Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 COX6CP5-201ENST00000527162 228 ntBASIC1.6□□□□□ -2.15
SNCAP37840 FAM92A1P1-201ENST00000528023 890 ntBASIC1.6□□□□□ -2.15
SNCAP37840 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.6□□□□□ -2.15
SNCAP37840 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC1.6□□□□□ -2.15
SNCAP37840 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.6□□□□□ -2.15
SNCAP37840 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.6□□□□□ -2.15
SNCAP37840 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.6□□□□□ -2.15
SNCAP37840 HSPE1P7-201ENST00000604681 321 ntBASIC1.6□□□□□ -2.15
SNCAP37840 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.6□□□□□ -2.15
SNCAP37840 AC092650.2-201ENST00000619984 902 ntBASIC1.6□□□□□ -2.15
SNCAP37840 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
SNCAP37840 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
SNCAP37840 AL359893.1-201ENST00000447628 1580 ntBASIC1.59□□□□□ -2.15
SNCAP37840 MTND5P6-201ENST00000422338 1798 ntBASIC1.59□□□□□ -2.15
SNCAP37840 RNU6-234P-201ENST00000365229 104 ntBASIC1.59□□□□□ -2.15
SNCAP37840 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
SNCAP37840 XGY1-201ENST00000381172 446 ntBASIC1.59□□□□□ -2.15
SNCAP37840 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC1.59□□□□□ -2.15
SNCAP37840 MIR676-201ENST00000390702 67 ntBASIC1.59□□□□□ -2.15
SNCAP37840 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
SNCAP37840 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.59□□□□□ -2.15
SNCAP37840 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC1.59□□□□□ -2.15
SNCAP37840 HSPE1P6-201ENST00000479457 291 ntBASIC1.59□□□□□ -2.15
SNCAP37840 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC1.59□□□□□ -2.15
SNCAP37840 NDUFB4P2-201ENST00000509515 391 ntBASIC1.59□□□□□ -2.15
SNCAP37840 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC1.59□□□□□ -2.15
SNCAP37840 CYCSP26-201ENST00000534107 320 ntBASIC1.59□□□□□ -2.15
SNCAP37840 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.59□□□□□ -2.15
SNCAP37840 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC1.59□□□□□ -2.15
SNCAP37840 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.59□□□□□ -2.15
SNCAP37840 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.59□□□□□ -2.15
SNCAP37840 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.59□□□□□ -2.15
SNCAP37840 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC1.59□□□□□ -2.15
SNCAP37840 AP004372.1-201ENST00000604842 844 ntBASIC1.59□□□□□ -2.15
SNCAP37840 SNORD14A-201ENST00000606526 91 ntBASIC1.59□□□□□ -2.15
SNCAP37840 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC1.59□□□□□ -2.15
SNCAP37840 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.59□□□□□ -2.15
SNCAP37840 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.59□□□□□ -2.16
SNCAP37840 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SNCAP37840 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
SNCAP37840 RNU6-618P-201ENST00000363518 112 ntBASIC1.58□□□□□ -2.16
SNCAP37840 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SNCAP37840 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
SNCAP37840 SFR1P1-201ENST00000403720 688 ntBASIC1.58□□□□□ -2.16
SNCAP37840 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.58□□□□□ -2.16
SNCAP37840 EIF1AXP1-201ENST00000419267 435 ntBASIC1.58□□□□□ -2.16
SNCAP37840 AL645638.1-201ENST00000440519 361 ntBASIC1.58□□□□□ -2.16
SNCAP37840 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC1.58□□□□□ -2.16
SNCAP37840 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC1.58□□□□□ -2.16
SNCAP37840 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.58□□□□□ -2.16
SNCAP37840 MTCO3P11-201ENST00000455103 774 ntBASIC1.58□□□□□ -2.16
SNCAP37840 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC1.58□□□□□ -2.16
SNCAP37840 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.58□□□□□ -2.16
SNCAP37840 IGKV3-31-201ENST00000523109 329 ntBASIC1.58□□□□□ -2.16
SNCAP37840 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
SNCAP37840 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SNCAP37840 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.58□□□□□ -2.16
SNCAP37840 AL096840.1-201ENST00000603287 93 ntBASIC1.58□□□□□ -2.16
SNCAP37840 AC005332.10-201ENST00000612725 619 ntBASIC1.58□□□□□ -2.16
SNCAP37840 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
SNCAP37840 AL355810.1-201ENST00000614629 552 ntBASIC1.58□□□□□ -2.16
SNCAP37840 AL360181.4-201ENST00000621752 134 ntBASIC1.58□□□□□ -2.16
SNCAP37840 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC1.58□□□□□ -2.16
SNCAP37840 AC091932.3-201ENST00000624223 323 ntBASIC1.58□□□□□ -2.16
SNCAP37840 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.58□□□□□ -2.16
SNCAP37840 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.58□□□□□ -2.16
SNCAP37840 MIR219B-201ENST00000637023 88 ntBASIC1.58□□□□□ -2.16
SNCAP37840 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
SNCAP37840 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SNCAP37840 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.58□□□□□ -2.16
SNCAP37840 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC1.57□□□□□ -2.16
SNCAP37840 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
SNCAP37840 SNORA38-201ENST00000363946 132 ntBASIC1.57□□□□□ -2.16
SNCAP37840 AL024474.1-201ENST00000404655 591 ntBASIC1.57□□□□□ -2.16
SNCAP37840 RNU6-193P-201ENST00000410977 107 ntBASIC1.57□□□□□ -2.16
SNCAP37840 AC234782.4-201ENST00000417646 1048 ntBASIC1.57□□□□□ -2.16
SNCAP37840 AL139413.1-201ENST00000421309 217 ntBASIC1.57□□□□□ -2.16
SNCAP37840 RPL31P63-201ENST00000422565 375 ntBASIC1.57□□□□□ -2.16
SNCAP37840 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC1.57□□□□□ -2.16
SNCAP37840 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC1.57□□□□□ -2.16
SNCAP37840 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.57□□□□□ -2.16
SNCAP37840 PPP1R2P5-201ENST00000457256 603 ntBASIC1.57□□□□□ -2.16
SNCAP37840 RNA5SP233-201ENST00000459153 113 ntBASIC1.57□□□□□ -2.16
SNCAP37840 AP001486.1-201ENST00000463339 476 ntBASIC1.57□□□□□ -2.16
SNCAP37840 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC1.57□□□□□ -2.16
SNCAP37840 OR5H5P-201ENST00000503164 928 ntBASIC1.57□□□□□ -2.16
SNCAP37840 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.57□□□□□ -2.16
SNCAP37840 AC093281.2-201ENST00000510153 597 ntBASIC1.57□□□□□ -2.16
SNCAP37840 IGKV2-36-201ENST00000519999 223 ntBASIC1.57□□□□□ -2.16
SNCAP37840 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC1.57□□□□□ -2.16
SNCAP37840 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.57□□□□□ -2.16
SNCAP37840 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.57□□□□□ -2.16
SNCAP37840 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.57□□□□□ -2.16
SNCAP37840 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC1.57□□□□□ -2.16
SNCAP37840 AC090525.3-201ENST00000605601 189 ntBASIC1.57□□□□□ -2.16
SNCAP37840 Y_RNA.783-201ENST00000613546 102 ntBASIC1.57□□□□□ -2.16
SNCAP37840 AC025016.1-201ENST00000616746 682 ntBASIC1.57□□□□□ -2.16
SNCAP37840 AL133370.2-201ENST00000619934 439 ntBASIC1.57□□□□□ -2.16
SNCAP37840 OR1S1-201ENST00000624470 978 ntBASIC1.57□□□□□ -2.16
SNCAP37840 AC103710.2-202ENST00000641454 2853 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms