Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 MIR3186-201ENST00000577404 85 ntBASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 AC006270.2-201ENST00000578523 652 ntBASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 SNORD39.3-201ENST00000584451 71 ntBASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 AL391001.1-201ENST00000602747 715 ntBASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 AC098826.3-201ENST00000603823 466 ntBASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 BNIP3P10-201ENST00000605360 577 ntBASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 AP004247.3-201ENST00000608682 624 ntBASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 AL121895.2-201ENST00000619558 447 ntBASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 MTCO1P14-201ENST00000441695 1559 ntBASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 AL157700.1-201ENST00000561973 1432 ntBASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 Y_RNA.25-201ENST00000362528 102 ntBASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 RNU6-263P-201ENST00000363811 107 ntBASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 Y_RNA.311-201ENST00000365068 96 ntBASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 RNU1-100P-201ENST00000365255 165 ntBASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 RNU6-444P-201ENST00000383988 108 ntBASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 Y_RNA.578-201ENST00000390903 88 ntBASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 AL512633.1-201ENST00000399931 655 ntBASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 AL079342.1-201ENST00000401460 267 ntBASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 MIR1289-2-201ENST00000408360 111 ntBASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 RNU2-28P-201ENST00000410457 189 ntBASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 MTATP6P20-201ENST00000414147 562 ntBASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 AL356320.2-201ENST00000417263 507 ntBASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 Z75741.2-201ENST00000417272 1167 ntBASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 MTND2P16-201ENST00000419987 799 ntBASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 DPH3P2-201ENST00000422618 250 ntBASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 GTF2IP3-201ENST00000433887 494 ntBASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 MTND4P6-201ENST00000438297 472 ntBASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 AC007327.1-201ENST00000447461 264 ntBASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 ST13P20-201ENST00000447996 1065 ntBASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 AL589880.1-201ENST00000448271 287 ntBASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 COX6CP18-201ENST00000448769 222 ntBASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 RPL23AP62-201ENST00000463396 453 ntBASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 AC087879.1-201ENST00000474343 374 ntBASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 RN7SL297P-201ENST00000483161 293 ntBASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 RPL21P131-201ENST00000497298 483 ntBASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 RNA5SP135-201ENST00000517019 125 ntBASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 AC093331.1-201ENST00000521474 169 ntBASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 AC126177.3-201ENST00000551839 688 ntBASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 AC090695.1-201ENST00000561269 1222 ntBASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 MTND1P8-201ENST00000571424 950 ntBASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 AC113368.1-201ENST00000603736 382 ntBASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 AL450472.3-201ENST00000615578 367 ntBASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 GABPAP-201ENST00000419271 1356 ntBASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 AP001350.1-201ENST00000601906 1524 ntBASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 ZNF29P-201ENST00000225587 168 ntBASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 SNORA72.3-201ENST00000365074 132 ntBASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 EI24P2-201ENST00000397776 1076 ntBASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 MTCO2P8-201ENST00000412213 658 ntBASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 AIMP1P1-201ENST00000418670 937 ntBASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 RPL31P54-201ENST00000429803 370 ntBASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 Z80107.1-201ENST00000436830 412 ntBASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 RPS12P2-201ENST00000439728 269 ntBASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 RPL36AP51-201ENST00000487216 318 ntBASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 AP000790.1-201ENST00000528891 737 ntBASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 OR5D17P-201ENST00000531492 978 ntBASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 AP000857.1-201ENST00000532151 543 ntBASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 CR383656.7-201ENST00000548164 174 ntBASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 AL389895.1-201ENST00000554127 252 ntBASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 AL049838.1-201ENST00000563647 981 ntBASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 AC007938.3-201ENST00000604965 623 ntBASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 AL157392.4-201ENST00000609756 345 ntBASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 AC130650.2-201ENST00000618736 2403 ntBASIC2.35□□□□□ -2.03
COL27A1Q8IZC6 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms