Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 AC007954.1-201ENST00000554198 494 ntBASIC2.37□□□□□ -2.03
LINC01560Q8TB33 HIGD1AP17-201ENST00000554576 276 ntBASIC2.37□□□□□ -2.03
LINC01560Q8TB33 AC091057.3-201ENST00000602684 733 ntBASIC2.37□□□□□ -2.03
LINC01560Q8TB33 AC136601.2-201ENST00000604356 474 ntBASIC2.37□□□□□ -2.03
LINC01560Q8TB33 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.37□□□□□ -2.03
LINC01560Q8TB33 AC107294.3-201ENST00000609211 526 ntBASIC2.37□□□□□ -2.03
LINC01560Q8TB33 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.37□□□□□ -2.03
LINC01560Q8TB33 AL445984.1-201ENST00000637834 659 ntBASIC2.37□□□□□ -2.03
LINC01560Q8TB33 MIR1322-201ENST00000638013 71 ntBASIC2.37□□□□□ -2.03
LINC01560Q8TB33 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
LINC01560Q8TB33 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
LINC01560Q8TB33 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.37□□□□□ -2.03
LINC01560Q8TB33 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
LINC01560Q8TB33 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.36□□□□□ -2.03
LINC01560Q8TB33 AP002907.1-201ENST00000606361 1430 ntBASIC2.36□□□□□ -2.03
LINC01560Q8TB33 AC091152.2-201ENST00000591628 2569 ntBASIC2.36□□□□□ -2.03
LINC01560Q8TB33 RNU6-1074P-201ENST00000383995 104 ntBASIC2.36□□□□□ -2.03
LINC01560Q8TB33 RNU6-878P-201ENST00000384578 110 ntBASIC2.36□□□□□ -2.03
LINC01560Q8TB33 MIR1261-201ENST00000408659 82 ntBASIC2.36□□□□□ -2.03
LINC01560Q8TB33 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.36□□□□□ -2.03
LINC01560Q8TB33 RN7SKP58-201ENST00000411010 305 ntBASIC2.36□□□□□ -2.03
LINC01560Q8TB33 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.36□□□□□ -2.03
LINC01560Q8TB33 AC099677.1-201ENST00000420575 175 ntBASIC2.36□□□□□ -2.03
LINC01560Q8TB33 RPL7P30-201ENST00000420888 709 ntBASIC2.36□□□□□ -2.03
LINC01560Q8TB33 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.36□□□□□ -2.03
LINC01560Q8TB33 AL513043.1-201ENST00000439124 535 ntBASIC2.36□□□□□ -2.03
LINC01560Q8TB33 OR10R1P-201ENST00000441524 1141 ntBASIC2.36□□□□□ -2.03
LINC01560Q8TB33 EXOSC3P1-201ENST00000448649 500 ntBASIC2.36□□□□□ -2.03
LINC01560Q8TB33 AC005297.2-201ENST00000450430 606 ntBASIC2.36□□□□□ -2.03
LINC01560Q8TB33 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC2.36□□□□□ -2.03
LINC01560Q8TB33 snoU109.3-201ENST00000459477 145 ntBASIC2.36□□□□□ -2.03
LINC01560Q8TB33 AC026410.2-201ENST00000460281 156 ntBASIC2.36□□□□□ -2.03
LINC01560Q8TB33 AC092754.2-201ENST00000463506 460 ntBASIC2.36□□□□□ -2.03
LINC01560Q8TB33 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.36□□□□□ -2.03
LINC01560Q8TB33 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.36□□□□□ -2.03
LINC01560Q8TB33 TMEM251P1-201ENST00000503717 318 ntBASIC2.36□□□□□ -2.03
LINC01560Q8TB33 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.36□□□□□ -2.03
LINC01560Q8TB33 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.36□□□□□ -2.03
LINC01560Q8TB33 HMGB1P28-201ENST00000507778 552 ntBASIC2.36□□□□□ -2.03
LINC01560Q8TB33 AC117522.3-201ENST00000507974 584 ntBASIC2.36□□□□□ -2.03
LINC01560Q8TB33 MTCO2P32-201ENST00000514865 403 ntBASIC2.36□□□□□ -2.03
LINC01560Q8TB33 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.36□□□□□ -2.03
LINC01560Q8TB33 RN7SKP43-201ENST00000516173 320 ntBASIC2.36□□□□□ -2.03
LINC01560Q8TB33 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.36□□□□□ -2.03
LINC01560Q8TB33 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
LINC01560Q8TB33 AC018630.1-201ENST00000541376 925 ntBASIC2.36□□□□□ -2.03
LINC01560Q8TB33 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.36□□□□□ -2.03
LINC01560Q8TB33 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.36□□□□□ -2.03
LINC01560Q8TB33 MAGOH2P-202ENST00000584384 429 ntBASIC2.36□□□□□ -2.03
LINC01560Q8TB33 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC2.36□□□□□ -2.03
LINC01560Q8TB33 AC010738.1-201ENST00000604970 987 ntBASIC2.36□□□□□ -2.03
LINC01560Q8TB33 AC069304.2-201ENST00000605154 435 ntBASIC2.36□□□□□ -2.03
LINC01560Q8TB33 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.36□□□□□ -2.03
LINC01560Q8TB33 AL355493.4-201ENST00000618530 292 ntBASIC2.36□□□□□ -2.03
LINC01560Q8TB33 AL360181.4-201ENST00000621752 134 ntBASIC2.36□□□□□ -2.03
LINC01560Q8TB33 AC103798.2-201ENST00000624292 632 ntBASIC2.36□□□□□ -2.03
LINC01560Q8TB33 AC010608.3-201ENST00000625048 527 ntBASIC2.36□□□□□ -2.03
LINC01560Q8TB33 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC2.36□□□□□ -2.03
LINC01560Q8TB33 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
LINC01560Q8TB33 CDR1-202ENST00000625883 1485 ntBASIC2.36□□□□□ -2.03
LINC01560Q8TB33 AC116096.1-201ENST00000566804 2314 ntBASIC2.36□□□□□ -2.03
LINC01560Q8TB33 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.36□□□□□ -2.03
LINC01560Q8TB33 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
LINC01560Q8TB33 AP003122.5-201ENST00000527668 3766 ntBASIC2.35□□□□□ -2.03
LINC01560Q8TB33 AC021755.1-201ENST00000559747 1447 ntBASIC2.35□□□□□ -2.03
LINC01560Q8TB33 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
LINC01560Q8TB33 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.35□□□□□ -2.03
LINC01560Q8TB33 MTND5P27-201ENST00000428871 1720 ntBASIC2.35□□□□□ -2.03
LINC01560Q8TB33 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
LINC01560Q8TB33 RSL24D1P4-201ENST00000400938 484 ntBASIC2.35□□□□□ -2.03
LINC01560Q8TB33 DHFRP6-201ENST00000401776 268 ntBASIC2.35□□□□□ -2.03
LINC01560Q8TB33 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.35□□□□□ -2.03
LINC01560Q8TB33 YPEL5P1-201ENST00000419731 367 ntBASIC2.35□□□□□ -2.03
LINC01560Q8TB33 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.35□□□□□ -2.03
LINC01560Q8TB33 HSFY7P-201ENST00000432672 318 ntBASIC2.35□□□□□ -2.03
LINC01560Q8TB33 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.35□□□□□ -2.03
LINC01560Q8TB33 HSFY8P-201ENST00000437934 318 ntBASIC2.35□□□□□ -2.03
LINC01560Q8TB33 HSFY5P-201ENST00000453726 309 ntBASIC2.35□□□□□ -2.03
LINC01560Q8TB33 AC011979.1-201ENST00000472300 483 ntBASIC2.35□□□□□ -2.03
LINC01560Q8TB33 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.35□□□□□ -2.03
LINC01560Q8TB33 RPL21P131-201ENST00000497298 483 ntBASIC2.35□□□□□ -2.03
LINC01560Q8TB33 MTCYBP17-201ENST00000503579 789 ntBASIC2.35□□□□□ -2.03
LINC01560Q8TB33 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.35□□□□□ -2.03
LINC01560Q8TB33 RNU6-1095P-201ENST00000516148 108 ntBASIC2.35□□□□□ -2.03
LINC01560Q8TB33 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
LINC01560Q8TB33 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.35□□□□□ -2.03
LINC01560Q8TB33 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.35□□□□□ -2.03
LINC01560Q8TB33 SLC2A13P1-201ENST00000531560 322 ntBASIC2.35□□□□□ -2.03
LINC01560Q8TB33 AC005832.3-201ENST00000537929 631 ntBASIC2.35□□□□□ -2.03
LINC01560Q8TB33 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.35□□□□□ -2.03
LINC01560Q8TB33 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.35□□□□□ -2.03
LINC01560Q8TB33 AL132657.2-201ENST00000564417 358 ntBASIC2.35□□□□□ -2.03
LINC01560Q8TB33 MIR4637-201ENST00000582405 84 ntBASIC2.35□□□□□ -2.03
LINC01560Q8TB33 AC104984.5-201ENST00000586878 94 ntBASIC2.35□□□□□ -2.03
LINC01560Q8TB33 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.35□□□□□ -2.03
LINC01560Q8TB33 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
LINC01560Q8TB33 MTND3P19-201ENST00000603825 345 ntBASIC2.35□□□□□ -2.03
LINC01560Q8TB33 AL160237.3-201ENST00000604114 1013 ntBASIC2.35□□□□□ -2.03
LINC01560Q8TB33 AP001330.4-201ENST00000604350 154 ntBASIC2.35□□□□□ -2.03
LINC01560Q8TB33 AL139022.2-201ENST00000606934 443 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms