Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 MTND1P35-201ENST00000526739 508 ntBASIC4.4□□□□□ -1.71
CDC42EP1Q00587 AC118273.2-201ENST00000532092 465 ntBASIC4.4□□□□□ -1.71
CDC42EP1Q00587 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.4□□□□□ -1.71
CDC42EP1Q00587 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.4□□□□□ -1.71
CDC42EP1Q00587 Z84480.1-201ENST00000605131 311 ntBASIC4.4□□□□□ -1.71
CDC42EP1Q00587 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CDC42EP1Q00587 AC002553.4-201ENST00000616896 331 ntBASIC4.4□□□□□ -1.71
CDC42EP1Q00587 MIR7154-201ENST00000620673 73 ntBASIC4.4□□□□□ -1.71
CDC42EP1Q00587 AL161637.1-201ENST00000622380 412 ntBASIC4.4□□□□□ -1.71
CDC42EP1Q00587 AC009161.2-201ENST00000624626 138 ntBASIC4.4□□□□□ -1.71
CDC42EP1Q00587 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC4.4□□□□□ -1.71
CDC42EP1Q00587 MIR1321-201ENST00000637766 79 ntBASIC4.4□□□□□ -1.71
CDC42EP1Q00587 AC099654.14-201ENST00000638599 341 ntBASIC4.4□□□□□ -1.71
CDC42EP1Q00587 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.4□□□□□ -1.71
CDC42EP1Q00587 FAM91A3P-201ENST00000456826 2544 ntBASIC4.4□□□□□ -1.71
CDC42EP1Q00587 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
CDC42EP1Q00587 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CDC42EP1Q00587 AC138915.3-201ENST00000562908 1389 ntBASIC4.4□□□□□ -1.71
CDC42EP1Q00587 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CDC42EP1Q00587 AC090229.1-201ENST00000590983 1609 ntBASIC4.39□□□□□ -1.71
CDC42EP1Q00587 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
CDC42EP1Q00587 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.39□□□□□ -1.71
CDC42EP1Q00587 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CDC42EP1Q00587 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.39□□□□□ -1.71
CDC42EP1Q00587 Y_RNA.295-201ENST00000364918 102 ntBASIC4.39□□□□□ -1.71
CDC42EP1Q00587 RNU5E-4P-201ENST00000364931 120 ntBASIC4.39□□□□□ -1.71
CDC42EP1Q00587 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
CDC42EP1Q00587 Y_RNA.481-201ENST00000384373 102 ntBASIC4.39□□□□□ -1.71
CDC42EP1Q00587 MIR554-201ENST00000384874 96 ntBASIC4.39□□□□□ -1.71
CDC42EP1Q00587 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CDC42EP1Q00587 RNU6-278P-201ENST00000390945 109 ntBASIC4.39□□□□□ -1.71
CDC42EP1Q00587 AL603766.1-201ENST00000407763 664 ntBASIC4.39□□□□□ -1.71
CDC42EP1Q00587 RNU6ATAC-201ENST00000408749 126 ntBASIC4.39□□□□□ -1.71
CDC42EP1Q00587 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.39□□□□□ -1.71
CDC42EP1Q00587 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.39□□□□□ -1.71
CDC42EP1Q00587 OR1AA1P-201ENST00000419597 916 ntBASIC4.39□□□□□ -1.71
CDC42EP1Q00587 NEK4P1-201ENST00000433383 879 ntBASIC4.39□□□□□ -1.71
CDC42EP1Q00587 AC010655.1-201ENST00000449336 292 ntBASIC4.39□□□□□ -1.71
CDC42EP1Q00587 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.39□□□□□ -1.71
CDC42EP1Q00587 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.39□□□□□ -1.71
CDC42EP1Q00587 RNU7-59P-201ENST00000459101 61 ntBASIC4.39□□□□□ -1.71
CDC42EP1Q00587 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.39□□□□□ -1.71
CDC42EP1Q00587 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CDC42EP1Q00587 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CDC42EP1Q00587 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.39□□□□□ -1.71
CDC42EP1Q00587 STMN1P2-201ENST00000508435 439 ntBASIC4.39□□□□□ -1.71
CDC42EP1Q00587 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.39□□□□□ -1.71
CDC42EP1Q00587 AP000857.1-201ENST00000532151 543 ntBASIC4.39□□□□□ -1.71
CDC42EP1Q00587 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.39□□□□□ -1.71
CDC42EP1Q00587 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.39□□□□□ -1.71
CDC42EP1Q00587 AP005205.1-201ENST00000563503 508 ntBASIC4.39□□□□□ -1.71
CDC42EP1Q00587 AC022968.1-201ENST00000567372 442 ntBASIC4.39□□□□□ -1.71
CDC42EP1Q00587 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.39□□□□□ -1.71
CDC42EP1Q00587 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.39□□□□□ -1.71
CDC42EP1Q00587 AL158211.4-201ENST00000606988 584 ntBASIC4.39□□□□□ -1.71
CDC42EP1Q00587 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.39□□□□□ -1.71
CDC42EP1Q00587 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.39□□□□□ -1.71
CDC42EP1Q00587 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CDC42EP1Q00587 DDX18P3-201ENST00000404856 2007 ntBASIC4.39□□□□□ -1.71
CDC42EP1Q00587 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CDC42EP1Q00587 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CDC42EP1Q00587 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
CDC42EP1Q00587 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
CDC42EP1Q00587 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CDC42EP1Q00587 CR848007.1-201ENST00000442354 1699 ntBASIC4.38□□□□□ -1.71
CDC42EP1Q00587 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CDC42EP1Q00587 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CDC42EP1Q00587 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CDC42EP1Q00587 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CDC42EP1Q00587 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.38□□□□□ -1.71
CDC42EP1Q00587 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
CDC42EP1Q00587 RNU1-108P-201ENST00000362556 161 ntBASIC4.38□□□□□ -1.71
CDC42EP1Q00587 Y_RNA.89-201ENST00000363031 102 ntBASIC4.38□□□□□ -1.71
CDC42EP1Q00587 RNU6-108P-201ENST00000365558 107 ntBASIC4.38□□□□□ -1.71
CDC42EP1Q00587 RNU1-39P-201ENST00000383897 165 ntBASIC4.38□□□□□ -1.71
CDC42EP1Q00587 SNORA48.7-201ENST00000391302 135 ntBASIC4.38□□□□□ -1.71
CDC42EP1Q00587 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.38□□□□□ -1.71
CDC42EP1Q00587 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.38□□□□□ -1.71
CDC42EP1Q00587 RPL7AP73-201ENST00000413490 353 ntBASIC4.38□□□□□ -1.71
CDC42EP1Q00587 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.38□□□□□ -1.71
CDC42EP1Q00587 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC4.38□□□□□ -1.71
CDC42EP1Q00587 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.38□□□□□ -1.71
CDC42EP1Q00587 RPL23AP30-201ENST00000432419 501 ntBASIC4.38□□□□□ -1.71
CDC42EP1Q00587 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.38□□□□□ -1.71
CDC42EP1Q00587 RPL7P54-201ENST00000438336 674 ntBASIC4.38□□□□□ -1.71
CDC42EP1Q00587 HMGB3P12-201ENST00000438745 556 ntBASIC4.38□□□□□ -1.71
CDC42EP1Q00587 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.38□□□□□ -1.71
CDC42EP1Q00587 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.38□□□□□ -1.71
CDC42EP1Q00587 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.38□□□□□ -1.71
CDC42EP1Q00587 DPPA3P1-201ENST00000448050 469 ntBASIC4.38□□□□□ -1.71
CDC42EP1Q00587 PPIAP3-201ENST00000450588 505 ntBASIC4.38□□□□□ -1.71
CDC42EP1Q00587 RPS11P1-201ENST00000451072 473 ntBASIC4.38□□□□□ -1.71
CDC42EP1Q00587 NANOGP10-201ENST00000453325 895 ntBASIC4.38□□□□□ -1.71
CDC42EP1Q00587 AC234775.1-201ENST00000454247 670 ntBASIC4.38□□□□□ -1.71
CDC42EP1Q00587 snoU13.3-201ENST00000459441 104 ntBASIC4.38□□□□□ -1.71
CDC42EP1Q00587 AC069439.1-201ENST00000494739 167 ntBASIC4.38□□□□□ -1.71
CDC42EP1Q00587 RNU6-1281P-201ENST00000516223 105 ntBASIC4.38□□□□□ -1.71
CDC42EP1Q00587 RNA5SP179-201ENST00000517284 121 ntBASIC4.38□□□□□ -1.71
CDC42EP1Q00587 AC090572.1-201ENST00000519251 160 ntBASIC4.38□□□□□ -1.71
CDC42EP1Q00587 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms