Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.13□□□□□ -1.75
TTC39AQ5SRH9 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TTC39AQ5SRH9 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.13□□□□□ -1.75
TTC39AQ5SRH9 RN7SL601P-201ENST00000471221 293 ntBASIC4.13□□□□□ -1.75
TTC39AQ5SRH9 AC087879.1-201ENST00000474343 374 ntBASIC4.13□□□□□ -1.75
TTC39AQ5SRH9 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.13□□□□□ -1.75
TTC39AQ5SRH9 AC078918.1-201ENST00000498515 228 ntBASIC4.13□□□□□ -1.75
TTC39AQ5SRH9 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.13□□□□□ -1.75
TTC39AQ5SRH9 AC116347.2-201ENST00000514912 523 ntBASIC4.13□□□□□ -1.75
TTC39AQ5SRH9 RNA5SP216-201ENST00000516111 123 ntBASIC4.13□□□□□ -1.75
TTC39AQ5SRH9 RNU6-405P-201ENST00000516637 110 ntBASIC4.13□□□□□ -1.75
TTC39AQ5SRH9 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC4.13□□□□□ -1.75
TTC39AQ5SRH9 AP003392.2-201ENST00000527269 208 ntBASIC4.13□□□□□ -1.75
TTC39AQ5SRH9 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.13□□□□□ -1.75
TTC39AQ5SRH9 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.13□□□□□ -1.75
TTC39AQ5SRH9 AC245505.1-201ENST00000556398 224 ntBASIC4.13□□□□□ -1.75
TTC39AQ5SRH9 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.13□□□□□ -1.75
TTC39AQ5SRH9 AP001094.1-201ENST00000579805 193 ntBASIC4.13□□□□□ -1.75
TTC39AQ5SRH9 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.13□□□□□ -1.75
TTC39AQ5SRH9 AC107304.1-201ENST00000604229 296 ntBASIC4.13□□□□□ -1.75
TTC39AQ5SRH9 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.13□□□□□ -1.75
TTC39AQ5SRH9 AC097468.3-201ENST00000607956 456 ntBASIC4.13□□□□□ -1.75
TTC39AQ5SRH9 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.13□□□□□ -1.75
TTC39AQ5SRH9 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.13□□□□□ -1.75
TTC39AQ5SRH9 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.13□□□□□ -1.75
TTC39AQ5SRH9 AC011978.2-201ENST00000569835 2054 ntBASIC4.13□□□□□ -1.75
TTC39AQ5SRH9 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TTC39AQ5SRH9 MTND5P1-201ENST00000445440 1375 ntBASIC4.13□□□□□ -1.75
TTC39AQ5SRH9 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.13□□□□□ -1.75
TTC39AQ5SRH9 TEX21P-201ENST00000447107 1476 ntBASIC4.12□□□□□ -1.75
TTC39AQ5SRH9 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
TTC39AQ5SRH9 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.12□□□□□ -1.75
TTC39AQ5SRH9 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
TTC39AQ5SRH9 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
TTC39AQ5SRH9 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
TTC39AQ5SRH9 MIR423-201ENST00000362201 94 ntBASIC4.12□□□□□ -1.75
TTC39AQ5SRH9 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.12□□□□□ -1.75
TTC39AQ5SRH9 RNU6-517P-201ENST00000384362 110 ntBASIC4.12□□□□□ -1.75
TTC39AQ5SRH9 RNU6-348P-201ENST00000384386 107 ntBASIC4.12□□□□□ -1.75
TTC39AQ5SRH9 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TTC39AQ5SRH9 RHEBP3-201ENST00000411920 351 ntBASIC4.12□□□□□ -1.75
TTC39AQ5SRH9 RPL17P12-201ENST00000413391 526 ntBASIC4.12□□□□□ -1.75
TTC39AQ5SRH9 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC4.12□□□□□ -1.75
TTC39AQ5SRH9 RPS27AP14-201ENST00000422868 454 ntBASIC4.12□□□□□ -1.75
TTC39AQ5SRH9 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.12□□□□□ -1.75
TTC39AQ5SRH9 AC096632.1-201ENST00000427395 310 ntBASIC4.12□□□□□ -1.75
TTC39AQ5SRH9 AC104651.1-201ENST00000427559 735 ntBASIC4.12□□□□□ -1.75
TTC39AQ5SRH9 AC005300.1-201ENST00000428401 373 ntBASIC4.12□□□□□ -1.75
TTC39AQ5SRH9 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.12□□□□□ -1.75
TTC39AQ5SRH9 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.12□□□□□ -1.75
TTC39AQ5SRH9 AL158071.1-201ENST00000430315 461 ntBASIC4.12□□□□□ -1.75
TTC39AQ5SRH9 AL031667.1-201ENST00000440222 725 ntBASIC4.12□□□□□ -1.75
TTC39AQ5SRH9 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.12□□□□□ -1.75
TTC39AQ5SRH9 MTCO1P27-201ENST00000448269 226 ntBASIC4.12□□□□□ -1.75
TTC39AQ5SRH9 SUMO2P2-201ENST00000456482 255 ntBASIC4.12□□□□□ -1.75
TTC39AQ5SRH9 SRRM1P2-201ENST00000464531 1192 ntBASIC4.12□□□□□ -1.75
TTC39AQ5SRH9 RPL32P34-201ENST00000486380 400 ntBASIC4.12□□□□□ -1.75
TTC39AQ5SRH9 AC114981.1-201ENST00000503897 678 ntBASIC4.12□□□□□ -1.75
TTC39AQ5SRH9 AC021146.1-201ENST00000511202 716 ntBASIC4.12□□□□□ -1.75
TTC39AQ5SRH9 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TTC39AQ5SRH9 APOOP4-201ENST00000513530 597 ntBASIC4.12□□□□□ -1.75
TTC39AQ5SRH9 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TTC39AQ5SRH9 ZNF705CP-201ENST00000530515 889 ntBASIC4.12□□□□□ -1.75
TTC39AQ5SRH9 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.12□□□□□ -1.75
TTC39AQ5SRH9 OR8L1P-201ENST00000534005 955 ntBASIC4.12□□□□□ -1.75
TTC39AQ5SRH9 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.12□□□□□ -1.75
TTC39AQ5SRH9 LSM6P2-201ENST00000552208 177 ntBASIC4.12□□□□□ -1.75
TTC39AQ5SRH9 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.12□□□□□ -1.75
TTC39AQ5SRH9 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.12□□□□□ -1.75
TTC39AQ5SRH9 ZNF192P1-203ENST00000565888 810 ntBASIC4.12□□□□□ -1.75
TTC39AQ5SRH9 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.12□□□□□ -1.75
TTC39AQ5SRH9 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.12□□□□□ -1.75
TTC39AQ5SRH9 MIR4644-201ENST00000579929 84 ntBASIC4.12□□□□□ -1.75
TTC39AQ5SRH9 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.12□□□□□ -1.75
TTC39AQ5SRH9 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.12□□□□□ -1.75
TTC39AQ5SRH9 AP000403.1-201ENST00000603349 851 ntBASIC4.12□□□□□ -1.75
TTC39AQ5SRH9 SEPT7P9-203ENST00000604116 343 ntBASIC4.12□□□□□ -1.75
TTC39AQ5SRH9 AC006566.1-201ENST00000608943 513 ntBASIC4.12□□□□□ -1.75
TTC39AQ5SRH9 AC096577.2-201ENST00000611455 153 ntBASIC4.12□□□□□ -1.75
TTC39AQ5SRH9 AC138932.5-201ENST00000617759 563 ntBASIC4.12□□□□□ -1.75
TTC39AQ5SRH9 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.12□□□□□ -1.75
TTC39AQ5SRH9 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
TTC39AQ5SRH9 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TTC39AQ5SRH9 RNA5SP189-201ENST00000364920 115 ntBASIC4.11□□□□□ -1.75
TTC39AQ5SRH9 Y_RNA.333-201ENST00000365274 102 ntBASIC4.11□□□□□ -1.75
TTC39AQ5SRH9 SNORA51.6-201ENST00000384151 125 ntBASIC4.11□□□□□ -1.75
TTC39AQ5SRH9 Y_RNA.516-201ENST00000384541 124 ntBASIC4.11□□□□□ -1.75
TTC39AQ5SRH9 U8.14-201ENST00000390843 143 ntBASIC4.11□□□□□ -1.75
TTC39AQ5SRH9 RNU6-952P-201ENST00000391164 108 ntBASIC4.11□□□□□ -1.75
TTC39AQ5SRH9 PTMAP5-201ENST00000393073 333 ntBASIC4.11□□□□□ -1.75
TTC39AQ5SRH9 RNU2-66P-201ENST00000410650 161 ntBASIC4.11□□□□□ -1.75
TTC39AQ5SRH9 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC4.11□□□□□ -1.75
TTC39AQ5SRH9 AL133384.1-201ENST00000412744 351 ntBASIC4.11□□□□□ -1.75
TTC39AQ5SRH9 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.11□□□□□ -1.75
TTC39AQ5SRH9 MTCO3P30-201ENST00000426425 670 ntBASIC4.11□□□□□ -1.75
TTC39AQ5SRH9 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC4.11□□□□□ -1.75
TTC39AQ5SRH9 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.11□□□□□ -1.75
TTC39AQ5SRH9 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.11□□□□□ -1.75
TTC39AQ5SRH9 RPL7P28-201ENST00000437739 740 ntBASIC4.11□□□□□ -1.75
TTC39AQ5SRH9 RPS26P56-201ENST00000444468 240 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms