Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AL079342.2-201ENST00000403367 482 ntBASIC3.63□□□□□ -1.83
SNED1Q8TER0 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.63□□□□□ -1.83
SNED1Q8TER0 OR2B8P-201ENST00000432841 938 ntBASIC3.63□□□□□ -1.83
SNED1Q8TER0 NEK4P1-201ENST00000433383 879 ntBASIC3.63□□□□□ -1.83
SNED1Q8TER0 RPL7P36-201ENST00000444633 681 ntBASIC3.63□□□□□ -1.83
SNED1Q8TER0 AL035407.2-201ENST00000454090 378 ntBASIC3.63□□□□□ -1.83
SNED1Q8TER0 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.63□□□□□ -1.83
SNED1Q8TER0 HMGB3P30-201ENST00000457863 606 ntBASIC3.63□□□□□ -1.83
SNED1Q8TER0 RNU6-956P-201ENST00000458868 103 ntBASIC3.63□□□□□ -1.83
SNED1Q8TER0 AC146507.1-201ENST00000468335 354 ntBASIC3.63□□□□□ -1.83
SNED1Q8TER0 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.63□□□□□ -1.83
SNED1Q8TER0 SNX5P1-201ENST00000505757 1041 ntBASIC3.63□□□□□ -1.83
SNED1Q8TER0 AC008549.1-201ENST00000512900 643 ntBASIC3.63□□□□□ -1.83
SNED1Q8TER0 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.63□□□□□ -1.83
SNED1Q8TER0 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.63□□□□□ -1.83
SNED1Q8TER0 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.63□□□□□ -1.83
SNED1Q8TER0 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
SNED1Q8TER0 AP000873.5-201ENST00000533906 236 ntBASIC3.63□□□□□ -1.83
SNED1Q8TER0 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.63□□□□□ -1.83
SNED1Q8TER0 AC068135.2-201ENST00000569293 1028 ntBASIC3.63□□□□□ -1.83
SNED1Q8TER0 AC074051.3-201ENST00000570238 358 ntBASIC3.63□□□□□ -1.83
SNED1Q8TER0 AC138761.3-201ENST00000579993 334 ntBASIC3.63□□□□□ -1.83
SNED1Q8TER0 AC136601.2-201ENST00000604356 474 ntBASIC3.63□□□□□ -1.83
SNED1Q8TER0 AC007619.2-201ENST00000605743 379 ntBASIC3.63□□□□□ -1.83
SNED1Q8TER0 AC069234.5-201ENST00000611056 416 ntBASIC3.63□□□□□ -1.83
SNED1Q8TER0 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SNED1Q8TER0 AC121761.2-201ENST00000617300 689 ntBASIC3.63□□□□□ -1.83
SNED1Q8TER0 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
SNED1Q8TER0 IGHVIII-44-202ENST00000636235 289 ntBASIC3.63□□□□□ -1.83
SNED1Q8TER0 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
SNED1Q8TER0 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.63□□□□□ -1.83
SNED1Q8TER0 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SNED1Q8TER0 AC073055.1-201ENST00000456901 1621 ntBASIC3.63□□□□□ -1.83
SNED1Q8TER0 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SNED1Q8TER0 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SNED1Q8TER0 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
SNED1Q8TER0 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.62□□□□□ -1.83
SNED1Q8TER0 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SNED1Q8TER0 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SNED1Q8TER0 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
SNED1Q8TER0 RNU6-560P-201ENST00000364007 108 ntBASIC3.62□□□□□ -1.83
SNED1Q8TER0 RNU6-98P-201ENST00000384173 107 ntBASIC3.62□□□□□ -1.83
SNED1Q8TER0 AL592148.1-201ENST00000413568 445 ntBASIC3.62□□□□□ -1.83
SNED1Q8TER0 AC004987.3-201ENST00000413879 771 ntBASIC3.62□□□□□ -1.83
SNED1Q8TER0 DPRXP1-201ENST00000426312 460 ntBASIC3.62□□□□□ -1.83
SNED1Q8TER0 AC063976.3-201ENST00000426849 329 ntBASIC3.62□□□□□ -1.83
SNED1Q8TER0 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.62□□□□□ -1.83
SNED1Q8TER0 ATP5F1P1-201ENST00000433775 569 ntBASIC3.62□□□□□ -1.83
SNED1Q8TER0 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.62□□□□□ -1.83
SNED1Q8TER0 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.62□□□□□ -1.83
SNED1Q8TER0 AC004801.2-202ENST00000463559 283 ntBASIC3.62□□□□□ -1.83
SNED1Q8TER0 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.62□□□□□ -1.83
SNED1Q8TER0 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SNED1Q8TER0 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SNED1Q8TER0 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.62□□□□□ -1.83
SNED1Q8TER0 AC005178.1-201ENST00000508392 440 ntBASIC3.62□□□□□ -1.83
SNED1Q8TER0 AC022447.1-201ENST00000515358 464 ntBASIC3.62□□□□□ -1.83
SNED1Q8TER0 RNU6-1178P-201ENST00000516674 107 ntBASIC3.62□□□□□ -1.83
SNED1Q8TER0 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.62□□□□□ -1.83
SNED1Q8TER0 MTND4LP18-201ENST00000526864 291 ntBASIC3.62□□□□□ -1.83
SNED1Q8TER0 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.62□□□□□ -1.83
SNED1Q8TER0 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.62□□□□□ -1.83
SNED1Q8TER0 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.62□□□□□ -1.83
SNED1Q8TER0 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.62□□□□□ -1.83
SNED1Q8TER0 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.62□□□□□ -1.83
SNED1Q8TER0 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.62□□□□□ -1.83
SNED1Q8TER0 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.62□□□□□ -1.83
SNED1Q8TER0 AC245505.1-201ENST00000556398 224 ntBASIC3.62□□□□□ -1.83
SNED1Q8TER0 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.62□□□□□ -1.83
SNED1Q8TER0 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.62□□□□□ -1.83
SNED1Q8TER0 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.62□□□□□ -1.83
SNED1Q8TER0 EIF1P4-201ENST00000572664 335 ntBASIC3.62□□□□□ -1.83
SNED1Q8TER0 AP001542.2-201ENST00000593141 364 ntBASIC3.62□□□□□ -1.83
SNED1Q8TER0 AC007566.2-201ENST00000603642 413 ntBASIC3.62□□□□□ -1.83
SNED1Q8TER0 AL136363.2-201ENST00000604173 851 ntBASIC3.62□□□□□ -1.83
SNED1Q8TER0 AC108747.1-201ENST00000609508 535 ntBASIC3.62□□□□□ -1.83
SNED1Q8TER0 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.62□□□□□ -1.83
SNED1Q8TER0 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.62□□□□□ -1.83
SNED1Q8TER0 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.62□□□□□ -1.83
SNED1Q8TER0 MIR4278-201ENST00000636094 69 ntBASIC3.62□□□□□ -1.83
SNED1Q8TER0 AC099654.13-201ENST00000639774 207 ntBASIC3.62□□□□□ -1.83
SNED1Q8TER0 NSRP1P1-201ENST00000444067 1693 ntBASIC3.62□□□□□ -1.83
SNED1Q8TER0 AP000776.1-201ENST00000530032 1663 ntBASIC3.62□□□□□ -1.83
SNED1Q8TER0 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.62□□□□□ -1.83
SNED1Q8TER0 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.62□□□□□ -1.83
SNED1Q8TER0 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.62□□□□□ -1.83
SNED1Q8TER0 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SNED1Q8TER0 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
SNED1Q8TER0 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SNED1Q8TER0 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SNED1Q8TER0 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
SNED1Q8TER0 U3.4-201ENST00000363352 213 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 RNU6-356P-201ENST00000384140 107 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 RNU6-851P-201ENST00000384565 107 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 MIR34A-201ENST00000385130 110 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 MIR1261-201ENST00000408659 82 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 RNU2-16P-201ENST00000410712 136 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 USP9YP33-201ENST00000412220 421 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 MRPL50P2-201ENST00000416821 482 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 LINC01347-201ENST00000417964 355 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms