Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HMGCS1Q01581 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
HMGCS1Q01581 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
HMGCS1Q01581 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.66□□□□□ -1.98
HMGCS1Q01581 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
HMGCS1Q01581 Y_RNA.25-201ENST00000362528 102 ntBASIC2.66□□□□□ -1.98
HMGCS1Q01581 U8.9-201ENST00000365667 134 ntBASIC2.66□□□□□ -1.98
HMGCS1Q01581 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
HMGCS1Q01581 CD24P4-201ENST00000382840 243 ntBASIC2.66□□□□□ -1.98
HMGCS1Q01581 RNU6-925P-201ENST00000384629 104 ntBASIC2.66□□□□□ -1.98
HMGCS1Q01581 AL512633.1-201ENST00000399931 655 ntBASIC2.66□□□□□ -1.98
HMGCS1Q01581 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.66□□□□□ -1.98
HMGCS1Q01581 SSXP9-201ENST00000417503 292 ntBASIC2.66□□□□□ -1.98
HMGCS1Q01581 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.66□□□□□ -1.98
HMGCS1Q01581 MRPS36P1-201ENST00000421291 307 ntBASIC2.66□□□□□ -1.98
HMGCS1Q01581 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.66□□□□□ -1.98
HMGCS1Q01581 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.66□□□□□ -1.98
HMGCS1Q01581 AL139132.1-201ENST00000431587 344 ntBASIC2.66□□□□□ -1.98
HMGCS1Q01581 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.66□□□□□ -1.98
HMGCS1Q01581 OR10R1P-201ENST00000441524 1141 ntBASIC2.66□□□□□ -1.98
HMGCS1Q01581 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.66□□□□□ -1.98
HMGCS1Q01581 RFC5P1-201ENST00000454419 874 ntBASIC2.66□□□□□ -1.98
HMGCS1Q01581 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC2.66□□□□□ -1.98
HMGCS1Q01581 RNA5SP310-201ENST00000459084 116 ntBASIC2.66□□□□□ -1.98
HMGCS1Q01581 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.66□□□□□ -1.98
HMGCS1Q01581 RPL23AP11-201ENST00000475260 469 ntBASIC2.66□□□□□ -1.98
HMGCS1Q01581 AC108734.3-201ENST00000481241 1165 ntBASIC2.66□□□□□ -1.98
HMGCS1Q01581 RN7SL297P-201ENST00000483161 293 ntBASIC2.66□□□□□ -1.98
HMGCS1Q01581 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.66□□□□□ -1.98
HMGCS1Q01581 AC080014.1-201ENST00000496877 1201 ntBASIC2.66□□□□□ -1.98
HMGCS1Q01581 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.66□□□□□ -1.98
HMGCS1Q01581 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.66□□□□□ -1.98
HMGCS1Q01581 AC113347.3-201ENST00000509113 148 ntBASIC2.66□□□□□ -1.98
HMGCS1Q01581 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.66□□□□□ -1.98
HMGCS1Q01581 RNU6-27P-201ENST00000516146 107 ntBASIC2.66□□□□□ -1.98
HMGCS1Q01581 RNU6-1225P-201ENST00000516336 65 ntBASIC2.66□□□□□ -1.98
HMGCS1Q01581 AC126177.3-201ENST00000551839 688 ntBASIC2.66□□□□□ -1.98
HMGCS1Q01581 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.66□□□□□ -1.98
HMGCS1Q01581 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HMGCS1Q01581 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.66□□□□□ -1.98
HMGCS1Q01581 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
HMGCS1Q01581 AC023043.3-201ENST00000593113 385 ntBASIC2.66□□□□□ -1.98
HMGCS1Q01581 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.66□□□□□ -1.98
HMGCS1Q01581 AC078899.3-201ENST00000599065 212 ntBASIC2.66□□□□□ -1.98
HMGCS1Q01581 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.66□□□□□ -1.98
HMGCS1Q01581 DUXAP4-201ENST00000603046 613 ntBASIC2.66□□□□□ -1.98
HMGCS1Q01581 AC024153.1-201ENST00000603103 365 ntBASIC2.66□□□□□ -1.98
HMGCS1Q01581 AC012669.1-201ENST00000603209 283 ntBASIC2.66□□□□□ -1.98
HMGCS1Q01581 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.66□□□□□ -1.98
HMGCS1Q01581 OR1S1-201ENST00000624470 978 ntBASIC2.66□□□□□ -1.98
HMGCS1Q01581 AC120349.2-201ENST00000625002 298 ntBASIC2.66□□□□□ -1.98
HMGCS1Q01581 AC091925.2-201ENST00000625059 256 ntBASIC2.66□□□□□ -1.98
HMGCS1Q01581 U6.101-201ENST00000637707 76 ntBASIC2.66□□□□□ -1.98
HMGCS1Q01581 LINC02211-204ENST00000642024 1070 ntBASIC2.66□□□□□ -1.98
HMGCS1Q01581 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HMGCS1Q01581 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.66□□□□□ -1.98
HMGCS1Q01581 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
HMGCS1Q01581 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.66□□□□□ -1.98
HMGCS1Q01581 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.66□□□□□ -1.98
HMGCS1Q01581 AC107982.1-201ENST00000507171 1300 ntBASIC2.66□□□□□ -1.98
HMGCS1Q01581 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.65□□□□□ -1.98
HMGCS1Q01581 AC009487.2-201ENST00000420969 6821 ntBASIC2.65□□□□□ -1.98
HMGCS1Q01581 AL355596.1-201ENST00000565399 3996 ntBASIC2.65□□□□□ -1.98
HMGCS1Q01581 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
HMGCS1Q01581 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
HMGCS1Q01581 SNRPEP3-201ENST00000338402 276 ntBASIC2.65□□□□□ -1.99
HMGCS1Q01581 MIR26A1-201ENST00000362205 77 ntBASIC2.65□□□□□ -1.99
HMGCS1Q01581 SNORA18.3-201ENST00000384122 132 ntBASIC2.65□□□□□ -1.99
HMGCS1Q01581 VN1R51P-201ENST00000411675 945 ntBASIC2.65□□□□□ -1.99
HMGCS1Q01581 AL592148.1-201ENST00000413568 445 ntBASIC2.65□□□□□ -1.99
HMGCS1Q01581 RPL7P10-201ENST00000417407 739 ntBASIC2.65□□□□□ -1.99
HMGCS1Q01581 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.65□□□□□ -1.99
HMGCS1Q01581 AC079780.1-201ENST00000428259 207 ntBASIC2.65□□□□□ -1.99
HMGCS1Q01581 YWHAZP7-201ENST00000436906 631 ntBASIC2.65□□□□□ -1.99
HMGCS1Q01581 MUPP-201ENST00000438111 566 ntBASIC2.65□□□□□ -1.99
HMGCS1Q01581 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.65□□□□□ -1.99
HMGCS1Q01581 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.65□□□□□ -1.99
HMGCS1Q01581 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.65□□□□□ -1.99
HMGCS1Q01581 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.65□□□□□ -1.99
HMGCS1Q01581 RPL9P33-201ENST00000484311 566 ntBASIC2.65□□□□□ -1.99
HMGCS1Q01581 KLRA1P-201ENST00000503499 986 ntBASIC2.65□□□□□ -1.99
HMGCS1Q01581 DSTNP2-201ENST00000504533 515 ntBASIC2.65□□□□□ -1.99
HMGCS1Q01581 ARL4AP2-201ENST00000507378 601 ntBASIC2.65□□□□□ -1.99
HMGCS1Q01581 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.65□□□□□ -1.99
HMGCS1Q01581 AC008837.2-201ENST00000513076 418 ntBASIC2.65□□□□□ -1.99
HMGCS1Q01581 OR10V3P-201ENST00000525712 725 ntBASIC2.65□□□□□ -1.99
HMGCS1Q01581 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
HMGCS1Q01581 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.65□□□□□ -1.99
HMGCS1Q01581 AC125611.1-201ENST00000549563 229 ntBASIC2.65□□□□□ -1.99
HMGCS1Q01581 SETP2-201ENST00000553886 926 ntBASIC2.65□□□□□ -1.99
HMGCS1Q01581 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.65□□□□□ -1.99
HMGCS1Q01581 MTCYBP23-201ENST00000558717 1102 ntBASIC2.65□□□□□ -1.99
HMGCS1Q01581 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.65□□□□□ -1.99
HMGCS1Q01581 AL160237.3-201ENST00000604114 1013 ntBASIC2.65□□□□□ -1.99
HMGCS1Q01581 AC009570.1-201ENST00000609599 745 ntBASIC2.65□□□□□ -1.99
HMGCS1Q01581 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.65□□□□□ -1.99
HMGCS1Q01581 AP003122.6-201ENST00000623831 495 ntBASIC2.65□□□□□ -1.99
HMGCS1Q01581 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.65□□□□□ -1.99
HMGCS1Q01581 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.65□□□□□ -1.99
HMGCS1Q01581 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms