 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.37□□□□□ -1.87
VPS33AQ96AX1 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
VPS33AQ96AX1 AC010265.1-201ENST00000513509 211 ntBASIC3.37□□□□□ -1.87
VPS33AQ96AX1 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.37□□□□□ -1.87
VPS33AQ96AX1 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.37□□□□□ -1.87
VPS33AQ96AX1 RNU6-1256P-201ENST00000516539 103 ntBASIC3.37□□□□□ -1.87
VPS33AQ96AX1 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.37□□□□□ -1.87
VPS33AQ96AX1 SNORA70.19-201ENST00000516717 90 ntBASIC3.37□□□□□ -1.87
VPS33AQ96AX1 MIR2276-201ENST00000516886 89 ntBASIC3.37□□□□□ -1.87
VPS33AQ96AX1 HIGD1AP5-201ENST00000529959 259 ntBASIC3.37□□□□□ -1.87
VPS33AQ96AX1 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
VPS33AQ96AX1 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.37□□□□□ -1.87
VPS33AQ96AX1 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.37□□□□□ -1.87
VPS33AQ96AX1 MTATP6P24-201ENST00000576835 677 ntBASIC3.37□□□□□ -1.87
VPS33AQ96AX1 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.37□□□□□ -1.87
VPS33AQ96AX1 AC008751.2-201ENST00000597885 980 ntBASIC3.37□□□□□ -1.87
VPS33AQ96AX1 AL139344.1-201ENST00000605228 195 ntBASIC3.37□□□□□ -1.87
VPS33AQ96AX1 AC004908.2-201ENST00000609090 574 ntBASIC3.37□□□□□ -1.87
VPS33AQ96AX1 AC006338.2-201ENST00000616864 791 ntBASIC3.37□□□□□ -1.87
VPS33AQ96AX1 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.37□□□□□ -1.87
VPS33AQ96AX1 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.37□□□□□ -1.87
VPS33AQ96AX1 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.37□□□□□ -1.87
VPS33AQ96AX1 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
VPS33AQ96AX1 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
VPS33AQ96AX1 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
VPS33AQ96AX1 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
VPS33AQ96AX1 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
VPS33AQ96AX1 AL079305.1-201ENST00000623159 3008 ntBASIC3.36□□□□□ -1.87
VPS33AQ96AX1 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.36□□□□□ -1.87
VPS33AQ96AX1 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
VPS33AQ96AX1 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
VPS33AQ96AX1 SNORA73.2-201ENST00000364946 201 ntBASIC3.36□□□□□ -1.87
VPS33AQ96AX1 AL354719.1-201ENST00000406535 843 ntBASIC3.36□□□□□ -1.87
VPS33AQ96AX1 RNA5SP293-201ENST00000410527 113 ntBASIC3.36□□□□□ -1.87
VPS33AQ96AX1 RAP1BP1-201ENST00000412709 553 ntBASIC3.36□□□□□ -1.87
VPS33AQ96AX1 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
VPS33AQ96AX1 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
VPS33AQ96AX1 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.36□□□□□ -1.87
VPS33AQ96AX1 RPL21P40-201ENST00000428586 483 ntBASIC3.36□□□□□ -1.87
VPS33AQ96AX1 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.36□□□□□ -1.87
VPS33AQ96AX1 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.36□□□□□ -1.87
VPS33AQ96AX1 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.36□□□□□ -1.87
VPS33AQ96AX1 AL831737.1-201ENST00000441288 271 ntBASIC3.36□□□□□ -1.87
VPS33AQ96AX1 AC125238.1-201ENST00000448842 249 ntBASIC3.36□□□□□ -1.87
VPS33AQ96AX1 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.36□□□□□ -1.87
VPS33AQ96AX1 AC140076.1-201ENST00000449897 361 ntBASIC3.36□□□□□ -1.87
VPS33AQ96AX1 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.36□□□□□ -1.87
VPS33AQ96AX1 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC3.36□□□□□ -1.87
VPS33AQ96AX1 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.36□□□□□ -1.87
VPS33AQ96AX1 RPS4XP2-201ENST00000458402 793 ntBASIC3.36□□□□□ -1.87
VPS33AQ96AX1 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.36□□□□□ -1.87
VPS33AQ96AX1 RNU6-420P-201ENST00000458780 107 ntBASIC3.36□□□□□ -1.87
VPS33AQ96AX1 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.36□□□□□ -1.87
VPS33AQ96AX1 RPS20P20-201ENST00000460498 340 ntBASIC3.36□□□□□ -1.87
VPS33AQ96AX1 RN7SL594P-201ENST00000470590 287 ntBASIC3.36□□□□□ -1.87
VPS33AQ96AX1 NDUFA5P9-201ENST00000472609 340 ntBASIC3.36□□□□□ -1.87
VPS33AQ96AX1 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.36□□□□□ -1.87
VPS33AQ96AX1 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.36□□□□□ -1.87
VPS33AQ96AX1 AC112198.1-201ENST00000505369 1220 ntBASIC3.36□□□□□ -1.87
VPS33AQ96AX1 AC111000.2-201ENST00000507775 550 ntBASIC3.36□□□□□ -1.87
VPS33AQ96AX1 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.36□□□□□ -1.87
VPS33AQ96AX1 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.36□□□□□ -1.87
VPS33AQ96AX1 CDC42P4-201ENST00000510507 563 ntBASIC3.36□□□□□ -1.87
VPS33AQ96AX1 AC026402.1-201ENST00000513642 170 ntBASIC3.36□□□□□ -1.87
VPS33AQ96AX1 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.36□□□□□ -1.87
VPS33AQ96AX1 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.36□□□□□ -1.87
VPS33AQ96AX1 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.36□□□□□ -1.87
VPS33AQ96AX1 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.36□□□□□ -1.87
VPS33AQ96AX1 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.36□□□□□ -1.87
VPS33AQ96AX1 AC053481.4-201ENST00000583164 216 ntBASIC3.36□□□□□ -1.87
VPS33AQ96AX1 AC106791.2-201ENST00000604680 391 ntBASIC3.36□□□□□ -1.87
VPS33AQ96AX1 SNORA51-201ENST00000606420 132 ntBASIC3.36□□□□□ -1.87
VPS33AQ96AX1 MIR378J-201ENST00000611988 109 ntBASIC3.36□□□□□ -1.87
VPS33AQ96AX1 ZYXP1-201ENST00000617638 118 ntBASIC3.36□□□□□ -1.87
VPS33AQ96AX1 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.36□□□□□ -1.87
VPS33AQ96AX1 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.36□□□□□ -1.87
VPS33AQ96AX1 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.36□□□□□ -1.87
VPS33AQ96AX1 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.36□□□□□ -1.87
VPS33AQ96AX1 AC119674.1-207ENST00000641355 633 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms