Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC6.34□□□□□ -1.39
RC3H1Q5TC82 AL122126.1-201ENST00000546905 1318 ntBASIC6.34□□□□□ -1.39
RC3H1Q5TC82 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RC3H1Q5TC82 RNU6-740P-201ENST00000364734 105 ntBASIC6.34□□□□□ -1.39
RC3H1Q5TC82 RNU4-42P-201ENST00000364738 142 ntBASIC6.34□□□□□ -1.39
RC3H1Q5TC82 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
RC3H1Q5TC82 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
RC3H1Q5TC82 AL024474.1-201ENST00000404655 591 ntBASIC6.34□□□□□ -1.39
RC3H1Q5TC82 RNA5SP36-201ENST00000410197 133 ntBASIC6.34□□□□□ -1.39
RC3H1Q5TC82 RNU6-293P-201ENST00000411259 106 ntBASIC6.34□□□□□ -1.39
RC3H1Q5TC82 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC6.34□□□□□ -1.39
RC3H1Q5TC82 RPL23AP1-201ENST00000428990 471 ntBASIC6.34□□□□□ -1.39
RC3H1Q5TC82 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC6.34□□□□□ -1.39
RC3H1Q5TC82 LINC01399-202ENST00000458450 244 ntBASIC6.34□□□□□ -1.39
RC3H1Q5TC82 RN7SKP67-201ENST00000515905 235 ntBASIC6.34□□□□□ -1.39
RC3H1Q5TC82 AC012339.2-201ENST00000523996 453 ntBASIC6.34□□□□□ -1.39
RC3H1Q5TC82 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC6.34□□□□□ -1.39
RC3H1Q5TC82 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC6.34□□□□□ -1.39
RC3H1Q5TC82 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
RC3H1Q5TC82 AL596245.1-201ENST00000618994 362 ntBASIC6.34□□□□□ -1.39
RC3H1Q5TC82 AC000123.2-201ENST00000623124 461 ntBASIC6.34□□□□□ -1.39
RC3H1Q5TC82 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.34□□□□□ -1.39
RC3H1Q5TC82 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
RC3H1Q5TC82 AC103710.2-202ENST00000641454 2853 ntBASIC6.34□□□□□ -1.39
RC3H1Q5TC82 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.34□□□□□ -1.39
RC3H1Q5TC82 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6.34□□□□□ -1.4
RC3H1Q5TC82 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
RC3H1Q5TC82 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.4
RC3H1Q5TC82 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC6.34□□□□□ -1.4
RC3H1Q5TC82 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC6.33□□□□□ -1.4
RC3H1Q5TC82 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.33□□□□□ -1.4
RC3H1Q5TC82 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RC3H1Q5TC82 TRIM51GP-201ENST00000534741 1350 ntBASIC6.33□□□□□ -1.4
RC3H1Q5TC82 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
RC3H1Q5TC82 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
RC3H1Q5TC82 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.33□□□□□ -1.4
RC3H1Q5TC82 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.33□□□□□ -1.4
RC3H1Q5TC82 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
RC3H1Q5TC82 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RC3H1Q5TC82 Y_RNA.65-201ENST00000362846 100 ntBASIC6.33□□□□□ -1.4
RC3H1Q5TC82 RNU5E-6P-201ENST00000365574 115 ntBASIC6.33□□□□□ -1.4
RC3H1Q5TC82 Y_RNA.399-201ENST00000383955 105 ntBASIC6.33□□□□□ -1.4
RC3H1Q5TC82 ELOCP19-201ENST00000411919 318 ntBASIC6.33□□□□□ -1.4
RC3H1Q5TC82 RPL21P24-201ENST00000413752 448 ntBASIC6.33□□□□□ -1.4
RC3H1Q5TC82 RPL7P2-201ENST00000427639 268 ntBASIC6.33□□□□□ -1.4
RC3H1Q5TC82 AC097713.2-201ENST00000430199 356 ntBASIC6.33□□□□□ -1.4
RC3H1Q5TC82 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC6.33□□□□□ -1.4
RC3H1Q5TC82 AC016696.1-201ENST00000446949 318 ntBASIC6.33□□□□□ -1.4
RC3H1Q5TC82 RN7SL441P-201ENST00000492388 296 ntBASIC6.33□□□□□ -1.4
RC3H1Q5TC82 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC6.33□□□□□ -1.4
RC3H1Q5TC82 AC096745.1-201ENST00000509945 370 ntBASIC6.33□□□□□ -1.4
RC3H1Q5TC82 AC098976.1-201ENST00000513014 541 ntBASIC6.33□□□□□ -1.4
RC3H1Q5TC82 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC6.33□□□□□ -1.4
RC3H1Q5TC82 RNU6-323P-201ENST00000521915 107 ntBASIC6.33□□□□□ -1.4
RC3H1Q5TC82 FAM60DP-201ENST00000524174 632 ntBASIC6.33□□□□□ -1.4
RC3H1Q5TC82 CARD16-203ENST00000525374 503 ntTSL 3 BASIC6.33□□□□□ -1.4
RC3H1Q5TC82 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RC3H1Q5TC82 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC6.33□□□□□ -1.4
RC3H1Q5TC82 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RC3H1Q5TC82 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RC3H1Q5TC82 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
RC3H1Q5TC82 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC6.33□□□□□ -1.4
RC3H1Q5TC82 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
RC3H1Q5TC82 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
RC3H1Q5TC82 SMG1P7-201ENST00000565246 2704 ntBASIC6.33□□□□□ -1.4
RC3H1Q5TC82 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RC3H1Q5TC82 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RC3H1Q5TC82 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RC3H1Q5TC82 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RC3H1Q5TC82 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RC3H1Q5TC82 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RC3H1Q5TC82 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RC3H1Q5TC82 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RC3H1Q5TC82 DDX18P3-201ENST00000404856 2007 ntBASIC6.32□□□□□ -1.4
RC3H1Q5TC82 ZNF33CP-201ENST00000432492 2030 ntBASIC6.32□□□□□ -1.4
RC3H1Q5TC82 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.32□□□□□ -1.4
RC3H1Q5TC82 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC6.32□□□□□ -1.4
RC3H1Q5TC82 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.32□□□□□ -1.4
RC3H1Q5TC82 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RC3H1Q5TC82 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
RC3H1Q5TC82 RN7SKP185-201ENST00000362813 326 ntBASIC6.32□□□□□ -1.4
RC3H1Q5TC82 Y_RNA.200-201ENST00000364018 102 ntBASIC6.32□□□□□ -1.4
RC3H1Q5TC82 RNU6-188P-201ENST00000364207 107 ntBASIC6.32□□□□□ -1.4
RC3H1Q5TC82 RNU4-50P-201ENST00000364361 141 ntBASIC6.32□□□□□ -1.4
RC3H1Q5TC82 Y_RNA.577-201ENST00000384794 101 ntBASIC6.32□□□□□ -1.4
RC3H1Q5TC82 RNU11-201ENST00000387069 134 ntBASIC6.32□□□□□ -1.4
RC3H1Q5TC82 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
RC3H1Q5TC82 SNORD70.1-201ENST00000391007 85 ntBASIC6.32□□□□□ -1.4
RC3H1Q5TC82 Y_RNA.793-201ENST00000411222 111 ntBASIC6.32□□□□□ -1.4
RC3H1Q5TC82 AC114755.2-201ENST00000413520 361 ntBASIC6.32□□□□□ -1.4
RC3H1Q5TC82 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC6.32□□□□□ -1.4
RC3H1Q5TC82 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RC3H1Q5TC82 AC090804.1-201ENST00000448870 490 ntBASIC6.32□□□□□ -1.4
RC3H1Q5TC82 CEACAMP6-201ENST00000452007 574 ntBASIC6.32□□□□□ -1.4
RC3H1Q5TC82 RPS5P7-201ENST00000456664 608 ntBASIC6.32□□□□□ -1.4
RC3H1Q5TC82 RNU7-167P-201ENST00000459160 62 ntBASIC6.32□□□□□ -1.4
RC3H1Q5TC82 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC6.32□□□□□ -1.4
RC3H1Q5TC82 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC6.32□□□□□ -1.4
RC3H1Q5TC82 RN7SKP122-201ENST00000515923 296 ntBASIC6.32□□□□□ -1.4
RC3H1Q5TC82 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms