Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.3□□□□□ -2.2
ALMS1Q8TCU4 AC012360.2-201ENST00000609349 391 ntBASIC1.3□□□□□ -2.2
ALMS1Q8TCU4 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.3□□□□□ -2.2
ALMS1Q8TCU4 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
ALMS1Q8TCU4 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
ALMS1Q8TCU4 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
ALMS1Q8TCU4 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
ALMS1Q8TCU4 AC009237.2-201ENST00000421358 284 ntBASIC1.3□□□□□ -2.2
ALMS1Q8TCU4 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.3□□□□□ -2.2
ALMS1Q8TCU4 RPL17P49-201ENST00000443728 411 ntBASIC1.3□□□□□ -2.2
ALMS1Q8TCU4 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC1.3□□□□□ -2.2
ALMS1Q8TCU4 Z96811.1-201ENST00000445880 108 ntBASIC1.3□□□□□ -2.2
ALMS1Q8TCU4 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.3□□□□□ -2.2
ALMS1Q8TCU4 SSXP4-201ENST00000451349 245 ntBASIC1.3□□□□□ -2.2
ALMS1Q8TCU4 NAMPTP2-201ENST00000505629 1115 ntBASIC1.3□□□□□ -2.2
ALMS1Q8TCU4 HMGB3P15-201ENST00000507326 574 ntBASIC1.3□□□□□ -2.2
ALMS1Q8TCU4 AC087373.1-201ENST00000524920 491 ntBASIC1.3□□□□□ -2.2
ALMS1Q8TCU4 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.3□□□□□ -2.2
ALMS1Q8TCU4 VIS1.1-201ENST00000610517 203 ntBASIC1.3□□□□□ -2.2
ALMS1Q8TCU4 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC1.3□□□□□ -2.2
ALMS1Q8TCU4 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC1.3□□□□□ -2.2
ALMS1Q8TCU4 RNU6-356P-201ENST00000384140 107 ntBASIC1.29□□□□□ -2.2
ALMS1Q8TCU4 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.29□□□□□ -2.2
ALMS1Q8TCU4 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.29□□□□□ -2.2
ALMS1Q8TCU4 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC1.29□□□□□ -2.2
ALMS1Q8TCU4 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
ALMS1Q8TCU4 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC1.29□□□□□ -2.2
ALMS1Q8TCU4 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
ALMS1Q8TCU4 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC1.29□□□□□ -2.2
ALMS1Q8TCU4 USP9YP6-201ENST00000413550 854 ntBASIC1.29□□□□□ -2.2
ALMS1Q8TCU4 USP9YP34-201ENST00000453983 808 ntBASIC1.29□□□□□ -2.2
ALMS1Q8TCU4 AC010683.1-201ENST00000473673 378 ntBASIC1.29□□□□□ -2.2
ALMS1Q8TCU4 HMGN2P13-201ENST00000476476 274 ntBASIC1.29□□□□□ -2.2
ALMS1Q8TCU4 CBX3P4-201ENST00000538909 354 ntBASIC1.29□□□□□ -2.2
ALMS1Q8TCU4 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.29□□□□□ -2.2
ALMS1Q8TCU4 AC120053.1-201ENST00000607706 736 ntBASIC1.29□□□□□ -2.2
ALMS1Q8TCU4 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
ALMS1Q8TCU4 AC093536.2-201ENST00000565257 1406 ntBASIC1.29□□□□□ -2.2
ALMS1Q8TCU4 USP9YP27-201ENST00000418455 438 ntBASIC1.29□□□□□ -2.2
ALMS1Q8TCU4 RN7SKP34-201ENST00000516142 244 ntBASIC1.29□□□□□ -2.2
ALMS1Q8TCU4 COX6CP5-201ENST00000527162 228 ntBASIC1.29□□□□□ -2.2
ALMS1Q8TCU4 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC1.29□□□□□ -2.2
ALMS1Q8TCU4 LLPHP1-201ENST00000603571 367 ntBASIC1.29□□□□□ -2.2
ALMS1Q8TCU4 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.29□□□□□ -2.2
ALMS1Q8TCU4 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.29□□□□□ -2.2
ALMS1Q8TCU4 RNA5SP338-201ENST00000410495 85 ntBASIC1.29□□□□□ -2.2
ALMS1Q8TCU4 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC1.29□□□□□ -2.2
ALMS1Q8TCU4 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.29□□□□□ -2.2
ALMS1Q8TCU4 MTND4LP13-201ENST00000425022 298 ntBASIC1.29□□□□□ -2.2
ALMS1Q8TCU4 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.29□□□□□ -2.2
ALMS1Q8TCU4 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC1.29□□□□□ -2.2
ALMS1Q8TCU4 MTCO1P47-201ENST00000523889 1271 ntBASIC1.29□□□□□ -2.2
ALMS1Q8TCU4 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.29□□□□□ -2.2
ALMS1Q8TCU4 LRRC37A5P-203ENST00000580181 585 ntBASIC1.29□□□□□ -2.2
ALMS1Q8TCU4 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.29□□□□□ -2.2
ALMS1Q8TCU4 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.29□□□□□ -2.2
ALMS1Q8TCU4 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC1.28□□□□□ -2.2
ALMS1Q8TCU4 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
ALMS1Q8TCU4 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
ALMS1Q8TCU4 TRIM60P8Y-201ENST00000436338 762 ntBASIC1.28□□□□□ -2.2
ALMS1Q8TCU4 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.28□□□□□ -2.2
ALMS1Q8TCU4 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.28□□□□□ -2.2
ALMS1Q8TCU4 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC1.28□□□□□ -2.2
ALMS1Q8TCU4 LTV1P1-201ENST00000510683 1237 ntBASIC1.28□□□□□ -2.2
ALMS1Q8TCU4 RN7SL622P-201ENST00000585292 275 ntBASIC1.28□□□□□ -2.2
ALMS1Q8TCU4 AP001029.3-201ENST00000588063 596 ntBASIC1.28□□□□□ -2.2
ALMS1Q8TCU4 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
ALMS1Q8TCU4 SNORA48.3-201ENST00000391081 134 ntBASIC1.28□□□□□ -2.2
ALMS1Q8TCU4 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.28□□□□□ -2.2
ALMS1Q8TCU4 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
ALMS1Q8TCU4 AC025281.1-201ENST00000567026 265 ntBASIC1.28□□□□□ -2.2
ALMS1Q8TCU4 AP001180.3-201ENST00000582221 145 ntBASIC1.28□□□□□ -2.2
ALMS1Q8TCU4 AC007620.3-201ENST00000608131 497 ntBASIC1.28□□□□□ -2.2
ALMS1Q8TCU4 ZNF734P-201ENST00000419494 1534 ntBASIC1.28□□□□□ -2.2
ALMS1Q8TCU4 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
ALMS1Q8TCU4 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.28□□□□□ -2.2
ALMS1Q8TCU4 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.28□□□□□ -2.2
ALMS1Q8TCU4 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC1.28□□□□□ -2.2
ALMS1Q8TCU4 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.28□□□□□ -2.2
ALMS1Q8TCU4 RNU6-799P-201ENST00000363567 107 ntBASIC1.28□□□□□ -2.21
ALMS1Q8TCU4 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.28□□□□□ -2.21
ALMS1Q8TCU4 AC240504.1-201ENST00000395709 845 ntBASIC1.28□□□□□ -2.21
ALMS1Q8TCU4 RNU2-71P-201ENST00000411395 189 ntBASIC1.28□□□□□ -2.21
ALMS1Q8TCU4 AC008173.1-201ENST00000418901 264 ntBASIC1.28□□□□□ -2.21
ALMS1Q8TCU4 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.28□□□□□ -2.21
ALMS1Q8TCU4 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC1.28□□□□□ -2.21
ALMS1Q8TCU4 OR52A4P-203ENST00000498233 1014 ntBASIC1.28□□□□□ -2.21
ALMS1Q8TCU4 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.28□□□□□ -2.21
ALMS1Q8TCU4 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC1.28□□□□□ -2.21
ALMS1Q8TCU4 AC113368.1-201ENST00000603736 382 ntBASIC1.28□□□□□ -2.21
ALMS1Q8TCU4 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC1.28□□□□□ -2.21
ALMS1Q8TCU4 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.28□□□□□ -2.21
ALMS1Q8TCU4 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.27□□□□□ -2.21
ALMS1Q8TCU4 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
ALMS1Q8TCU4 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
ALMS1Q8TCU4 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.27□□□□□ -2.21
ALMS1Q8TCU4 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.27□□□□□ -2.21
ALMS1Q8TCU4 RPL23AP41-201ENST00000484754 458 ntBASIC1.27□□□□□ -2.21
ALMS1Q8TCU4 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.27□□□□□ -2.21
ALMS1Q8TCU4 C1GALT1P1-201ENST00000548895 1089 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms