Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
PCDH1Q08174 SNORA41-201ENST00000384675 132 ntBASIC5.09□□□□□ -1.59
PCDH1Q08174 MIR1250-201ENST00000408098 113 ntBASIC5.09□□□□□ -1.59
PCDH1Q08174 OR3A2-201ENST00000408891 1076 ntBASIC5.09□□□□□ -1.59
PCDH1Q08174 AL137014.1-201ENST00000420490 1226 ntBASIC5.09□□□□□ -1.59
PCDH1Q08174 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC5.09□□□□□ -1.59
PCDH1Q08174 AL645568.3-201ENST00000433683 316 ntBASIC5.09□□□□□ -1.59
PCDH1Q08174 GAPDHP58-201ENST00000438477 1006 ntBASIC5.09□□□□□ -1.59
PCDH1Q08174 AC099799.1-201ENST00000439809 192 ntBASIC5.09□□□□□ -1.59
PCDH1Q08174 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.09□□□□□ -1.59
PCDH1Q08174 AC245028.2-201ENST00000458673 253 ntBASIC5.09□□□□□ -1.59
PCDH1Q08174 RN7SL189P-201ENST00000468631 289 ntBASIC5.09□□□□□ -1.59
PCDH1Q08174 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.09□□□□□ -1.59
PCDH1Q08174 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC5.09□□□□□ -1.59
PCDH1Q08174 AC009901.1-201ENST00000506703 541 ntBASIC5.09□□□□□ -1.59
PCDH1Q08174 AC107222.1-201ENST00000510899 637 ntBASIC5.09□□□□□ -1.59
PCDH1Q08174 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.09□□□□□ -1.59
PCDH1Q08174 RNU4-77P-201ENST00000516692 156 ntBASIC5.09□□□□□ -1.59
PCDH1Q08174 RN7SKP60-201ENST00000516985 239 ntBASIC5.09□□□□□ -1.59
PCDH1Q08174 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.09□□□□□ -1.59
PCDH1Q08174 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.09□□□□□ -1.59
PCDH1Q08174 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.09□□□□□ -1.59
PCDH1Q08174 AL355297.3-201ENST00000604082 446 ntBASIC5.09□□□□□ -1.59
PCDH1Q08174 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
PCDH1Q08174 MIR6826-201ENST00000617808 98 ntBASIC5.09□□□□□ -1.59
PCDH1Q08174 MIR6886-201ENST00000619864 61 ntBASIC5.09□□□□□ -1.59
PCDH1Q08174 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.09□□□□□ -1.59
PCDH1Q08174 AL606534.2-204ENST00000635008 178 ntBASIC5.09□□□□□ -1.59
PCDH1Q08174 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PCDH1Q08174 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.09□□□□□ -1.59
PCDH1Q08174 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PCDH1Q08174 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.09□□□□□ -1.59
PCDH1Q08174 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
PCDH1Q08174 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
PCDH1Q08174 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
PCDH1Q08174 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.09□□□□□ -1.6
PCDH1Q08174 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
PCDH1Q08174 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
PCDH1Q08174 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
PCDH1Q08174 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.6
PCDH1Q08174 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.08□□□□□ -1.6
PCDH1Q08174 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCDH1Q08174 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PCDH1Q08174 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PCDH1Q08174 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
PCDH1Q08174 AC027228.2-201ENST00000567141 2154 ntBASIC5.08□□□□□ -1.6
PCDH1Q08174 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
PCDH1Q08174 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PCDH1Q08174 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.08□□□□□ -1.6
PCDH1Q08174 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCDH1Q08174 RHOT1P2-201ENST00000366423 333 ntBASIC5.08□□□□□ -1.6
PCDH1Q08174 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PCDH1Q08174 Y_RNA.485-201ENST00000384395 102 ntBASIC5.08□□□□□ -1.6
PCDH1Q08174 Y_RNA.489-201ENST00000384410 101 ntBASIC5.08□□□□□ -1.6
PCDH1Q08174 RNU6-45P-201ENST00000384471 107 ntBASIC5.08□□□□□ -1.6
PCDH1Q08174 MIR135A2-201ENST00000384854 100 ntBASIC5.08□□□□□ -1.6
PCDH1Q08174 AC009804.1-201ENST00000400949 179 ntBASIC5.08□□□□□ -1.6
PCDH1Q08174 AC011933.1-201ENST00000413334 321 ntBASIC5.08□□□□□ -1.6
PCDH1Q08174 CEP57L1P1-201ENST00000430943 1201 ntBASIC5.08□□□□□ -1.6
PCDH1Q08174 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC5.08□□□□□ -1.6
PCDH1Q08174 RPS24P13-201ENST00000442520 397 ntBASIC5.08□□□□□ -1.6
PCDH1Q08174 MRPL48P1-201ENST00000445390 636 ntBASIC5.08□□□□□ -1.6
PCDH1Q08174 AC008264.1-201ENST00000447612 367 ntBASIC5.08□□□□□ -1.6
PCDH1Q08174 AC104634.1-201ENST00000452720 462 ntBASIC5.08□□□□□ -1.6
PCDH1Q08174 AC112492.4-201ENST00000456549 352 ntBASIC5.08□□□□□ -1.6
PCDH1Q08174 RPL37P6-202ENST00000464216 403 ntBASIC5.08□□□□□ -1.6
PCDH1Q08174 RN7SL547P-201ENST00000490793 290 ntBASIC5.08□□□□□ -1.6
PCDH1Q08174 RN7SL591P-201ENST00000496150 292 ntBASIC5.08□□□□□ -1.6
PCDH1Q08174 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.08□□□□□ -1.6
PCDH1Q08174 AC092436.3-201ENST00000511788 257 ntBASIC5.08□□□□□ -1.6
PCDH1Q08174 AC090151.1-201ENST00000520784 730 ntBASIC5.08□□□□□ -1.6
PCDH1Q08174 AP000827.1-201ENST00000527814 258 ntBASIC5.08□□□□□ -1.6
PCDH1Q08174 AC022882.1-201ENST00000532142 501 ntBASIC5.08□□□□□ -1.6
PCDH1Q08174 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.08□□□□□ -1.6
PCDH1Q08174 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC5.08□□□□□ -1.6
PCDH1Q08174 AC022884.2-201ENST00000578535 580 ntBASIC5.08□□□□□ -1.6
PCDH1Q08174 RN7SL708P-201ENST00000580952 299 ntBASIC5.08□□□□□ -1.6
PCDH1Q08174 MIR4512-201ENST00000583257 77 ntBASIC5.08□□□□□ -1.6
PCDH1Q08174 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC5.08□□□□□ -1.6
PCDH1Q08174 AC012119.1-201ENST00000603184 222 ntBASIC5.08□□□□□ -1.6
PCDH1Q08174 SNORD58B-201ENST00000607313 66 ntBASIC5.08□□□□□ -1.6
PCDH1Q08174 AC020634.1-201ENST00000608701 549 ntBASIC5.08□□□□□ -1.6
PCDH1Q08174 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
PCDH1Q08174 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
PCDH1Q08174 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PCDH1Q08174 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PCDH1Q08174 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PCDH1Q08174 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
PCDH1Q08174 ADAM5-202ENST00000399789 1942 ntBASIC5.07□□□□□ -1.6
PCDH1Q08174 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
PCDH1Q08174 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.07□□□□□ -1.6
PCDH1Q08174 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
PCDH1Q08174 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
PCDH1Q08174 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.07□□□□□ -1.6
PCDH1Q08174 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
PCDH1Q08174 U3.3-201ENST00000362986 216 ntBASIC5.07□□□□□ -1.6
PCDH1Q08174 Y_RNA.152-201ENST00000363578 100 ntBASIC5.07□□□□□ -1.6
PCDH1Q08174 Y_RNA.380-201ENST00000365663 111 ntBASIC5.07□□□□□ -1.6
PCDH1Q08174 Y_RNA.424-201ENST00000384063 103 ntBASIC5.07□□□□□ -1.6
PCDH1Q08174 RNU6-842P-201ENST00000384269 107 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms