Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 XGY1-201ENST00000381172 446 ntBASIC3.07□□□□□ -1.92
CCNA1P78396 SNORA67.4-201ENST00000384688 142 ntBASIC3.07□□□□□ -1.92
CCNA1P78396 RNU6-932P-201ENST00000391108 106 ntBASIC3.07□□□□□ -1.92
CCNA1P78396 RPL21P3-201ENST00000395517 478 ntBASIC3.07□□□□□ -1.92
CCNA1P78396 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CCNA1P78396 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.07□□□□□ -1.92
CCNA1P78396 AC109583.1-201ENST00000432156 268 ntBASIC3.07□□□□□ -1.92
CCNA1P78396 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.07□□□□□ -1.92
CCNA1P78396 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.07□□□□□ -1.92
CCNA1P78396 Z82190.1-201ENST00000454534 490 ntBASIC3.07□□□□□ -1.92
CCNA1P78396 AC146507.2-201ENST00000460608 476 ntBASIC3.07□□□□□ -1.92
CCNA1P78396 AC104164.3-201ENST00000467363 1258 ntBASIC3.07□□□□□ -1.92
CCNA1P78396 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.07□□□□□ -1.92
CCNA1P78396 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.07□□□□□ -1.92
CCNA1P78396 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.07□□□□□ -1.92
CCNA1P78396 RNA5SP282-201ENST00000516355 108 ntBASIC3.07□□□□□ -1.92
CCNA1P78396 RNA5SP24-201ENST00000516478 95 ntBASIC3.07□□□□□ -1.92
CCNA1P78396 DEFB108D-201ENST00000527787 222 ntBASIC3.07□□□□□ -1.92
CCNA1P78396 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.07□□□□□ -1.92
CCNA1P78396 MTCYBP27-201ENST00000555160 670 ntBASIC3.07□□□□□ -1.92
CCNA1P78396 HMGB1P14-201ENST00000557424 591 ntBASIC3.07□□□□□ -1.92
CCNA1P78396 SNORD53-201ENST00000579969 78 ntBASIC3.07□□□□□ -1.92
CCNA1P78396 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.07□□□□□ -1.92
CCNA1P78396 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.07□□□□□ -1.92
CCNA1P78396 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.07□□□□□ -1.92
CCNA1P78396 AC107308.1-201ENST00000615897 301 ntBASIC3.07□□□□□ -1.92
CCNA1P78396 AC025034.2-201ENST00000623264 286 ntBASIC3.07□□□□□ -1.92
CCNA1P78396 AC027309.3-201ENST00000623419 351 ntBASIC3.07□□□□□ -1.92
CCNA1P78396 CTSLP2-204ENST00000629029 392 ntBASIC3.07□□□□□ -1.92
CCNA1P78396 MTCO1P23-201ENST00000415223 1526 ntBASIC3.07□□□□□ -1.92
CCNA1P78396 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
CCNA1P78396 U8.9-201ENST00000365667 134 ntBASIC3.06□□□□□ -1.92
CCNA1P78396 RNU6-882P-201ENST00000391025 103 ntBASIC3.06□□□□□ -1.92
CCNA1P78396 AL356057.3-201ENST00000402607 340 ntBASIC3.06□□□□□ -1.92
CCNA1P78396 RNA5SP492-201ENST00000411330 114 ntBASIC3.06□□□□□ -1.92
CCNA1P78396 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.06□□□□□ -1.92
CCNA1P78396 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.06□□□□□ -1.92
CCNA1P78396 SDCBPP3-201ENST00000419629 891 ntBASIC3.06□□□□□ -1.92
CCNA1P78396 AC112220.1-201ENST00000434628 355 ntBASIC3.06□□□□□ -1.92
CCNA1P78396 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.06□□□□□ -1.92
CCNA1P78396 OR51B8P-201ENST00000449892 769 ntBASIC3.06□□□□□ -1.92
CCNA1P78396 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.06□□□□□ -1.92
CCNA1P78396 SNRPGP6-201ENST00000451124 220 ntBASIC3.06□□□□□ -1.92
CCNA1P78396 RN7SL75P-201ENST00000461926 281 ntBASIC3.06□□□□□ -1.92
CCNA1P78396 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CCNA1P78396 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.06□□□□□ -1.92
CCNA1P78396 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.06□□□□□ -1.92
CCNA1P78396 AC087272.1-201ENST00000523624 533 ntBASIC3.06□□□□□ -1.92
CCNA1P78396 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CCNA1P78396 MIR3605-201ENST00000583214 100 ntBASIC3.06□□□□□ -1.92
CCNA1P78396 MIR4506-201ENST00000584693 77 ntBASIC3.06□□□□□ -1.92
CCNA1P78396 AC091057.2-201ENST00000602594 792 ntBASIC3.06□□□□□ -1.92
CCNA1P78396 AC068880.5-201ENST00000624331 290 ntBASIC3.06□□□□□ -1.92
CCNA1P78396 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.06□□□□□ -1.92
CCNA1P78396 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
CCNA1P78396 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
CCNA1P78396 AC008669.1-201ENST00000565823 2178 ntBASIC3.05□□□□□ -1.92
CCNA1P78396 AC093831.2-201ENST00000624393 3427 ntBASIC3.05□□□□□ -1.92
CCNA1P78396 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.05□□□□□ -1.92
CCNA1P78396 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
CCNA1P78396 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
CCNA1P78396 SNORD21-201ENST00000383953 95 ntBASIC3.05□□□□□ -1.92
CCNA1P78396 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
CCNA1P78396 SNORA26.7-201ENST00000391288 122 ntBASIC3.05□□□□□ -1.92
CCNA1P78396 RPL21P75-201ENST00000396599 483 ntBASIC3.05□□□□□ -1.92
CCNA1P78396 RPL21P28-201ENST00000401418 483 ntBASIC3.05□□□□□ -1.92
CCNA1P78396 AL592114.1-201ENST00000403842 483 ntBASIC3.05□□□□□ -1.92
CCNA1P78396 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.05□□□□□ -1.92
CCNA1P78396 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.05□□□□□ -1.92
CCNA1P78396 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.05□□□□□ -1.92
CCNA1P78396 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.05□□□□□ -1.92
CCNA1P78396 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.05□□□□□ -1.92
CCNA1P78396 UBBP3-201ENST00000445497 241 ntBASIC3.05□□□□□ -1.92
CCNA1P78396 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.05□□□□□ -1.92
CCNA1P78396 RPL21P39-201ENST00000463605 483 ntBASIC3.05□□□□□ -1.92
CCNA1P78396 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC3.05□□□□□ -1.92
CCNA1P78396 AC003982.1-202ENST00000469928 248 ntBASIC3.05□□□□□ -1.92
CCNA1P78396 AC011979.1-201ENST00000472300 483 ntBASIC3.05□□□□□ -1.92
CCNA1P78396 RPL21P93-201ENST00000480465 489 ntBASIC3.05□□□□□ -1.92
CCNA1P78396 AC233702.1-201ENST00000482905 502 ntBASIC3.05□□□□□ -1.92
CCNA1P78396 AC087190.1-201ENST00000484462 480 ntBASIC3.05□□□□□ -1.92
CCNA1P78396 AC093591.1-201ENST00000491435 481 ntBASIC3.05□□□□□ -1.92
CCNA1P78396 RPL21P16-201ENST00000495531 483 ntBASIC3.05□□□□□ -1.92
CCNA1P78396 BOLA3P3-201ENST00000505182 232 ntBASIC3.05□□□□□ -1.92
CCNA1P78396 RAC1P5-201ENST00000512182 576 ntBASIC3.05□□□□□ -1.92
CCNA1P78396 RNU6-885P-201ENST00000516607 104 ntBASIC3.05□□□□□ -1.92
CCNA1P78396 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.05□□□□□ -1.92
CCNA1P78396 RPL7P20-201ENST00000520308 745 ntBASIC3.05□□□□□ -1.92
CCNA1P78396 UBTFL10-201ENST00000528532 562 ntBASIC3.05□□□□□ -1.92
CCNA1P78396 AP001317.1-201ENST00000531194 960 ntBASIC3.05□□□□□ -1.92
CCNA1P78396 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.05□□□□□ -1.92
CCNA1P78396 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.05□□□□□ -1.92
CCNA1P78396 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.05□□□□□ -1.92
CCNA1P78396 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.05□□□□□ -1.92
CCNA1P78396 AC013444.2-201ENST00000603317 787 ntBASIC3.05□□□□□ -1.92
CCNA1P78396 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.05□□□□□ -1.92
CCNA1P78396 AC004696.1-201ENST00000614345 607 ntBASIC3.05□□□□□ -1.92
CCNA1P78396 AL161629.2-201ENST00000615347 275 ntBASIC3.05□□□□□ -1.92
CCNA1P78396 AL355493.4-201ENST00000618530 292 ntBASIC3.05□□□□□ -1.92
CCNA1P78396 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms