Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 RNU6-953P-201ENST00000459154 107 ntBASIC5.78□□□□□ -1.48
VARSP26640 AC083795.1-201ENST00000491760 320 ntBASIC5.78□□□□□ -1.48
VARSP26640 AC006499.3-201ENST00000506077 748 ntBASIC5.78□□□□□ -1.48
VARSP26640 IGKV3D-25-201ENST00000519599 235 ntBASIC5.78□□□□□ -1.48
VARSP26640 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.78□□□□□ -1.48
VARSP26640 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.78□□□□□ -1.48
VARSP26640 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.78□□□□□ -1.48
VARSP26640 AC007458.1-201ENST00000542812 373 ntBASIC5.78□□□□□ -1.48
VARSP26640 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.78□□□□□ -1.48
VARSP26640 FKBP1BP1-201ENST00000553366 325 ntBASIC5.78□□□□□ -1.48
VARSP26640 RN7SL652P-201ENST00000577769 300 ntBASIC5.78□□□□□ -1.48
VARSP26640 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.78□□□□□ -1.48
VARSP26640 AC072026.1-201ENST00000605023 201 ntBASIC5.78□□□□□ -1.48
VARSP26640 AC006329.2-201ENST00000611491 394 ntBASIC5.78□□□□□ -1.48
VARSP26640 AC123768.4-201ENST00000616244 701 ntBASIC5.78□□□□□ -1.48
VARSP26640 U6.92-201ENST00000636464 89 ntBASIC5.78□□□□□ -1.48
VARSP26640 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.78□□□□□ -1.48
VARSP26640 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.78□□□□□ -1.48
VARSP26640 AC012254.3-201ENST00000591183 2117 ntBASIC5.78□□□□□ -1.48
VARSP26640 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VARSP26640 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
VARSP26640 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VARSP26640 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
VARSP26640 AC004656.1-201ENST00000568479 4951 ntBASIC5.77□□□□□ -1.49
VARSP26640 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
VARSP26640 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
VARSP26640 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VARSP26640 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VARSP26640 THAP12P9-201ENST00000503971 2360 ntBASIC5.77□□□□□ -1.49
VARSP26640 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.77□□□□□ -1.49
VARSP26640 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
VARSP26640 U3.10-201ENST00000364459 214 ntBASIC5.77□□□□□ -1.49
VARSP26640 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VARSP26640 RNU6-804P-201ENST00000384286 107 ntBASIC5.77□□□□□ -1.49
VARSP26640 HSPE1P8-201ENST00000406997 288 ntBASIC5.77□□□□□ -1.49
VARSP26640 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.77□□□□□ -1.49
VARSP26640 AC017079.2-201ENST00000416102 485 ntBASIC5.77□□□□□ -1.49
VARSP26640 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.77□□□□□ -1.49
VARSP26640 RPL30P3-201ENST00000424262 333 ntBASIC5.77□□□□□ -1.49
VARSP26640 MTND6P12-201ENST00000428247 522 ntBASIC5.77□□□□□ -1.49
VARSP26640 AC092573.2-201ENST00000434546 243 ntBASIC5.77□□□□□ -1.49
VARSP26640 AC007389.2-201ENST00000434630 306 ntBASIC5.77□□□□□ -1.49
VARSP26640 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.77□□□□□ -1.49
VARSP26640 AL161636.2-201ENST00000445179 927 ntBASIC5.77□□□□□ -1.49
VARSP26640 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC5.77□□□□□ -1.49
VARSP26640 ISCUP1-201ENST00000454451 448 ntBASIC5.77□□□□□ -1.49
VARSP26640 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
VARSP26640 SNORD46.2-201ENST00000516021 102 ntBASIC5.77□□□□□ -1.49
VARSP26640 RN7SKP288-201ENST00000516227 268 ntBASIC5.77□□□□□ -1.49
VARSP26640 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.77□□□□□ -1.49
VARSP26640 RAB9BP1-201ENST00000519581 626 ntBASIC5.77□□□□□ -1.49
VARSP26640 AC103783.1-201ENST00000520506 373 ntBASIC5.77□□□□□ -1.49
VARSP26640 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC5.77□□□□□ -1.49
VARSP26640 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.77□□□□□ -1.49
VARSP26640 AC090022.1-201ENST00000546569 311 ntBASIC5.77□□□□□ -1.49
VARSP26640 MIR5696-201ENST00000578474 85 ntBASIC5.77□□□□□ -1.49
VARSP26640 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC5.77□□□□□ -1.49
VARSP26640 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VARSP26640 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.77□□□□□ -1.49
VARSP26640 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VARSP26640 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.77□□□□□ -1.49
VARSP26640 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VARSP26640 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
VARSP26640 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.76□□□□□ -1.49
VARSP26640 AL451142.2-201ENST00000429076 2090 ntBASIC5.76□□□□□ -1.49
VARSP26640 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
VARSP26640 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
VARSP26640 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VARSP26640 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VARSP26640 MTND5P9-201ENST00000503854 1755 ntBASIC5.76□□□□□ -1.49
VARSP26640 RN7SKP128-201ENST00000364270 303 ntBASIC5.76□□□□□ -1.49
VARSP26640 MIR578-201ENST00000384828 96 ntBASIC5.76□□□□□ -1.49
VARSP26640 RN7SKP293-201ENST00000411389 296 ntBASIC5.76□□□□□ -1.49
VARSP26640 MYL6P5-201ENST00000412707 459 ntBASIC5.76□□□□□ -1.49
VARSP26640 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.76□□□□□ -1.49
VARSP26640 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC5.76□□□□□ -1.49
VARSP26640 AL360271.2-201ENST00000447710 161 ntBASIC5.76□□□□□ -1.49
VARSP26640 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.76□□□□□ -1.49
VARSP26640 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC5.76□□□□□ -1.49
VARSP26640 AL445433.1-201ENST00000457507 257 ntBASIC5.76□□□□□ -1.49
VARSP26640 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC5.76□□□□□ -1.49
VARSP26640 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.76□□□□□ -1.49
VARSP26640 SCARNA18.1-201ENST00000516330 83 ntBASIC5.76□□□□□ -1.49
VARSP26640 RN7SKP238-201ENST00000516483 249 ntBASIC5.76□□□□□ -1.49
VARSP26640 AL442163.3-201ENST00000554110 156 ntBASIC5.76□□□□□ -1.49
VARSP26640 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.76□□□□□ -1.49
VARSP26640 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.76□□□□□ -1.49
VARSP26640 AC243829.7-201ENST00000633081 225 ntBASIC5.76□□□□□ -1.49
VARSP26640 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
VARSP26640 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.76□□□□□ -1.49
VARSP26640 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
VARSP26640 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VARSP26640 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.76□□□□□ -1.49
VARSP26640 SMG1P6-201ENST00000532337 2930 ntBASIC5.76□□□□□ -1.49
VARSP26640 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VARSP26640 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.76□□□□□ -1.49
VARSP26640 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VARSP26640 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VARSP26640 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VARSP26640 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms