Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 Y_RNA.157-201ENST00000363638 102 ntBASIC4.26□□□□□ -1.73
SLC44A3Q8N4M1 Y_RNA.460-201ENST00000384255 102 ntBASIC4.26□□□□□ -1.73
SLC44A3Q8N4M1 Y_RNA.548-201ENST00000384656 105 ntBASIC4.26□□□□□ -1.73
SLC44A3Q8N4M1 RNU6-1158P-201ENST00000391167 107 ntBASIC4.26□□□□□ -1.73
SLC44A3Q8N4M1 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
SLC44A3Q8N4M1 HDGFP1-201ENST00000405943 252 ntBASIC4.26□□□□□ -1.73
SLC44A3Q8N4M1 RPL36AP53-201ENST00000432891 316 ntBASIC4.26□□□□□ -1.73
SLC44A3Q8N4M1 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.26□□□□□ -1.73
SLC44A3Q8N4M1 RPL23AP74-201ENST00000437246 471 ntBASIC4.26□□□□□ -1.73
SLC44A3Q8N4M1 AC016691.1-201ENST00000441321 413 ntBASIC4.26□□□□□ -1.73
SLC44A3Q8N4M1 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC4.26□□□□□ -1.73
SLC44A3Q8N4M1 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.26□□□□□ -1.73
SLC44A3Q8N4M1 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.26□□□□□ -1.73
SLC44A3Q8N4M1 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.26□□□□□ -1.73
SLC44A3Q8N4M1 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.26□□□□□ -1.73
SLC44A3Q8N4M1 AC093278.1-201ENST00000494700 600 ntBASIC4.26□□□□□ -1.73
SLC44A3Q8N4M1 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SLC44A3Q8N4M1 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.26□□□□□ -1.73
SLC44A3Q8N4M1 RNU6-1220P-201ENST00000517126 108 ntBASIC4.26□□□□□ -1.73
SLC44A3Q8N4M1 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.26□□□□□ -1.73
SLC44A3Q8N4M1 AC107934.1-201ENST00000522215 217 ntBASIC4.26□□□□□ -1.73
SLC44A3Q8N4M1 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.26□□□□□ -1.73
SLC44A3Q8N4M1 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.26□□□□□ -1.73
SLC44A3Q8N4M1 PHBP17-201ENST00000528576 541 ntBASIC4.26□□□□□ -1.73
SLC44A3Q8N4M1 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SLC44A3Q8N4M1 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.26□□□□□ -1.73
SLC44A3Q8N4M1 AC099489.2-201ENST00000574976 260 ntBASIC4.26□□□□□ -1.73
SLC44A3Q8N4M1 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SLC44A3Q8N4M1 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.26□□□□□ -1.73
SLC44A3Q8N4M1 AL592436.1-201ENST00000605135 558 ntBASIC4.26□□□□□ -1.73
SLC44A3Q8N4M1 AC019176.2-201ENST00000611579 315 ntBASIC4.26□□□□□ -1.73
SLC44A3Q8N4M1 AL158196.1-201ENST00000616786 434 ntBASIC4.26□□□□□ -1.73
SLC44A3Q8N4M1 LINC00901.1-201ENST00000617252 152 ntBASIC4.26□□□□□ -1.73
SLC44A3Q8N4M1 AC091953.5-201ENST00000622919 233 ntBASIC4.26□□□□□ -1.73
SLC44A3Q8N4M1 BMS1P21-201ENST00000634565 365 ntBASIC4.26□□□□□ -1.73
SLC44A3Q8N4M1 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SLC44A3Q8N4M1 ASNSP1-201ENST00000518311 1939 ntBASIC4.26□□□□□ -1.73
SLC44A3Q8N4M1 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SLC44A3Q8N4M1 AC116667.1-201ENST00000604855 2072 ntBASIC4.26□□□□□ -1.73
SLC44A3Q8N4M1 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SLC44A3Q8N4M1 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SLC44A3Q8N4M1 XPOTP1-201ENST00000443317 2398 ntBASIC4.25□□□□□ -1.73
SLC44A3Q8N4M1 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SLC44A3Q8N4M1 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.25□□□□□ -1.73
SLC44A3Q8N4M1 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SLC44A3Q8N4M1 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SLC44A3Q8N4M1 RNU6-853P-201ENST00000364306 107 ntBASIC4.25□□□□□ -1.73
SLC44A3Q8N4M1 RNU6-169P-201ENST00000365336 107 ntBASIC4.25□□□□□ -1.73
SLC44A3Q8N4M1 Y_RNA.394-201ENST00000383942 103 ntBASIC4.25□□□□□ -1.73
SLC44A3Q8N4M1 RNU6-1293P-201ENST00000384077 107 ntBASIC4.25□□□□□ -1.73
SLC44A3Q8N4M1 MIR92A2-201ENST00000385299 75 ntBASIC4.25□□□□□ -1.73
SLC44A3Q8N4M1 SNORD66.1-201ENST00000391230 76 ntBASIC4.25□□□□□ -1.73
SLC44A3Q8N4M1 AL023807.1-201ENST00000407932 359 ntBASIC4.25□□□□□ -1.73
SLC44A3Q8N4M1 MIR1911-201ENST00000410783 80 ntBASIC4.25□□□□□ -1.73
SLC44A3Q8N4M1 GSTM3P2-201ENST00000412746 530 ntBASIC4.25□□□□□ -1.73
SLC44A3Q8N4M1 MRPL50P2-201ENST00000416821 482 ntBASIC4.25□□□□□ -1.73
SLC44A3Q8N4M1 AL606489.2-201ENST00000433886 234 ntBASIC4.25□□□□□ -1.73
SLC44A3Q8N4M1 RPS20P1-201ENST00000434853 354 ntBASIC4.25□□□□□ -1.73
SLC44A3Q8N4M1 AC006011.1-201ENST00000442758 349 ntBASIC4.25□□□□□ -1.73
SLC44A3Q8N4M1 TRBV26-201ENST00000456572 344 ntBASIC4.25□□□□□ -1.73
SLC44A3Q8N4M1 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.25□□□□□ -1.73
SLC44A3Q8N4M1 RNU6-261P-201ENST00000459506 102 ntBASIC4.25□□□□□ -1.73
SLC44A3Q8N4M1 AC108022.1-201ENST00000493466 478 ntBASIC4.25□□□□□ -1.73
SLC44A3Q8N4M1 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.25□□□□□ -1.73
SLC44A3Q8N4M1 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.25□□□□□ -1.73
SLC44A3Q8N4M1 HMGN1P13-201ENST00000505795 138 ntBASIC4.25□□□□□ -1.73
SLC44A3Q8N4M1 AC010587.1-201ENST00000505809 469 ntBASIC4.25□□□□□ -1.73
SLC44A3Q8N4M1 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.25□□□□□ -1.73
SLC44A3Q8N4M1 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.25□□□□□ -1.73
SLC44A3Q8N4M1 AC090572.1-201ENST00000519251 160 ntBASIC4.25□□□□□ -1.73
SLC44A3Q8N4M1 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.25□□□□□ -1.73
SLC44A3Q8N4M1 AC022861.1-201ENST00000522981 663 ntBASIC4.25□□□□□ -1.73
SLC44A3Q8N4M1 AC022616.3-201ENST00000523940 148 ntBASIC4.25□□□□□ -1.73
SLC44A3Q8N4M1 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.25□□□□□ -1.73
SLC44A3Q8N4M1 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.25□□□□□ -1.73
SLC44A3Q8N4M1 AC010928.3-201ENST00000587712 541 ntBASIC4.25□□□□□ -1.73
SLC44A3Q8N4M1 AC011712.1-201ENST00000588959 234 ntBASIC4.25□□□□□ -1.73
SLC44A3Q8N4M1 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.25□□□□□ -1.73
SLC44A3Q8N4M1 AC013553.2-201ENST00000604244 589 ntBASIC4.25□□□□□ -1.73
SLC44A3Q8N4M1 AC007179.3-201ENST00000604976 235 ntBASIC4.25□□□□□ -1.73
SLC44A3Q8N4M1 AL355472.4-201ENST00000610233 626 ntBASIC4.25□□□□□ -1.73
SLC44A3Q8N4M1 PART1_1.1-201ENST00000611761 217 ntBASIC4.25□□□□□ -1.73
SLC44A3Q8N4M1 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SLC44A3Q8N4M1 AC084757.4-201ENST00000616350 526 ntBASIC4.25□□□□□ -1.73
SLC44A3Q8N4M1 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SLC44A3Q8N4M1 RNU6-156P-201ENST00000621869 107 ntBASIC4.25□□□□□ -1.73
SLC44A3Q8N4M1 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.25□□□□□ -1.73
SLC44A3Q8N4M1 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
SLC44A3Q8N4M1 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SLC44A3Q8N4M1 MTND5P33-201ENST00000571250 1450 ntBASIC4.24□□□□□ -1.73
SLC44A3Q8N4M1 AC068254.2-201ENST00000623938 3577 ntBASIC4.24□□□□□ -1.73
SLC44A3Q8N4M1 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.24□□□□□ -1.73
SLC44A3Q8N4M1 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.24□□□□□ -1.73
SLC44A3Q8N4M1 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SLC44A3Q8N4M1 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SLC44A3Q8N4M1 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SLC44A3Q8N4M1 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.24□□□□□ -1.73
SLC44A3Q8N4M1 RNU6-1120P-201ENST00000362988 108 ntBASIC4.24□□□□□ -1.73
SLC44A3Q8N4M1 RNU6-108P-201ENST00000365558 107 ntBASIC4.24□□□□□ -1.73
SLC44A3Q8N4M1 SNORA69-201ENST00000383895 132 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms