Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 AL732372.2-225ENST00000642124 456 ntBASIC3.77□□□□□ -1.81
USP41Q3LFD5 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.77□□□□□ -1.81
USP41Q3LFD5 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.77□□□□□ -1.81
USP41Q3LFD5 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.77□□□□□ -1.81
USP41Q3LFD5 AC006378.2-201ENST00000623178 2476 ntBASIC3.76□□□□□ -1.81
USP41Q3LFD5 RNA5SP167-201ENST00000365461 116 ntBASIC3.76□□□□□ -1.81
USP41Q3LFD5 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
USP41Q3LFD5 SNORD17-201ENST00000390930 237 ntBASIC3.76□□□□□ -1.81
USP41Q3LFD5 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.76□□□□□ -1.81
USP41Q3LFD5 AC016907.1-201ENST00000419483 435 ntBASIC3.76□□□□□ -1.81
USP41Q3LFD5 AC244098.2-201ENST00000422068 99 ntBASIC3.76□□□□□ -1.81
USP41Q3LFD5 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.76□□□□□ -1.81
USP41Q3LFD5 CYCSP46-201ENST00000423569 204 ntBASIC3.76□□□□□ -1.81
USP41Q3LFD5 BX119904.4-201ENST00000424402 301 ntBASIC3.76□□□□□ -1.81
USP41Q3LFD5 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
USP41Q3LFD5 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.76□□□□□ -1.81
USP41Q3LFD5 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.76□□□□□ -1.81
USP41Q3LFD5 EZH2P1-201ENST00000431167 291 ntBASIC3.76□□□□□ -1.81
USP41Q3LFD5 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.76□□□□□ -1.81
USP41Q3LFD5 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.76□□□□□ -1.81
USP41Q3LFD5 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
USP41Q3LFD5 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
USP41Q3LFD5 RPS20P32-201ENST00000456044 356 ntBASIC3.76□□□□□ -1.81
USP41Q3LFD5 AC034222.1-201ENST00000494052 532 ntBASIC3.76□□□□□ -1.81
USP41Q3LFD5 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.76□□□□□ -1.81
USP41Q3LFD5 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.76□□□□□ -1.81
USP41Q3LFD5 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.76□□□□□ -1.81
USP41Q3LFD5 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.76□□□□□ -1.81
USP41Q3LFD5 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.76□□□□□ -1.81
USP41Q3LFD5 AC126177.3-201ENST00000551839 688 ntBASIC3.76□□□□□ -1.81
USP41Q3LFD5 SETP7-201ENST00000552169 453 ntBASIC3.76□□□□□ -1.81
USP41Q3LFD5 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.76□□□□□ -1.81
USP41Q3LFD5 AP001981.2-201ENST00000603241 418 ntBASIC3.76□□□□□ -1.81
USP41Q3LFD5 AC091965.4-201ENST00000607691 587 ntBASIC3.76□□□□□ -1.81
USP41Q3LFD5 AC027807.2-201ENST00000616099 408 ntBASIC3.76□□□□□ -1.81
USP41Q3LFD5 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.76□□□□□ -1.81
USP41Q3LFD5 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.76□□□□□ -1.81
USP41Q3LFD5 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.76□□□□□ -1.81
USP41Q3LFD5 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
USP41Q3LFD5 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
USP41Q3LFD5 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.75□□□□□ -1.81
USP41Q3LFD5 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.75□□□□□ -1.81
USP41Q3LFD5 AC066616.2-201ENST00000559334 1481 ntBASIC3.75□□□□□ -1.81
USP41Q3LFD5 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
USP41Q3LFD5 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
USP41Q3LFD5 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
USP41Q3LFD5 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
USP41Q3LFD5 MIR184-201ENST00000384962 84 ntBASIC3.75□□□□□ -1.81
USP41Q3LFD5 RN7SKP285-201ENST00000410137 318 ntBASIC3.75□□□□□ -1.81
USP41Q3LFD5 RNU6-712P-201ENST00000410558 100 ntBASIC3.75□□□□□ -1.81
USP41Q3LFD5 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.75□□□□□ -1.81
USP41Q3LFD5 AC005326.1-201ENST00000429197 123 ntBASIC3.75□□□□□ -1.81
USP41Q3LFD5 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.75□□□□□ -1.81
USP41Q3LFD5 MTND4LP10-201ENST00000435146 291 ntBASIC3.75□□□□□ -1.81
USP41Q3LFD5 AC091862.1-201ENST00000438016 1100 ntBASIC3.75□□□□□ -1.81
USP41Q3LFD5 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.75□□□□□ -1.81
USP41Q3LFD5 RPL7P36-201ENST00000444633 681 ntBASIC3.75□□□□□ -1.81
USP41Q3LFD5 COX6CP2-201ENST00000444980 225 ntBASIC3.75□□□□□ -1.81
USP41Q3LFD5 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.75□□□□□ -1.81
USP41Q3LFD5 SNRPGP9-201ENST00000456025 225 ntBASIC3.75□□□□□ -1.81
USP41Q3LFD5 RPL23AP14-201ENST00000468281 468 ntBASIC3.75□□□□□ -1.81
USP41Q3LFD5 AP000797.1-201ENST00000478870 387 ntBASIC3.75□□□□□ -1.81
USP41Q3LFD5 AC078918.1-201ENST00000498515 228 ntBASIC3.75□□□□□ -1.81
USP41Q3LFD5 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.75□□□□□ -1.81
USP41Q3LFD5 PCBP2P3-201ENST00000509726 843 ntBASIC3.75□□□□□ -1.81
USP41Q3LFD5 ARL2BPP6-201ENST00000512757 439 ntBASIC3.75□□□□□ -1.81
USP41Q3LFD5 MTND4LP18-201ENST00000526864 291 ntBASIC3.75□□□□□ -1.81
USP41Q3LFD5 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.75□□□□□ -1.81
USP41Q3LFD5 AC034268.2-201ENST00000571784 482 ntBASIC3.75□□□□□ -1.81
USP41Q3LFD5 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
USP41Q3LFD5 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.75□□□□□ -1.81
USP41Q3LFD5 MIR548AB-201ENST00000584917 84 ntBASIC3.75□□□□□ -1.81
USP41Q3LFD5 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.75□□□□□ -1.81
USP41Q3LFD5 AC010928.3-201ENST00000587712 541 ntBASIC3.75□□□□□ -1.81
USP41Q3LFD5 AC012669.1-201ENST00000603209 283 ntBASIC3.75□□□□□ -1.81
USP41Q3LFD5 AC128687.1-201ENST00000605304 619 ntBASIC3.75□□□□□ -1.81
USP41Q3LFD5 AC239868.4-201ENST00000608318 671 ntBASIC3.75□□□□□ -1.81
USP41Q3LFD5 AL590099.1-201ENST00000615276 138 ntBASIC3.75□□□□□ -1.81
USP41Q3LFD5 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.75□□□□□ -1.81
USP41Q3LFD5 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.75□□□□□ -1.81
USP41Q3LFD5 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.75□□□□□ -1.81
USP41Q3LFD5 AC244517.1-201ENST00000606030 2086 ntBASIC3.75□□□□□ -1.81
USP41Q3LFD5 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.75□□□□□ -1.81
USP41Q3LFD5 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.75□□□□□ -1.81
USP41Q3LFD5 AC058791.1-201ENST00000608412 3198 ntBASIC3.75□□□□□ -1.81
USP41Q3LFD5 AC032011.1-201ENST00000611703 1549 ntBASIC3.75□□□□□ -1.81
USP41Q3LFD5 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
USP41Q3LFD5 AC092447.10-201ENST00000620607 1652 ntBASIC3.75□□□□□ -1.81
USP41Q3LFD5 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
USP41Q3LFD5 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
USP41Q3LFD5 AC007656.2-201ENST00000624902 4547 ntBASIC3.74□□□□□ -1.81
USP41Q3LFD5 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
USP41Q3LFD5 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
USP41Q3LFD5 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
USP41Q3LFD5 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
USP41Q3LFD5 FRG1CP-201ENST00000358464 769 ntBASIC3.74□□□□□ -1.81
USP41Q3LFD5 RNU6-809P-201ENST00000384461 107 ntBASIC3.74□□□□□ -1.81
USP41Q3LFD5 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
USP41Q3LFD5 U3.19-201ENST00000390893 196 ntBASIC3.74□□□□□ -1.81
USP41Q3LFD5 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms