Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 RNF19BPX-201ENST00000426224 625 ntBASIC1.74□□□□□ -2.13
LSM3P62310 NDUFB4P6-201ENST00000436819 366 ntBASIC1.74□□□□□ -2.13
LSM3P62310 RAB11AP1-201ENST00000442978 646 ntBASIC1.74□□□□□ -2.13
LSM3P62310 AL358232.1-201ENST00000448030 501 ntBASIC1.74□□□□□ -2.13
LSM3P62310 AL034418.1-201ENST00000448675 860 ntBASIC1.74□□□□□ -2.13
LSM3P62310 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC1.74□□□□□ -2.13
LSM3P62310 MTAPP1-201ENST00000489154 819 ntBASIC1.74□□□□□ -2.13
LSM3P62310 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.74□□□□□ -2.13
LSM3P62310 MRPS36P2-201ENST00000512569 299 ntBASIC1.74□□□□□ -2.13
LSM3P62310 SNORA70.16-201ENST00000516390 95 ntBASIC1.74□□□□□ -2.13
LSM3P62310 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.74□□□□□ -2.13
LSM3P62310 MIR3122-201ENST00000577243 73 ntBASIC1.74□□□□□ -2.13
LSM3P62310 MIR4319-201ENST00000577285 85 ntBASIC1.74□□□□□ -2.13
LSM3P62310 AC090897.2-201ENST00000581715 130 ntBASIC1.74□□□□□ -2.13
LSM3P62310 AC022069.1-201ENST00000582910 658 ntBASIC1.74□□□□□ -2.13
LSM3P62310 KATNBL1P1-201ENST00000605192 748 ntBASIC1.74□□□□□ -2.13
LSM3P62310 AC245884.12-201ENST00000615364 59 ntBASIC1.74□□□□□ -2.13
LSM3P62310 AC010378.1-201ENST00000619270 362 ntBASIC1.74□□□□□ -2.13
LSM3P62310 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.74□□□□□ -2.13
LSM3P62310 ZNF658B-202ENST00000615961 3375 ntBASIC1.74□□□□□ -2.13
LSM3P62310 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
LSM3P62310 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
LSM3P62310 AC111188.2-201ENST00000529697 1387 ntBASIC1.73□□□□□ -2.13
LSM3P62310 AL513185.3-201ENST00000433335 1300 ntBASIC1.73□□□□□ -2.13
LSM3P62310 SNORA3A-201ENST00000364113 130 ntBASIC1.73□□□□□ -2.13
LSM3P62310 SNORA16B-201ENST00000364674 135 ntBASIC1.73□□□□□ -2.13
LSM3P62310 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC1.73□□□□□ -2.13
LSM3P62310 XGY1-201ENST00000381172 446 ntBASIC1.73□□□□□ -2.13
LSM3P62310 AP002784.2-201ENST00000397300 549 ntBASIC1.73□□□□□ -2.13
LSM3P62310 RNU6-193P-201ENST00000410977 107 ntBASIC1.73□□□□□ -2.13
LSM3P62310 LINC01347-201ENST00000417964 355 ntBASIC1.73□□□□□ -2.13
LSM3P62310 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC1.73□□□□□ -2.13
LSM3P62310 AC092573.2-201ENST00000434546 243 ntBASIC1.73□□□□□ -2.13
LSM3P62310 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC1.73□□□□□ -2.13
LSM3P62310 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.73□□□□□ -2.13
LSM3P62310 AC108938.1-201ENST00000451204 136 ntBASIC1.73□□□□□ -2.13
LSM3P62310 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.73□□□□□ -2.13
LSM3P62310 COL6A4P2-205ENST00000509855 506 ntBASIC1.73□□□□□ -2.13
LSM3P62310 NDUFS5P6-201ENST00000529136 295 ntBASIC1.73□□□□□ -2.13
LSM3P62310 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.73□□□□□ -2.13
LSM3P62310 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC1.73□□□□□ -2.13
LSM3P62310 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.73□□□□□ -2.13
LSM3P62310 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.73□□□□□ -2.13
LSM3P62310 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.73□□□□□ -2.13
LSM3P62310 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.73□□□□□ -2.13
LSM3P62310 MIR3609-201ENST00000582661 80 ntBASIC1.73□□□□□ -2.13
LSM3P62310 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC1.73□□□□□ -2.13
LSM3P62310 SNORD14A-201ENST00000606526 91 ntBASIC1.73□□□□□ -2.13
LSM3P62310 AP004247.3-201ENST00000608682 624 ntBASIC1.73□□□□□ -2.13
LSM3P62310 OR10AB1P-201ENST00000609613 938 ntBASIC1.73□□□□□ -2.13
LSM3P62310 AL161629.2-201ENST00000615347 275 ntBASIC1.73□□□□□ -2.13
LSM3P62310 OR1S1-201ENST00000624470 978 ntBASIC1.73□□□□□ -2.13
LSM3P62310 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
LSM3P62310 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
LSM3P62310 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
LSM3P62310 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
LSM3P62310 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.72□□□□□ -2.13
LSM3P62310 NDUFB4P4-201ENST00000404822 243 ntBASIC1.72□□□□□ -2.13
LSM3P62310 OR4K11P-201ENST00000431829 904 ntBASIC1.72□□□□□ -2.13
LSM3P62310 RNF2P1-201ENST00000442955 1010 ntBASIC1.72□□□□□ -2.13
LSM3P62310 AL136380.1-201ENST00000447970 162 ntBASIC1.72□□□□□ -2.13
LSM3P62310 snoU13.28-201ENST00000459235 104 ntBASIC1.72□□□□□ -2.13
LSM3P62310 AC090453.1-201ENST00000495560 436 ntBASIC1.72□□□□□ -2.13
LSM3P62310 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.72□□□□□ -2.13
LSM3P62310 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.72□□□□□ -2.13
LSM3P62310 AC104057.1-201ENST00000515547 497 ntBASIC1.72□□□□□ -2.13
LSM3P62310 HAUS1P3-201ENST00000523909 662 ntBASIC1.72□□□□□ -2.13
LSM3P62310 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.72□□□□□ -2.13
LSM3P62310 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.72□□□□□ -2.13
LSM3P62310 AC234778.2-201ENST00000566241 354 ntBASIC1.72□□□□□ -2.13
LSM3P62310 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
LSM3P62310 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.72□□□□□ -2.13
LSM3P62310 AC027309.3-201ENST00000623419 351 ntBASIC1.72□□□□□ -2.13
LSM3P62310 AC040168.1-201ENST00000623594 991 ntBASIC1.72□□□□□ -2.13
LSM3P62310 AC012640.5-201ENST00000623897 319 ntBASIC1.72□□□□□ -2.13
LSM3P62310 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.72□□□□□ -2.13
LSM3P62310 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.71□□□□□ -2.14
LSM3P62310 AC009812.4-201ENST00000569134 1805 ntBASIC1.71□□□□□ -2.14
LSM3P62310 FTLP6-201ENST00000355274 422 ntBASIC1.71□□□□□ -2.14
LSM3P62310 AC062016.1-201ENST00000355719 319 ntBASIC1.71□□□□□ -2.14
LSM3P62310 MIR670-201ENST00000390142 98 ntBASIC1.71□□□□□ -2.14
LSM3P62310 RNU6-821P-201ENST00000390995 107 ntBASIC1.71□□□□□ -2.14
LSM3P62310 AL513331.1-201ENST00000411908 397 ntBASIC1.71□□□□□ -2.14
LSM3P62310 RPS3AP9-201ENST00000417027 792 ntBASIC1.71□□□□□ -2.14
LSM3P62310 AL365496.1-201ENST00000426885 215 ntBASIC1.71□□□□□ -2.14
LSM3P62310 AL590762.3-201ENST00000436372 640 ntBASIC1.71□□□□□ -2.14
LSM3P62310 AC107083.1-201ENST00000439643 279 ntBASIC1.71□□□□□ -2.14
LSM3P62310 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.71□□□□□ -2.14
LSM3P62310 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.71□□□□□ -2.14
LSM3P62310 RN7SL432P-201ENST00000484057 298 ntBASIC1.71□□□□□ -2.14
LSM3P62310 IGKV3-31-201ENST00000523109 329 ntBASIC1.71□□□□□ -2.14
LSM3P62310 COX6CP5-201ENST00000527162 228 ntBASIC1.71□□□□□ -2.14
LSM3P62310 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.14
LSM3P62310 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC1.71□□□□□ -2.14
LSM3P62310 AMZ2P1-203ENST00000565833 850 ntBASIC1.71□□□□□ -2.14
LSM3P62310 RPS15AP11-201ENST00000594193 385 ntBASIC1.71□□□□□ -2.14
LSM3P62310 NRBF2P5-201ENST00000603087 788 ntBASIC1.71□□□□□ -2.14
LSM3P62310 DPRXP5-201ENST00000604662 539 ntBASIC1.71□□□□□ -2.14
LSM3P62310 AL365361.1-201ENST00000566942 3481 ntBASIC1.71□□□□□ -2.14
LSM3P62310 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms