Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 snoZ278.1-201ENST00000517059 112 ntBASIC0.64□□□□□ -2.31
SYNE1Q8NF91 AC087241.2-201ENST00000535801 324 ntBASIC0.64□□□□□ -2.31
SYNE1Q8NF91 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC0.64□□□□□ -2.31
SYNE1Q8NF91 AC019131.2-201ENST00000609071 870 ntBASIC0.64□□□□□ -2.31
SYNE1Q8NF91 MIR6734-201ENST00000621166 68 ntBASIC0.64□□□□□ -2.31
SYNE1Q8NF91 OR1S1-201ENST00000624470 978 ntBASIC0.64□□□□□ -2.31
SYNE1Q8NF91 AL157700.1-201ENST00000561973 1432 ntBASIC0.64□□□□□ -2.31
SYNE1Q8NF91 Y_RNA.191-201ENST00000363972 113 ntBASIC0.64□□□□□ -2.31
SYNE1Q8NF91 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC0.64□□□□□ -2.31
SYNE1Q8NF91 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC0.64□□□□□ -2.31
SYNE1Q8NF91 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC0.64□□□□□ -2.31
SYNE1Q8NF91 SNORD116-30-201ENST00000516468 85 ntBASIC0.64□□□□□ -2.31
SYNE1Q8NF91 ZDHHC20P3-201ENST00000531576 336 ntBASIC0.64□□□□□ -2.31
SYNE1Q8NF91 AL049779.4-201ENST00000604500 156 ntBASIC0.64□□□□□ -2.31
SYNE1Q8NF91 AP001521.1-201ENST00000609150 300 ntBASIC0.64□□□□□ -2.31
SYNE1Q8NF91 AC022709.1-201ENST00000615967 87 ntBASIC0.64□□□□□ -2.31
SYNE1Q8NF91 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC0.64□□□□□ -2.31
SYNE1Q8NF91 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC0.64□□□□□ -2.31
SYNE1Q8NF91 ZNF720P1-201ENST00000562403 1939 ntBASIC0.64□□□□□ -2.31
SYNE1Q8NF91 CUBN-201ENST00000377823 705 ntTSL 3 BASIC0.64□□□□□ -2.31
SYNE1Q8NF91 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
SYNE1Q8NF91 SNORA51.11-201ENST00000384442 131 ntBASIC0.64□□□□□ -2.31
SYNE1Q8NF91 CR769767.1-201ENST00000436337 346 ntBASIC0.64□□□□□ -2.31
SYNE1Q8NF91 AC011611.5-201ENST00000552477 578 ntBASIC0.64□□□□□ -2.31
SYNE1Q8NF91 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC0.64□□□□□ -2.31
SYNE1Q8NF91 MIR5002-201ENST00000584713 97 ntBASIC0.64□□□□□ -2.31
SYNE1Q8NF91 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC0.64□□□□□ -2.31
SYNE1Q8NF91 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC0.64□□□□□ -2.31
SYNE1Q8NF91 AL035425.3-201ENST00000564206 4996 ntBASIC0.64□□□□□ -2.31
SYNE1Q8NF91 AP001350.1-201ENST00000601906 1524 ntBASIC0.64□□□□□ -2.31
SYNE1Q8NF91 DEFA7P-201ENST00000382676 285 ntBASIC0.64□□□□□ -2.31
SYNE1Q8NF91 RNU6-837P-201ENST00000391056 108 ntBASIC0.64□□□□□ -2.31
SYNE1Q8NF91 RPS26P56-201ENST00000444468 240 ntBASIC0.64□□□□□ -2.31
SYNE1Q8NF91 AC007395.1-201ENST00000451333 677 ntBASIC0.64□□□□□ -2.31
SYNE1Q8NF91 HESX1-202ENST00000473921 757 ntTSL 5 BASIC0.64□□□□□ -2.31
SYNE1Q8NF91 RNA5SP220-201ENST00000516298 104 ntBASIC0.64□□□□□ -2.31
SYNE1Q8NF91 RN7SKP40-201ENST00000517211 242 ntBASIC0.64□□□□□ -2.31
SYNE1Q8NF91 AP003467.2-201ENST00000520175 319 ntBASIC0.64□□□□□ -2.31
SYNE1Q8NF91 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC0.64□□□□□ -2.31
SYNE1Q8NF91 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC0.64□□□□□ -2.31
SYNE1Q8NF91 AC012360.2-201ENST00000609349 391 ntBASIC0.64□□□□□ -2.31
SYNE1Q8NF91 AC011890.2-201ENST00000613393 294 ntBASIC0.64□□□□□ -2.31
SYNE1Q8NF91 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
SYNE1Q8NF91 ATP5F1P1-201ENST00000433775 569 ntBASIC0.64□□□□□ -2.31
SYNE1Q8NF91 USP9YP8-201ENST00000441913 500 ntBASIC0.64□□□□□ -2.31
SYNE1Q8NF91 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC0.64□□□□□ -2.31
SYNE1Q8NF91 GSTA11P-201ENST00000452866 669 ntBASIC0.64□□□□□ -2.31
SYNE1Q8NF91 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
SYNE1Q8NF91 CDC42P4-201ENST00000510507 563 ntBASIC0.64□□□□□ -2.31
SYNE1Q8NF91 RPPH1-2P-201ENST00000516688 293 ntBASIC0.64□□□□□ -2.31
SYNE1Q8NF91 AC234775.3-201ENST00000564612 656 ntBASIC0.64□□□□□ -2.31
SYNE1Q8NF91 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC0.64□□□□□ -2.31
SYNE1Q8NF91 AP000676.4-201ENST00000624659 623 ntBASIC0.64□□□□□ -2.31
SYNE1Q8NF91 AL121594.5-201ENST00000631724 573 ntBASIC0.64□□□□□ -2.31
SYNE1Q8NF91 FO624990.1-201ENST00000636373 85 ntBASIC0.64□□□□□ -2.31
SYNE1Q8NF91 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
SYNE1Q8NF91 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
SYNE1Q8NF91 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC0.64□□□□□ -2.31
SYNE1Q8NF91 SNORA41-201ENST00000384675 132 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 GSTA12P-201ENST00000402398 508 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 RNU4-62P-201ENST00000410125 130 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 XKRYP4-201ENST00000414395 483 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 XKRYP5-201ENST00000449659 483 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC0.63□□□□□ -2.31
SYNE1Q8NF91 AC025857.1-201ENST00000525252 377 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 MIR3683-201ENST00000580847 82 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 AL590282.1-201ENST00000610379 1136 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
SYNE1Q8NF91 Z99496.1-201ENST00000469424 1477 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
SYNE1Q8NF91 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
SYNE1Q8NF91 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC0.63□□□□□ -2.31
SYNE1Q8NF91 RNA5SP492-201ENST00000411330 114 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 BX682237.1-201ENST00000415016 335 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 AC022022.1-201ENST00000430304 178 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 AL590664.1-201ENST00000448065 339 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 AL513343.1-201ENST00000451818 792 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.63□□□□□ -2.31
SYNE1Q8NF91 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC0.63□□□□□ -2.31
SYNE1Q8NF91 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC0.63□□□□□ -2.31
SYNE1Q8NF91 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC0.63□□□□□ -2.31
SYNE1Q8NF91 AL160394.1-201ENST00000624765 724 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 GMFB-210ENST00000628554 639 ntTSL 4 BASIC0.63□□□□□ -2.31
SYNE1Q8NF91 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
SYNE1Q8NF91 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC0.63□□□□□ -2.31
SYNE1Q8NF91 Y_RNA.458-201ENST00000384240 102 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 RPL19P1-201ENST00000411635 428 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC0.63□□□□□ -2.31
SYNE1Q8NF91 AL591719.1-201ENST00000444669 744 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC0.63□□□□□ -2.31
SYNE1Q8NF91 COX6CP5-201ENST00000527162 228 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC0.63□□□□□ -2.31
SYNE1Q8NF91 AC110588.1-201ENST00000559699 137 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 SUB1P3-201ENST00000564581 315 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 AL589994.2-201ENST00000621124 579 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC0.63□□□□□ -2.31
SYNE1Q8NF91 RNU6-335P-201ENST00000364563 113 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC0.63□□□□□ -2.31
SYNE1Q8NF91 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
SYNE1Q8NF91 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms