Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NKX2-3Q8TAU0 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
NKX2-3Q8TAU0 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.39□□□□□ -1.39
NKX2-3Q8TAU0 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NKX2-3Q8TAU0 AC107081.3-201ENST00000612715 2034 ntBASIC6.39□□□□□ -1.39
NKX2-3Q8TAU0 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
NKX2-3Q8TAU0 XIAPP3-201ENST00000312918 795 ntBASIC6.39□□□□□ -1.39
NKX2-3Q8TAU0 Y_RNA.233-201ENST00000364407 101 ntBASIC6.39□□□□□ -1.39
NKX2-3Q8TAU0 RNA5SP205-201ENST00000364653 136 ntBASIC6.39□□□□□ -1.39
NKX2-3Q8TAU0 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC6.39□□□□□ -1.39
NKX2-3Q8TAU0 SNORA67-201ENST00000384423 137 ntBASIC6.39□□□□□ -1.39
NKX2-3Q8TAU0 Y_RNA.541-201ENST00000384640 113 ntBASIC6.39□□□□□ -1.39
NKX2-3Q8TAU0 MIR551A-201ENST00000385042 96 ntBASIC6.39□□□□□ -1.39
NKX2-3Q8TAU0 AC013442.1-201ENST00000397347 228 ntBASIC6.39□□□□□ -1.39
NKX2-3Q8TAU0 Y_RNA.592-201ENST00000410274 109 ntBASIC6.39□□□□□ -1.39
NKX2-3Q8TAU0 RNU6-1135P-201ENST00000411083 103 ntBASIC6.39□□□□□ -1.39
NKX2-3Q8TAU0 GSTM5P1-201ENST00000434751 660 ntBASIC6.39□□□□□ -1.39
NKX2-3Q8TAU0 PRDX3P3-201ENST00000447765 522 ntBASIC6.39□□□□□ -1.39
NKX2-3Q8TAU0 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC6.39□□□□□ -1.39
NKX2-3Q8TAU0 RNU7-138P-201ENST00000459479 64 ntBASIC6.39□□□□□ -1.39
NKX2-3Q8TAU0 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC6.39□□□□□ -1.39
NKX2-3Q8TAU0 RN7SL738P-201ENST00000470264 297 ntBASIC6.39□□□□□ -1.39
NKX2-3Q8TAU0 RN7SL481P-201ENST00000477764 299 ntBASIC6.39□□□□□ -1.39
NKX2-3Q8TAU0 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC6.39□□□□□ -1.39
NKX2-3Q8TAU0 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC6.39□□□□□ -1.39
NKX2-3Q8TAU0 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NKX2-3Q8TAU0 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC6.39□□□□□ -1.39
NKX2-3Q8TAU0 AC136932.1-201ENST00000574771 208 ntBASIC6.39□□□□□ -1.39
NKX2-3Q8TAU0 MIR4293-201ENST00000584305 78 ntBASIC6.39□□□□□ -1.39
NKX2-3Q8TAU0 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC6.39□□□□□ -1.39
NKX2-3Q8TAU0 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.39□□□□□ -1.39
NKX2-3Q8TAU0 ELOCP5-201ENST00000604924 333 ntBASIC6.39□□□□□ -1.39
NKX2-3Q8TAU0 AC007619.2-201ENST00000605743 379 ntBASIC6.39□□□□□ -1.39
NKX2-3Q8TAU0 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC6.39□□□□□ -1.39
NKX2-3Q8TAU0 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC6.39□□□□□ -1.39
NKX2-3Q8TAU0 AC243654.2-201ENST00000612843 443 ntBASIC6.39□□□□□ -1.39
NKX2-3Q8TAU0 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC6.39□□□□□ -1.39
NKX2-3Q8TAU0 AP000346.3-201ENST00000622821 210 ntBASIC6.39□□□□□ -1.39
NKX2-3Q8TAU0 IRF5P1-201ENST00000504852 2164 ntBASIC6.39□□□□□ -1.39
NKX2-3Q8TAU0 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NKX2-3Q8TAU0 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.39□□□□□ -1.39
NKX2-3Q8TAU0 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
NKX2-3Q8TAU0 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
NKX2-3Q8TAU0 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.39□□□□□ -1.39
NKX2-3Q8TAU0 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NKX2-3Q8TAU0 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NKX2-3Q8TAU0 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.39□□□□□ -1.39
NKX2-3Q8TAU0 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
NKX2-3Q8TAU0 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NKX2-3Q8TAU0 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
NKX2-3Q8TAU0 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NKX2-3Q8TAU0 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
NKX2-3Q8TAU0 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC6.38□□□□□ -1.39
NKX2-3Q8TAU0 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NKX2-3Q8TAU0 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NKX2-3Q8TAU0 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NKX2-3Q8TAU0 RPL23AP36-201ENST00000413895 458 ntBASIC6.38□□□□□ -1.39
NKX2-3Q8TAU0 AC017079.2-201ENST00000416102 485 ntBASIC6.38□□□□□ -1.39
NKX2-3Q8TAU0 BX842559.1-201ENST00000419615 532 ntBASIC6.38□□□□□ -1.39
NKX2-3Q8TAU0 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC6.38□□□□□ -1.39
NKX2-3Q8TAU0 AC093414.1-201ENST00000434712 514 ntBASIC6.38□□□□□ -1.39
NKX2-3Q8TAU0 AC008267.6-201ENST00000441664 139 ntBASIC6.38□□□□□ -1.39
NKX2-3Q8TAU0 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC6.38□□□□□ -1.39
NKX2-3Q8TAU0 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC6.38□□□□□ -1.39
NKX2-3Q8TAU0 AP000926.1-201ENST00000479573 241 ntBASIC6.38□□□□□ -1.39
NKX2-3Q8TAU0 AC018552.1-201ENST00000562099 811 ntBASIC6.38□□□□□ -1.39
NKX2-3Q8TAU0 AC115085.1-201ENST00000588924 229 ntBASIC6.38□□□□□ -1.39
NKX2-3Q8TAU0 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC6.38□□□□□ -1.39
NKX2-3Q8TAU0 AC091895.1-201ENST00000624494 256 ntBASIC6.38□□□□□ -1.39
NKX2-3Q8TAU0 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
NKX2-3Q8TAU0 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.38□□□□□ -1.39
NKX2-3Q8TAU0 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
NKX2-3Q8TAU0 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
NKX2-3Q8TAU0 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
NKX2-3Q8TAU0 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NKX2-3Q8TAU0 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
NKX2-3Q8TAU0 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NKX2-3Q8TAU0 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
NKX2-3Q8TAU0 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.37□□□□□ -1.39
NKX2-3Q8TAU0 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.37□□□□□ -1.39
NKX2-3Q8TAU0 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
NKX2-3Q8TAU0 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
NKX2-3Q8TAU0 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
NKX2-3Q8TAU0 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.37□□□□□ -1.39
NKX2-3Q8TAU0 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.37□□□□□ -1.39
NKX2-3Q8TAU0 AC006484.1-201ENST00000435086 1884 ntBASIC6.37□□□□□ -1.39
NKX2-3Q8TAU0 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
NKX2-3Q8TAU0 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
NKX2-3Q8TAU0 Y_RNA.439-201ENST00000384119 94 ntBASIC6.37□□□□□ -1.39
NKX2-3Q8TAU0 RNU6-1035P-201ENST00000384477 107 ntBASIC6.37□□□□□ -1.39
NKX2-3Q8TAU0 CYB5AP4-201ENST00000396692 399 ntBASIC6.37□□□□□ -1.39
NKX2-3Q8TAU0 U3.36-201ENST00000408418 213 ntBASIC6.37□□□□□ -1.39
NKX2-3Q8TAU0 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC6.37□□□□□ -1.39
NKX2-3Q8TAU0 RNA5SP107-201ENST00000411358 122 ntBASIC6.37□□□□□ -1.39
NKX2-3Q8TAU0 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC6.37□□□□□ -1.39
NKX2-3Q8TAU0 AC007098.1-201ENST00000420122 367 ntBASIC6.37□□□□□ -1.39
NKX2-3Q8TAU0 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC6.37□□□□□ -1.39
NKX2-3Q8TAU0 AL591704.1-201ENST00000432574 275 ntBASIC6.37□□□□□ -1.39
NKX2-3Q8TAU0 ELOCP18-201ENST00000434209 337 ntBASIC6.37□□□□□ -1.39
NKX2-3Q8TAU0 AC005094.1-201ENST00000440420 368 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms