Protein–RNA interactions for Protein: Q6Q0C0

TRAF7, E3 ubiquitin-protein ligase TRAF7, humanhuman

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF7Q6Q0C0 MFSD8-239ENST00000641590 2479 ntBASIC6.2□□□□□ -1.42
TRAF7Q6Q0C0 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRAF7Q6Q0C0 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRAF7Q6Q0C0 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
TRAF7Q6Q0C0 RNU6-61P-201ENST00000365528 109 ntBASIC6.2□□□□□ -1.42
TRAF7Q6Q0C0 MIR517A-201ENST00000385001 87 ntBASIC6.2□□□□□ -1.42
TRAF7Q6Q0C0 RNU1-77P-201ENST00000390868 162 ntBASIC6.2□□□□□ -1.42
TRAF7Q6Q0C0 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
TRAF7Q6Q0C0 RNU6-516P-201ENST00000411381 104 ntBASIC6.2□□□□□ -1.42
TRAF7Q6Q0C0 AC116036.1-201ENST00000412199 367 ntBASIC6.2□□□□□ -1.42
TRAF7Q6Q0C0 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC6.2□□□□□ -1.42
TRAF7Q6Q0C0 RPL23AP38-201ENST00000423801 469 ntBASIC6.2□□□□□ -1.42
TRAF7Q6Q0C0 MTND3P9-201ENST00000429526 346 ntBASIC6.2□□□□□ -1.42
TRAF7Q6Q0C0 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.2□□□□□ -1.42
TRAF7Q6Q0C0 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC6.2□□□□□ -1.42
TRAF7Q6Q0C0 PPP1R11P1-201ENST00000486095 376 ntBASIC6.2□□□□□ -1.42
TRAF7Q6Q0C0 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC6.2□□□□□ -1.42
TRAF7Q6Q0C0 RAC1P5-201ENST00000512182 576 ntBASIC6.2□□□□□ -1.42
TRAF7Q6Q0C0 RNU6-496P-201ENST00000516145 99 ntBASIC6.2□□□□□ -1.42
TRAF7Q6Q0C0 Y_RNA.679-201ENST00000516416 91 ntBASIC6.2□□□□□ -1.42
TRAF7Q6Q0C0 Y_RNA.687-201ENST00000516558 91 ntBASIC6.2□□□□□ -1.42
TRAF7Q6Q0C0 RNU6-762P-201ENST00000517107 102 ntBASIC6.2□□□□□ -1.42
TRAF7Q6Q0C0 IGLVIV-53-201ENST00000520107 367 ntBASIC6.2□□□□□ -1.42
TRAF7Q6Q0C0 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC6.2□□□□□ -1.42
TRAF7Q6Q0C0 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC6.2□□□□□ -1.42
TRAF7Q6Q0C0 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC6.2□□□□□ -1.42
TRAF7Q6Q0C0 TGIF1P1-201ENST00000558095 802 ntBASIC6.2□□□□□ -1.42
TRAF7Q6Q0C0 AMZ2P1-203ENST00000565833 850 ntBASIC6.2□□□□□ -1.42
TRAF7Q6Q0C0 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.2□□□□□ -1.42
TRAF7Q6Q0C0 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.2□□□□□ -1.42
TRAF7Q6Q0C0 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.2□□□□□ -1.42
TRAF7Q6Q0C0 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.2□□□□□ -1.42
TRAF7Q6Q0C0 AC123786.2-201ENST00000603459 275 ntBASIC6.2□□□□□ -1.42
TRAF7Q6Q0C0 AC000068.2-201ENST00000608816 460 ntBASIC6.2□□□□□ -1.42
TRAF7Q6Q0C0 RPSAP73-201ENST00000614820 330 ntBASIC6.2□□□□□ -1.42
TRAF7Q6Q0C0 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC6.2□□□□□ -1.42
TRAF7Q6Q0C0 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
TRAF7Q6Q0C0 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRAF7Q6Q0C0 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TRAF7Q6Q0C0 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
TRAF7Q6Q0C0 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 AC007785.2-201ENST00000598627 1916 ntBASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 AC097063.1-201ENST00000426714 1797 ntBASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 SNORD113-8-201ENST00000363497 74 ntBASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 Y_RNA.151-201ENST00000363566 112 ntBASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 RNA5SP507-201ENST00000363603 121 ntBASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 RNA5SP335-201ENST00000363817 110 ntBASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 RNU6-960P-201ENST00000364056 120 ntBASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 RNU6ATAC18P-201ENST00000408413 101 ntBASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 Y_RNA.590-201ENST00000410140 107 ntBASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 RNU2-61P-201ENST00000411069 191 ntBASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 RNA5SP107-201ENST00000411358 122 ntBASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 RPLP0P7-201ENST00000416050 667 ntBASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 RPS15AP6-201ENST00000420703 385 ntBASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 RPS27P18-201ENST00000431701 247 ntBASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 CYCSP6-201ENST00000434498 302 ntBASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 PSMD10P3-201ENST00000437000 448 ntBASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 RNU7-187P-201ENST00000458985 68 ntBASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 RN7SL51P-201ENST00000468230 285 ntBASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 BX284632.1-201ENST00000478218 541 ntBASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 AC022133.1-201ENST00000490961 571 ntBASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 RPL23AP55-201ENST00000498163 452 ntBASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 RNU6-1092P-201ENST00000516955 87 ntBASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 IGLV3-24-201ENST00000517477 197 ntBASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 AC024619.4-201ENST00000580924 316 ntBASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 AC090607.5-201ENST00000615692 224 ntBASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.19□□□□□ -1.42
TRAF7Q6Q0C0 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TRAF7Q6Q0C0 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms