Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC098679.5-201ENST00000624394 571 ntBASIC2.57□□□□□ -2
VPS8Q8N3P4 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
VPS8Q8N3P4 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.57□□□□□ -2
VPS8Q8N3P4 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.56□□□□□ -2
VPS8Q8N3P4 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
VPS8Q8N3P4 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.56□□□□□ -2
VPS8Q8N3P4 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.56□□□□□ -2
VPS8Q8N3P4 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.56□□□□□ -2
VPS8Q8N3P4 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.56□□□□□ -2
VPS8Q8N3P4 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.56□□□□□ -2
VPS8Q8N3P4 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.56□□□□□ -2
VPS8Q8N3P4 DUXAP4-201ENST00000603046 613 ntBASIC2.56□□□□□ -2
VPS8Q8N3P4 MIR502-201ENST00000606349 86 ntBASIC2.56□□□□□ -2
VPS8Q8N3P4 snoU13.31-201ENST00000607291 104 ntBASIC2.56□□□□□ -2
VPS8Q8N3P4 AL353748.2-201ENST00000622148 471 ntBASIC2.56□□□□□ -2
VPS8Q8N3P4 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
VPS8Q8N3P4 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
VPS8Q8N3P4 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
VPS8Q8N3P4 SNORA7.2-201ENST00000364446 145 ntBASIC2.55□□□□□ -2
VPS8Q8N3P4 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.55□□□□□ -2
VPS8Q8N3P4 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.55□□□□□ -2
VPS8Q8N3P4 UBBP3-201ENST00000445497 241 ntBASIC2.55□□□□□ -2
VPS8Q8N3P4 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.55□□□□□ -2
VPS8Q8N3P4 MTCO2P9-201ENST00000503214 694 ntBASIC2.55□□□□□ -2
VPS8Q8N3P4 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC2.55□□□□□ -2
VPS8Q8N3P4 KC877982.1-201ENST00000602313 470 ntBASIC2.55□□□□□ -2
VPS8Q8N3P4 BX248123.2-201ENST00000606318 124 ntBASIC2.55□□□□□ -2
VPS8Q8N3P4 AC091046.2-201ENST00000620775 665 ntBASIC2.55□□□□□ -2
VPS8Q8N3P4 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
VPS8Q8N3P4 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.55□□□□□ -2
VPS8Q8N3P4 AL450338.1-201ENST00000407987 512 ntBASIC2.54□□□□□ -2
VPS8Q8N3P4 RNA5SP492-201ENST00000411330 114 ntBASIC2.54□□□□□ -2
VPS8Q8N3P4 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.54□□□□□ -2
VPS8Q8N3P4 RPL23AP58-201ENST00000440453 469 ntBASIC2.54□□□□□ -2
VPS8Q8N3P4 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.54□□□□□ -2
VPS8Q8N3P4 AC069277.2-201ENST00000454211 432 ntBASIC2.54□□□□□ -2
VPS8Q8N3P4 AC146507.1-201ENST00000468335 354 ntBASIC2.54□□□□□ -2
VPS8Q8N3P4 RPL23AP55-201ENST00000498163 452 ntBASIC2.54□□□□□ -2
VPS8Q8N3P4 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.54□□□□□ -2
VPS8Q8N3P4 AC109471.1-201ENST00000511631 612 ntBASIC2.54□□□□□ -2
VPS8Q8N3P4 IGLV3-17-201ENST00000519099 244 ntBASIC2.54□□□□□ -2
VPS8Q8N3P4 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.54□□□□□ -2
VPS8Q8N3P4 MIR4446-201ENST00000578505 67 ntBASIC2.54□□□□□ -2
VPS8Q8N3P4 AL390240.1-201ENST00000612950 384 ntBASIC2.54□□□□□ -2
VPS8Q8N3P4 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.53□□□□□ -2
VPS8Q8N3P4 RNU4-52P-201ENST00000384209 138 ntBASIC2.53□□□□□ -2
VPS8Q8N3P4 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.53□□□□□ -2
VPS8Q8N3P4 BX682237.1-201ENST00000415016 335 ntBASIC2.53□□□□□ -2
VPS8Q8N3P4 BX510359.4-201ENST00000423750 193 ntBASIC2.53□□□□□ -2
VPS8Q8N3P4 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC2.53□□□□□ -2
VPS8Q8N3P4 TRBV8-1-201ENST00000481590 279 ntBASIC2.53□□□□□ -2
VPS8Q8N3P4 RPS29P20-201ENST00000489592 171 ntBASIC2.53□□□□□ -2
VPS8Q8N3P4 AC023424.2-201ENST00000493479 777 ntBASIC2.53□□□□□ -2
VPS8Q8N3P4 SEM1P1-201ENST00000506694 209 ntBASIC2.53□□□□□ -2
VPS8Q8N3P4 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.53□□□□□ -2
VPS8Q8N3P4 AC084851.1-201ENST00000529105 249 ntBASIC2.53□□□□□ -2
VPS8Q8N3P4 AC007115.1-201ENST00000546853 234 ntBASIC2.53□□□□□ -2
VPS8Q8N3P4 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.53□□□□□ -2
VPS8Q8N3P4 OR4K8P-201ENST00000578842 1048 ntBASIC2.53□□□□□ -2
VPS8Q8N3P4 VN1R80P-201ENST00000597126 338 ntBASIC2.53□□□□□ -2
VPS8Q8N3P4 AL158801.5-201ENST00000623123 465 ntBASIC2.53□□□□□ -2
VPS8Q8N3P4 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC2.53□□□□□ -2
VPS8Q8N3P4 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
VPS8Q8N3P4 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.53□□□□□ -2
VPS8Q8N3P4 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.53□□□□□ -2
VPS8Q8N3P4 AC090740.1-201ENST00000623193 2262 ntBASIC2.53□□□□□ -2
VPS8Q8N3P4 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
VPS8Q8N3P4 FO393413.1-201ENST00000402892 195 ntBASIC2.52□□□□□ -2.01
VPS8Q8N3P4 AL021407.1-201ENST00000404531 386 ntBASIC2.52□□□□□ -2.01
VPS8Q8N3P4 RNU4-62P-201ENST00000410125 130 ntBASIC2.52□□□□□ -2.01
VPS8Q8N3P4 RNA5SP270-201ENST00000411361 118 ntBASIC2.52□□□□□ -2.01
VPS8Q8N3P4 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.52□□□□□ -2.01
VPS8Q8N3P4 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
VPS8Q8N3P4 AP004372.1-201ENST00000604842 844 ntBASIC2.52□□□□□ -2.01
VPS8Q8N3P4 HSPE1P14-201ENST00000605812 302 ntBASIC2.52□□□□□ -2.01
VPS8Q8N3P4 uc_338.20-201ENST00000621563 178 ntBASIC2.52□□□□□ -2.01
VPS8Q8N3P4 AP000676.4-201ENST00000624659 623 ntBASIC2.52□□□□□ -2.01
VPS8Q8N3P4 MTND4P23-201ENST00000447723 1363 ntBASIC2.52□□□□□ -2.01
VPS8Q8N3P4 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
VPS8Q8N3P4 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC2.52□□□□□ -2.01
VPS8Q8N3P4 RNU4-13P-201ENST00000364019 141 ntBASIC2.51□□□□□ -2.01
VPS8Q8N3P4 SNORA67.5-201ENST00000391036 107 ntBASIC2.51□□□□□ -2.01
VPS8Q8N3P4 MCTS2P-201ENST00000394552 546 ntBASIC2.51□□□□□ -2.01
VPS8Q8N3P4 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
VPS8Q8N3P4 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC2.51□□□□□ -2.01
VPS8Q8N3P4 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.51□□□□□ -2.01
VPS8Q8N3P4 RPL23AP76-201ENST00000441860 458 ntBASIC2.51□□□□□ -2.01
VPS8Q8N3P4 MTCYBP17-201ENST00000503579 789 ntBASIC2.51□□□□□ -2.01
VPS8Q8N3P4 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.51□□□□□ -2.01
VPS8Q8N3P4 RNU1-61P-201ENST00000516107 151 ntBASIC2.51□□□□□ -2.01
VPS8Q8N3P4 CENPUP2-201ENST00000555897 1186 ntBASIC2.51□□□□□ -2.01
VPS8Q8N3P4 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.51□□□□□ -2.01
VPS8Q8N3P4 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.51□□□□□ -2.01
VPS8Q8N3P4 AC090897.3-201ENST00000636973 1157 ntBASIC2.51□□□□□ -2.01
VPS8Q8N3P4 NSRP1P1-201ENST00000444067 1693 ntBASIC2.51□□□□□ -2.01
VPS8Q8N3P4 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.51□□□□□ -2.01
VPS8Q8N3P4 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
VPS8Q8N3P4 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
VPS8Q8N3P4 Y_RNA.338-201ENST00000365320 114 ntBASIC2.51□□□□□ -2.01
VPS8Q8N3P4 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms