Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 HMGN2P7-201ENST00000456186 273 ntBASIC4.08□□□□□ -1.76
ATP2A3Q93084 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.08□□□□□ -1.76
ATP2A3Q93084 SNORD42A-201ENST00000459584 64 ntBASIC4.08□□□□□ -1.76
ATP2A3Q93084 RPL7L1P8-201ENST00000469911 741 ntBASIC4.08□□□□□ -1.76
ATP2A3Q93084 VN1R17P-201ENST00000472048 1090 ntBASIC4.08□□□□□ -1.76
ATP2A3Q93084 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.08□□□□□ -1.76
ATP2A3Q93084 AC112204.1-201ENST00000502591 103 ntBASIC4.08□□□□□ -1.76
ATP2A3Q93084 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.08□□□□□ -1.76
ATP2A3Q93084 AC006390.1-201ENST00000508068 283 ntBASIC4.08□□□□□ -1.76
ATP2A3Q93084 AC010342.1-201ENST00000514047 877 ntBASIC4.08□□□□□ -1.76
ATP2A3Q93084 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.08□□□□□ -1.76
ATP2A3Q93084 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.08□□□□□ -1.76
ATP2A3Q93084 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.08□□□□□ -1.76
ATP2A3Q93084 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.08□□□□□ -1.76
ATP2A3Q93084 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.08□□□□□ -1.76
ATP2A3Q93084 YPEL5P3-201ENST00000547227 352 ntBASIC4.08□□□□□ -1.76
ATP2A3Q93084 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.08□□□□□ -1.76
ATP2A3Q93084 AC087481.2-201ENST00000565492 330 ntBASIC4.08□□□□□ -1.76
ATP2A3Q93084 AC090615.1-201ENST00000577519 154 ntBASIC4.08□□□□□ -1.76
ATP2A3Q93084 AL353997.4-201ENST00000586196 166 ntBASIC4.08□□□□□ -1.76
ATP2A3Q93084 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.08□□□□□ -1.76
ATP2A3Q93084 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.08□□□□□ -1.76
ATP2A3Q93084 AC112191.3-201ENST00000604371 277 ntBASIC4.08□□□□□ -1.76
ATP2A3Q93084 NDUFA8P1-201ENST00000605525 367 ntBASIC4.08□□□□□ -1.76
ATP2A3Q93084 AC011816.2-201ENST00000607089 556 ntBASIC4.08□□□□□ -1.76
ATP2A3Q93084 AC091965.4-201ENST00000607691 587 ntBASIC4.08□□□□□ -1.76
ATP2A3Q93084 AC006566.1-201ENST00000608943 513 ntBASIC4.08□□□□□ -1.76
ATP2A3Q93084 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
ATP2A3Q93084 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.08□□□□□ -1.76
ATP2A3Q93084 MIR486-1-201ENST00000612171 68 ntBASIC4.08□□□□□ -1.76
ATP2A3Q93084 AL591424.2-201ENST00000617023 128 ntBASIC4.08□□□□□ -1.76
ATP2A3Q93084 AL603839.4-201ENST00000624658 1005 ntBASIC4.08□□□□□ -1.76
ATP2A3Q93084 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
ATP2A3Q93084 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.08□□□□□ -1.76
ATP2A3Q93084 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
ATP2A3Q93084 AC244517.1-201ENST00000606030 2086 ntBASIC4.07□□□□□ -1.76
ATP2A3Q93084 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
ATP2A3Q93084 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ATP2A3Q93084 AC092447.7-201ENST00000422212 1621 ntBASIC4.07□□□□□ -1.76
ATP2A3Q93084 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
ATP2A3Q93084 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ATP2A3Q93084 RNA5SP124-201ENST00000362739 110 ntBASIC4.07□□□□□ -1.76
ATP2A3Q93084 RNA5SP399-201ENST00000364003 117 ntBASIC4.07□□□□□ -1.76
ATP2A3Q93084 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.07□□□□□ -1.76
ATP2A3Q93084 RNU6-348P-201ENST00000384386 107 ntBASIC4.07□□□□□ -1.76
ATP2A3Q93084 RNU1-89P-201ENST00000384592 164 ntBASIC4.07□□□□□ -1.76
ATP2A3Q93084 SNORA3.3-201ENST00000408712 125 ntBASIC4.07□□□□□ -1.76
ATP2A3Q93084 RNA5SP44-201ENST00000410446 133 ntBASIC4.07□□□□□ -1.76
ATP2A3Q93084 RNU2-15P-201ENST00000410692 191 ntBASIC4.07□□□□□ -1.76
ATP2A3Q93084 AMD1P2-201ENST00000412936 992 ntBASIC4.07□□□□□ -1.76
ATP2A3Q93084 AC069157.1-201ENST00000421749 137 ntBASIC4.07□□□□□ -1.76
ATP2A3Q93084 AL445669.1-201ENST00000426743 755 ntBASIC4.07□□□□□ -1.76
ATP2A3Q93084 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC4.07□□□□□ -1.76
ATP2A3Q93084 RPS24P6-201ENST00000452670 400 ntBASIC4.07□□□□□ -1.76
ATP2A3Q93084 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.07□□□□□ -1.76
ATP2A3Q93084 MTCO1P42-201ENST00000457379 726 ntBASIC4.07□□□□□ -1.76
ATP2A3Q93084 LARP1BP2-201ENST00000486594 519 ntBASIC4.07□□□□□ -1.76
ATP2A3Q93084 RPL7P24-201ENST00000493052 752 ntBASIC4.07□□□□□ -1.76
ATP2A3Q93084 HMGB3P15-201ENST00000507326 574 ntBASIC4.07□□□□□ -1.76
ATP2A3Q93084 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.07□□□□□ -1.76
ATP2A3Q93084 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.07□□□□□ -1.76
ATP2A3Q93084 AC093853.1-201ENST00000515689 483 ntBASIC4.07□□□□□ -1.76
ATP2A3Q93084 RN7SKP298-201ENST00000515950 94 ntBASIC4.07□□□□□ -1.76
ATP2A3Q93084 AC022878.1-201ENST00000530684 149 ntBASIC4.07□□□□□ -1.76
ATP2A3Q93084 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.07□□□□□ -1.76
ATP2A3Q93084 AC087883.1-201ENST00000551882 391 ntBASIC4.07□□□□□ -1.76
ATP2A3Q93084 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC4.07□□□□□ -1.76
ATP2A3Q93084 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.07□□□□□ -1.76
ATP2A3Q93084 AL589743.7-201ENST00000612637 233 ntBASIC4.07□□□□□ -1.76
ATP2A3Q93084 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.07□□□□□ -1.76
ATP2A3Q93084 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.07□□□□□ -1.76
ATP2A3Q93084 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ATP2A3Q93084 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ATP2A3Q93084 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
ATP2A3Q93084 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ATP2A3Q93084 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ATP2A3Q93084 AL049780.3-201ENST00000624612 1583 ntBASIC4.06□□□□□ -1.76
ATP2A3Q93084 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ATP2A3Q93084 AL133383.2-201ENST00000622958 2336 ntBASIC4.06□□□□□ -1.76
ATP2A3Q93084 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
ATP2A3Q93084 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.06□□□□□ -1.76
ATP2A3Q93084 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.06□□□□□ -1.76
ATP2A3Q93084 SNORA71.3-201ENST00000362582 128 ntBASIC4.06□□□□□ -1.76
ATP2A3Q93084 RNU6-853P-201ENST00000364306 107 ntBASIC4.06□□□□□ -1.76
ATP2A3Q93084 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.06□□□□□ -1.76
ATP2A3Q93084 AL356421.1-201ENST00000403255 413 ntBASIC4.06□□□□□ -1.76
ATP2A3Q93084 RNU6ATAC25P-201ENST00000408798 117 ntBASIC4.06□□□□□ -1.76
ATP2A3Q93084 RNU2-71P-201ENST00000411395 189 ntBASIC4.06□□□□□ -1.76
ATP2A3Q93084 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.06□□□□□ -1.76
ATP2A3Q93084 MTND1P21-201ENST00000412991 285 ntBASIC4.06□□□□□ -1.76
ATP2A3Q93084 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.06□□□□□ -1.76
ATP2A3Q93084 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.06□□□□□ -1.76
ATP2A3Q93084 RPL30P16-201ENST00000419341 429 ntBASIC4.06□□□□□ -1.76
ATP2A3Q93084 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.06□□□□□ -1.76
ATP2A3Q93084 OR2B8P-201ENST00000432841 938 ntBASIC4.06□□□□□ -1.76
ATP2A3Q93084 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.06□□□□□ -1.76
ATP2A3Q93084 RPL22P17-201ENST00000438729 315 ntBASIC4.06□□□□□ -1.76
ATP2A3Q93084 AF228730.2-201ENST00000438784 848 ntBASIC4.06□□□□□ -1.76
ATP2A3Q93084 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.06□□□□□ -1.76
ATP2A3Q93084 AL353572.1-201ENST00000442490 417 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms