Protein–RNA interactions for Protein: Q8NA47

CCDC63, Coiled-coil domain-containing protein 63, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63Q8NA47 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC63Q8NA47 AC092447.10-201ENST00000620607 1652 ntBASIC3.3□□□□□ -1.88
CCDC63Q8NA47 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC63Q8NA47 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.3□□□□□ -1.88
CCDC63Q8NA47 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CCDC63Q8NA47 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC63Q8NA47 RNU6-660P-201ENST00000364566 109 ntBASIC3.3□□□□□ -1.88
CCDC63Q8NA47 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CCDC63Q8NA47 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC63Q8NA47 RNU6-253P-201ENST00000384730 105 ntBASIC3.3□□□□□ -1.88
CCDC63Q8NA47 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC63Q8NA47 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC63Q8NA47 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC63Q8NA47 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC63Q8NA47 RPL21P32-201ENST00000419877 477 ntBASIC3.3□□□□□ -1.88
CCDC63Q8NA47 BEND7P1-201ENST00000422058 457 ntBASIC3.3□□□□□ -1.88
CCDC63Q8NA47 MTND5P25-201ENST00000430499 799 ntBASIC3.3□□□□□ -1.88
CCDC63Q8NA47 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC63Q8NA47 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC63Q8NA47 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC63Q8NA47 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC63Q8NA47 AC093392.2-201ENST00000450682 337 ntBASIC3.3□□□□□ -1.88
CCDC63Q8NA47 AC098826.2-201ENST00000452011 651 ntBASIC3.3□□□□□ -1.88
CCDC63Q8NA47 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.3□□□□□ -1.88
CCDC63Q8NA47 KLHL2P1-201ENST00000508691 521 ntBASIC3.3□□□□□ -1.88
CCDC63Q8NA47 RNU6-528P-201ENST00000516926 100 ntBASIC3.3□□□□□ -1.88
CCDC63Q8NA47 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC63Q8NA47 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.3□□□□□ -1.88
CCDC63Q8NA47 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC63Q8NA47 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.3□□□□□ -1.88
CCDC63Q8NA47 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC63Q8NA47 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.3□□□□□ -1.88
CCDC63Q8NA47 PARP1P2-201ENST00000556806 195 ntBASIC3.3□□□□□ -1.88
CCDC63Q8NA47 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC63Q8NA47 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC63Q8NA47 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.3□□□□□ -1.88
CCDC63Q8NA47 NIFKP6-201ENST00000598115 845 ntBASIC3.3□□□□□ -1.88
CCDC63Q8NA47 BCRP9-201ENST00000605312 388 ntBASIC3.3□□□□□ -1.88
CCDC63Q8NA47 AC072039.2-201ENST00000608883 439 ntBASIC3.3□□□□□ -1.88
CCDC63Q8NA47 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.3□□□□□ -1.88
CCDC63Q8NA47 AC091903.1-201ENST00000624322 454 ntBASIC3.3□□□□□ -1.88
CCDC63Q8NA47 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC63Q8NA47 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC63Q8NA47 MTND4P16-201ENST00000466108 1367 ntBASIC3.29□□□□□ -1.88
CCDC63Q8NA47 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
CCDC63Q8NA47 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC63Q8NA47 Y_RNA.18-201ENST00000362461 102 ntBASIC3.29□□□□□ -1.88
CCDC63Q8NA47 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CCDC63Q8NA47 RNU6-882P-201ENST00000391025 103 ntBASIC3.29□□□□□ -1.88
CCDC63Q8NA47 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.29□□□□□ -1.88
CCDC63Q8NA47 MIR320C1-201ENST00000408566 88 ntBASIC3.29□□□□□ -1.88
CCDC63Q8NA47 RNA5SP344-201ENST00000411081 104 ntBASIC3.29□□□□□ -1.88
CCDC63Q8NA47 MRPL50P2-201ENST00000416821 482 ntBASIC3.29□□□□□ -1.88
CCDC63Q8NA47 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC63Q8NA47 HSPE1P1-201ENST00000421494 318 ntBASIC3.29□□□□□ -1.88
CCDC63Q8NA47 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC63Q8NA47 RSL24D1P6-201ENST00000426934 401 ntBASIC3.29□□□□□ -1.88
CCDC63Q8NA47 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC63Q8NA47 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC63Q8NA47 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC63Q8NA47 PAXBP1P1-201ENST00000449315 447 ntBASIC3.29□□□□□ -1.88
CCDC63Q8NA47 AL133217.1-201ENST00000450980 425 ntBASIC3.29□□□□□ -1.88
CCDC63Q8NA47 AC009220.1-201ENST00000451614 275 ntBASIC3.29□□□□□ -1.88
CCDC63Q8NA47 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC63Q8NA47 HMGN2P13-201ENST00000476476 274 ntBASIC3.29□□□□□ -1.88
CCDC63Q8NA47 AC017015.1-201ENST00000477387 286 ntBASIC3.29□□□□□ -1.88
CCDC63Q8NA47 AC025518.1-201ENST00000479856 347 ntBASIC3.29□□□□□ -1.88
CCDC63Q8NA47 OR2A20P-203ENST00000498397 1268 ntBASIC3.29□□□□□ -1.88
CCDC63Q8NA47 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC63Q8NA47 FCF1P8-201ENST00000510322 597 ntBASIC3.29□□□□□ -1.88
CCDC63Q8NA47 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC63Q8NA47 SNRPGP16-201ENST00000533275 226 ntBASIC3.29□□□□□ -1.88
CCDC63Q8NA47 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC63Q8NA47 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC63Q8NA47 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.29□□□□□ -1.88
CCDC63Q8NA47 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC3.29□□□□□ -1.88
CCDC63Q8NA47 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC63Q8NA47 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC63Q8NA47 FAM60BP-201ENST00000578364 658 ntBASIC3.29□□□□□ -1.88
CCDC63Q8NA47 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC63Q8NA47 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC63Q8NA47 AC068313.1-201ENST00000604028 1008 ntBASIC3.29□□□□□ -1.88
CCDC63Q8NA47 AL022099.1-201ENST00000604551 712 ntBASIC3.29□□□□□ -1.88
CCDC63Q8NA47 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC63Q8NA47 AL591516.1-201ENST00000611326 274 ntBASIC3.29□□□□□ -1.88
CCDC63Q8NA47 AC004223.4-201ENST00000612426 332 ntBASIC3.29□□□□□ -1.88
CCDC63Q8NA47 AC083809.1-201ENST00000615051 472 ntBASIC3.29□□□□□ -1.88
CCDC63Q8NA47 AL356321.1-201ENST00000621360 228 ntBASIC3.29□□□□□ -1.88
CCDC63Q8NA47 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC63Q8NA47 PCMTD1P7-201ENST00000634506 357 ntBASIC3.29□□□□□ -1.88
CCDC63Q8NA47 AC099063.3-201ENST00000642066 185 ntBASIC3.29□□□□□ -1.88
CCDC63Q8NA47 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.29□□□□□ -1.88
CCDC63Q8NA47 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC63Q8NA47 CR383658.2-201ENST00000547576 1525 ntBASIC3.29□□□□□ -1.88
CCDC63Q8NA47 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC63Q8NA47 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
CCDC63Q8NA47 RNU6-500P-201ENST00000362349 107 ntBASIC3.28□□□□□ -1.88
CCDC63Q8NA47 AC068538.1-201ENST00000376856 336 ntBASIC3.28□□□□□ -1.88
CCDC63Q8NA47 MIR141-201ENST00000384975 95 ntBASIC3.28□□□□□ -1.88
CCDC63Q8NA47 RNU1-101P-201ENST00000391171 127 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms