Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.47□□□□□ -1.69
RNF169Q8NCN4 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RNF169Q8NCN4 RNU1-108P-201ENST00000362556 161 ntBASIC4.47□□□□□ -1.69
RNF169Q8NCN4 RNA5SP502-201ENST00000362694 119 ntBASIC4.47□□□□□ -1.69
RNF169Q8NCN4 RNU6-451P-201ENST00000362921 107 ntBASIC4.47□□□□□ -1.69
RNF169Q8NCN4 Y_RNA.234-201ENST00000364409 97 ntBASIC4.47□□□□□ -1.69
RNF169Q8NCN4 MT-TD-201ENST00000387419 68 ntBASIC4.47□□□□□ -1.69
RNF169Q8NCN4 RN7SKP159-201ENST00000410657 292 ntBASIC4.47□□□□□ -1.69
RNF169Q8NCN4 NUP35P2-201ENST00000416748 943 ntBASIC4.47□□□□□ -1.69
RNF169Q8NCN4 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.47□□□□□ -1.69
RNF169Q8NCN4 AC019097.1-201ENST00000424783 735 ntBASIC4.47□□□□□ -1.69
RNF169Q8NCN4 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.47□□□□□ -1.69
RNF169Q8NCN4 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.47□□□□□ -1.69
RNF169Q8NCN4 AC108734.1-201ENST00000439549 399 ntBASIC4.47□□□□□ -1.69
RNF169Q8NCN4 ABCF2P2-201ENST00000450549 296 ntBASIC4.47□□□□□ -1.69
RNF169Q8NCN4 HMGB1P15-201ENST00000453854 435 ntBASIC4.47□□□□□ -1.69
RNF169Q8NCN4 OR5H5P-201ENST00000503164 928 ntBASIC4.47□□□□□ -1.69
RNF169Q8NCN4 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.47□□□□□ -1.69
RNF169Q8NCN4 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC4.47□□□□□ -1.69
RNF169Q8NCN4 SNORA67.7-201ENST00000516664 135 ntBASIC4.47□□□□□ -1.69
RNF169Q8NCN4 CENPUP1-201ENST00000526649 1202 ntBASIC4.47□□□□□ -1.69
RNF169Q8NCN4 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.47□□□□□ -1.69
RNF169Q8NCN4 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.47□□□□□ -1.69
RNF169Q8NCN4 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.47□□□□□ -1.69
RNF169Q8NCN4 GLYCAM1-201ENST00000546596 285 ntBASIC4.47□□□□□ -1.69
RNF169Q8NCN4 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.47□□□□□ -1.69
RNF169Q8NCN4 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.47□□□□□ -1.69
RNF169Q8NCN4 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.47□□□□□ -1.69
RNF169Q8NCN4 MIR4716-201ENST00000579628 84 ntBASIC4.47□□□□□ -1.69
RNF169Q8NCN4 MIR4512-201ENST00000583257 77 ntBASIC4.47□□□□□ -1.69
RNF169Q8NCN4 MIR3158-1-201ENST00000583596 81 ntBASIC4.47□□□□□ -1.69
RNF169Q8NCN4 UBE2L4-201ENST00000587688 464 ntBASIC4.47□□□□□ -1.69
RNF169Q8NCN4 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.47□□□□□ -1.69
RNF169Q8NCN4 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.47□□□□□ -1.69
RNF169Q8NCN4 AL391813.2-201ENST00000609113 322 ntBASIC4.47□□□□□ -1.69
RNF169Q8NCN4 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.47□□□□□ -1.69
RNF169Q8NCN4 AC006504.8-201ENST00000621046 635 ntBASIC4.47□□□□□ -1.69
RNF169Q8NCN4 AL158801.5-201ENST00000623123 465 ntBASIC4.47□□□□□ -1.69
RNF169Q8NCN4 AC009161.2-201ENST00000624626 138 ntBASIC4.47□□□□□ -1.69
RNF169Q8NCN4 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
RNF169Q8NCN4 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
RNF169Q8NCN4 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RNF169Q8NCN4 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
RNF169Q8NCN4 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
RNF169Q8NCN4 ASNSP1-201ENST00000518311 1939 ntBASIC4.46□□□□□ -1.69
RNF169Q8NCN4 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
RNF169Q8NCN4 MTND4P23-201ENST00000447723 1363 ntBASIC4.46□□□□□ -1.7
RNF169Q8NCN4 RNA5SP258-201ENST00000362750 119 ntBASIC4.46□□□□□ -1.7
RNF169Q8NCN4 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.46□□□□□ -1.7
RNF169Q8NCN4 SNORD56.2-201ENST00000363242 71 ntBASIC4.46□□□□□ -1.7
RNF169Q8NCN4 RNU6-359P-201ENST00000365466 108 ntBASIC4.46□□□□□ -1.7
RNF169Q8NCN4 RNU6-108P-201ENST00000365558 107 ntBASIC4.46□□□□□ -1.7
RNF169Q8NCN4 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
RNF169Q8NCN4 RPL31P2-201ENST00000413849 377 ntBASIC4.46□□□□□ -1.7
RNF169Q8NCN4 RBMY1KP-201ENST00000423480 476 ntBASIC4.46□□□□□ -1.7
RNF169Q8NCN4 RWDD4P2-201ENST00000426392 563 ntBASIC4.46□□□□□ -1.7
RNF169Q8NCN4 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.46□□□□□ -1.7
RNF169Q8NCN4 AL035410.1-201ENST00000427409 427 ntBASIC4.46□□□□□ -1.7
RNF169Q8NCN4 EZH2P1-201ENST00000431167 291 ntBASIC4.46□□□□□ -1.7
RNF169Q8NCN4 RPL7P54-201ENST00000438336 674 ntBASIC4.46□□□□□ -1.7
RNF169Q8NCN4 SEPT14P3-201ENST00000439401 183 ntBASIC4.46□□□□□ -1.7
RNF169Q8NCN4 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.46□□□□□ -1.7
RNF169Q8NCN4 USP9YP15-201ENST00000442391 422 ntBASIC4.46□□□□□ -1.7
RNF169Q8NCN4 AL732372.2-207ENST00000445840 183 ntBASIC4.46□□□□□ -1.7
RNF169Q8NCN4 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.46□□□□□ -1.7
RNF169Q8NCN4 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.46□□□□□ -1.7
RNF169Q8NCN4 SNRPGP6-201ENST00000451124 220 ntBASIC4.46□□□□□ -1.7
RNF169Q8NCN4 SEPT14P2-201ENST00000453405 183 ntBASIC4.46□□□□□ -1.7
RNF169Q8NCN4 PMCHL2-203ENST00000457791 237 ntBASIC4.46□□□□□ -1.7
RNF169Q8NCN4 AC022364.2-201ENST00000457963 554 ntBASIC4.46□□□□□ -1.7
RNF169Q8NCN4 PLGLA-201ENST00000465668 449 ntBASIC4.46□□□□□ -1.7
RNF169Q8NCN4 RPL39P36-201ENST00000490784 156 ntBASIC4.46□□□□□ -1.7
RNF169Q8NCN4 AC108145.1-201ENST00000503770 153 ntBASIC4.46□□□□□ -1.7
RNF169Q8NCN4 AC114786.4-201ENST00000508771 728 ntBASIC4.46□□□□□ -1.7
RNF169Q8NCN4 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
RNF169Q8NCN4 SEPT14P4-201ENST00000513445 186 ntBASIC4.46□□□□□ -1.7
RNF169Q8NCN4 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.46□□□□□ -1.7
RNF169Q8NCN4 RNU6-835P-201ENST00000516974 104 ntBASIC4.46□□□□□ -1.7
RNF169Q8NCN4 IFITM8P-201ENST00000522529 394 ntBASIC4.46□□□□□ -1.7
RNF169Q8NCN4 FO082796.1-201ENST00000523795 183 ntBASIC4.46□□□□□ -1.7
RNF169Q8NCN4 PHBP17-201ENST00000528576 541 ntBASIC4.46□□□□□ -1.7
RNF169Q8NCN4 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RNF169Q8NCN4 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.46□□□□□ -1.7
RNF169Q8NCN4 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.46□□□□□ -1.7
RNF169Q8NCN4 HMGB3P26-201ENST00000560051 582 ntBASIC4.46□□□□□ -1.7
RNF169Q8NCN4 HSPE1P5-201ENST00000561489 272 ntBASIC4.46□□□□□ -1.7
RNF169Q8NCN4 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.46□□□□□ -1.7
RNF169Q8NCN4 AC124068.1-201ENST00000563131 678 ntBASIC4.46□□□□□ -1.7
RNF169Q8NCN4 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.46□□□□□ -1.7
RNF169Q8NCN4 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.46□□□□□ -1.7
RNF169Q8NCN4 AL451044.1-201ENST00000604867 238 ntBASIC4.46□□□□□ -1.7
RNF169Q8NCN4 AL356585.4-201ENST00000623078 1229 ntBASIC4.46□□□□□ -1.7
RNF169Q8NCN4 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RNF169Q8NCN4 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
RNF169Q8NCN4 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RNF169Q8NCN4 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
RNF169Q8NCN4 AC105074.1-201ENST00000623380 3095 ntBASIC4.46□□□□□ -1.7
RNF169Q8NCN4 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.46□□□□□ -1.7
RNF169Q8NCN4 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.45□□□□□ -1.7
RNF169Q8NCN4 AC011266.1-201ENST00000624119 3569 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms