Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 ARPC3P1-201ENST00000437218 533 ntBASIC2.13□□□□□ -2.07
H3F3AP84243 AC069306.1-201ENST00000507006 843 ntBASIC2.13□□□□□ -2.07
H3F3AP84243 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC2.13□□□□□ -2.07
H3F3AP84243 AC026436.1-201ENST00000510537 270 ntBASIC2.13□□□□□ -2.07
H3F3AP84243 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.13□□□□□ -2.07
H3F3AP84243 RNU1-104P-201ENST00000517280 175 ntBASIC2.13□□□□□ -2.07
H3F3AP84243 AP003467.2-201ENST00000520175 319 ntBASIC2.13□□□□□ -2.07
H3F3AP84243 AC103783.1-201ENST00000520506 373 ntBASIC2.13□□□□□ -2.07
H3F3AP84243 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.13□□□□□ -2.07
H3F3AP84243 HIGD1AP6-201ENST00000521833 279 ntBASIC2.13□□□□□ -2.07
H3F3AP84243 AP001646.1-201ENST00000527936 915 ntBASIC2.13□□□□□ -2.07
H3F3AP84243 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.13□□□□□ -2.07
H3F3AP84243 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.13□□□□□ -2.07
H3F3AP84243 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.13□□□□□ -2.07
H3F3AP84243 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.13□□□□□ -2.07
H3F3AP84243 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.13□□□□□ -2.07
H3F3AP84243 AC106734.1-201ENST00000568646 663 ntBASIC2.13□□□□□ -2.07
H3F3AP84243 MYL12BP1-201ENST00000569826 507 ntBASIC2.13□□□□□ -2.07
H3F3AP84243 AC074051.3-201ENST00000570238 358 ntBASIC2.13□□□□□ -2.07
H3F3AP84243 AC011260.1-201ENST00000578420 472 ntBASIC2.13□□□□□ -2.07
H3F3AP84243 AP002826.1-201ENST00000608835 315 ntBASIC2.13□□□□□ -2.07
H3F3AP84243 AL137847.3-201ENST00000611521 109 ntBASIC2.13□□□□□ -2.07
H3F3AP84243 AC025034.2-201ENST00000623264 286 ntBASIC2.13□□□□□ -2.07
H3F3AP84243 AC008669.1-201ENST00000565823 2178 ntBASIC2.13□□□□□ -2.07
H3F3AP84243 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.13□□□□□ -2.07
H3F3AP84243 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.13□□□□□ -2.07
H3F3AP84243 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.12□□□□□ -2.07
H3F3AP84243 SNORA67.1-201ENST00000364749 141 ntBASIC2.12□□□□□ -2.07
H3F3AP84243 U3.29-201ENST00000391296 212 ntBASIC2.12□□□□□ -2.07
H3F3AP84243 USP9YP27-201ENST00000418455 438 ntBASIC2.12□□□□□ -2.07
H3F3AP84243 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.12□□□□□ -2.07
H3F3AP84243 MTCO1P57-201ENST00000432182 261 ntBASIC2.12□□□□□ -2.07
H3F3AP84243 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.12□□□□□ -2.07
H3F3AP84243 AC004866.2-201ENST00000438285 481 ntBASIC2.12□□□□□ -2.07
H3F3AP84243 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.12□□□□□ -2.07
H3F3AP84243 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC2.12□□□□□ -2.07
H3F3AP84243 VPS26AP1-201ENST00000483197 979 ntBASIC2.12□□□□□ -2.07
H3F3AP84243 OR9N1P-202ENST00000494289 481 ntBASIC2.12□□□□□ -2.07
H3F3AP84243 RN7SL636P-201ENST00000497504 294 ntBASIC2.12□□□□□ -2.07
H3F3AP84243 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.12□□□□□ -2.07
H3F3AP84243 AC234781.5-201ENST00000508429 271 ntBASIC2.12□□□□□ -2.07
H3F3AP84243 HMGB3P3-201ENST00000510526 400 ntBASIC2.12□□□□□ -2.07
H3F3AP84243 AC113155.1-201ENST00000511141 769 ntBASIC2.12□□□□□ -2.07
H3F3AP84243 AP003122.3-201ENST00000526316 255 ntBASIC2.12□□□□□ -2.07
H3F3AP84243 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
H3F3AP84243 ACTR3BP3-201ENST00000565577 979 ntBASIC2.12□□□□□ -2.07
H3F3AP84243 MIR5007-201ENST00000583098 95 ntBASIC2.12□□□□□ -2.07
H3F3AP84243 MIR4658-201ENST00000584344 65 ntBASIC2.12□□□□□ -2.07
H3F3AP84243 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.12□□□□□ -2.07
H3F3AP84243 AL645944.1-201ENST00000603857 493 ntBASIC2.12□□□□□ -2.07
H3F3AP84243 AC046143.2-201ENST00000609789 160 ntBASIC2.12□□□□□ -2.07
H3F3AP84243 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.12□□□□□ -2.07
H3F3AP84243 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.12□□□□□ -2.07
H3F3AP84243 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.12□□□□□ -2.07
H3F3AP84243 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
H3F3AP84243 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.07
H3F3AP84243 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
H3F3AP84243 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
H3F3AP84243 AC130650.2-201ENST00000618736 2403 ntBASIC2.11□□□□□ -2.07
H3F3AP84243 PABPC1P9-201ENST00000426076 1612 ntBASIC2.11□□□□□ -2.07
H3F3AP84243 SNORD82-201ENST00000365530 70 ntBASIC2.11□□□□□ -2.07
H3F3AP84243 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.11□□□□□ -2.07
H3F3AP84243 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.11□□□□□ -2.07
H3F3AP84243 AL136372.1-201ENST00000403060 228 ntBASIC2.11□□□□□ -2.07
H3F3AP84243 AF274854.1-201ENST00000413236 615 ntBASIC2.11□□□□□ -2.07
H3F3AP84243 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.11□□□□□ -2.07
H3F3AP84243 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.11□□□□□ -2.07
H3F3AP84243 AC236972.1-201ENST00000433225 199 ntBASIC2.11□□□□□ -2.07
H3F3AP84243 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.11□□□□□ -2.07
H3F3AP84243 MTND4LP10-201ENST00000435146 291 ntBASIC2.11□□□□□ -2.07
H3F3AP84243 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.11□□□□□ -2.07
H3F3AP84243 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.11□□□□□ -2.07
H3F3AP84243 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.11□□□□□ -2.07
H3F3AP84243 snoU13.28-201ENST00000459235 104 ntBASIC2.11□□□□□ -2.07
H3F3AP84243 RPL31P41-201ENST00000477967 372 ntBASIC2.11□□□□□ -2.07
H3F3AP84243 AC090096.1-201ENST00000489168 390 ntBASIC2.11□□□□□ -2.07
H3F3AP84243 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.11□□□□□ -2.07
H3F3AP84243 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.11□□□□□ -2.07
H3F3AP84243 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.11□□□□□ -2.07
H3F3AP84243 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.11□□□□□ -2.07
H3F3AP84243 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.11□□□□□ -2.07
H3F3AP84243 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.11□□□□□ -2.07
H3F3AP84243 RNA5SP24-201ENST00000516478 95 ntBASIC2.11□□□□□ -2.07
H3F3AP84243 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.11□□□□□ -2.07
H3F3AP84243 CASP1P1-201ENST00000526345 212 ntBASIC2.11□□□□□ -2.07
H3F3AP84243 AC087241.2-201ENST00000535801 324 ntBASIC2.11□□□□□ -2.07
H3F3AP84243 AC004217.3-201ENST00000551552 878 ntBASIC2.11□□□□□ -2.07
H3F3AP84243 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.11□□□□□ -2.07
H3F3AP84243 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.11□□□□□ -2.07
H3F3AP84243 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.11□□□□□ -2.07
H3F3AP84243 AC012443.1-201ENST00000605605 231 ntBASIC2.11□□□□□ -2.07
H3F3AP84243 AC021851.1-201ENST00000608537 1082 ntBASIC2.11□□□□□ -2.07
H3F3AP84243 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC2.11□□□□□ -2.07
H3F3AP84243 AC025588.4-201ENST00000615802 908 ntBASIC2.11□□□□□ -2.07
H3F3AP84243 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.11□□□□□ -2.07
H3F3AP84243 MFSD8-245ENST00000641743 948 ntBASIC2.11□□□□□ -2.07
H3F3AP84243 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
H3F3AP84243 SEC63P2-201ENST00000503863 1939 ntBASIC2.11□□□□□ -2.07
H3F3AP84243 ZNF90P1-201ENST00000480493 1951 ntBASIC2.1□□□□□ -2.07
H3F3AP84243 RNU1-105P-201ENST00000363470 161 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms