Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 ZNF971P-201ENST00000562068 1249 ntBASIC2.23□□□□□ -2.05
COL5A1P20908 AC090666.1-201ENST00000578241 445 ntBASIC2.23□□□□□ -2.05
COL5A1P20908 MTCO2P2-201ENST00000591258 225 ntBASIC2.23□□□□□ -2.05
COL5A1P20908 MTCO2P22-201ENST00000603246 681 ntBASIC2.23□□□□□ -2.05
COL5A1P20908 AC011472.4-201ENST00000615848 491 ntBASIC2.23□□□□□ -2.05
COL5A1P20908 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
COL5A1P20908 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.22□□□□□ -2.05
COL5A1P20908 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
COL5A1P20908 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
COL5A1P20908 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
COL5A1P20908 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
COL5A1P20908 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.22□□□□□ -2.05
COL5A1P20908 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
COL5A1P20908 AL356292.1-201ENST00000283110 373 ntBASIC2.22□□□□□ -2.05
COL5A1P20908 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
COL5A1P20908 AF228730.1-201ENST00000397972 663 ntBASIC2.22□□□□□ -2.05
COL5A1P20908 RNA5SP498-201ENST00000411342 120 ntBASIC2.22□□□□□ -2.05
COL5A1P20908 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC2.22□□□□□ -2.05
COL5A1P20908 MTATP6P17-201ENST00000431030 672 ntBASIC2.22□□□□□ -2.05
COL5A1P20908 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC2.22□□□□□ -2.05
COL5A1P20908 MED6P1-201ENST00000439659 713 ntBASIC2.22□□□□□ -2.05
COL5A1P20908 UBE2V1P5-201ENST00000440070 405 ntBASIC2.22□□□□□ -2.05
COL5A1P20908 HMGB1P48-201ENST00000446155 598 ntBASIC2.22□□□□□ -2.05
COL5A1P20908 EXOSC3P1-201ENST00000448649 500 ntBASIC2.22□□□□□ -2.05
COL5A1P20908 AC107398.1-201ENST00000486904 505 ntBASIC2.22□□□□□ -2.05
COL5A1P20908 AC106872.3-201ENST00000495104 446 ntBASIC2.22□□□□□ -2.05
COL5A1P20908 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.22□□□□□ -2.05
COL5A1P20908 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.22□□□□□ -2.05
COL5A1P20908 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.22□□□□□ -2.05
COL5A1P20908 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.22□□□□□ -2.05
COL5A1P20908 SNORA31.13-201ENST00000516624 135 ntBASIC2.22□□□□□ -2.05
COL5A1P20908 SNORA31.15-201ENST00000516771 132 ntBASIC2.22□□□□□ -2.05
COL5A1P20908 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.22□□□□□ -2.05
COL5A1P20908 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.22□□□□□ -2.05
COL5A1P20908 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
COL5A1P20908 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.22□□□□□ -2.05
COL5A1P20908 AC099785.1-201ENST00000605697 437 ntBASIC2.22□□□□□ -2.05
COL5A1P20908 AL627309.6-201ENST00000606857 840 ntBASIC2.22□□□□□ -2.05
COL5A1P20908 AC067747.1-201ENST00000608026 250 ntBASIC2.22□□□□□ -2.05
COL5A1P20908 AP001521.1-201ENST00000609150 300 ntBASIC2.22□□□□□ -2.05
COL5A1P20908 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
COL5A1P20908 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
COL5A1P20908 MTND5P11-201ENST00000511037 1812 ntBASIC2.22□□□□□ -2.05
COL5A1P20908 RNU1-17P-201ENST00000363022 152 ntBASIC2.21□□□□□ -2.05
COL5A1P20908 RNU1-91P-201ENST00000364746 163 ntBASIC2.21□□□□□ -2.05
COL5A1P20908 SNORD116-12-201ENST00000384468 92 ntBASIC2.21□□□□□ -2.05
COL5A1P20908 MIR142-201ENST00000384835 87 ntBASIC2.21□□□□□ -2.05
COL5A1P20908 MIR92A2-201ENST00000385299 75 ntBASIC2.21□□□□□ -2.05
COL5A1P20908 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.21□□□□□ -2.05
COL5A1P20908 HMGB1P11-201ENST00000413899 637 ntBASIC2.21□□□□□ -2.05
COL5A1P20908 TRIM60P5Y-201ENST00000413946 574 ntBASIC2.21□□□□□ -2.05
COL5A1P20908 SPA17P1-201ENST00000416656 452 ntBASIC2.21□□□□□ -2.05
COL5A1P20908 ATG3P1-201ENST00000419507 911 ntBASIC2.21□□□□□ -2.05
COL5A1P20908 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.21□□□□□ -2.05
COL5A1P20908 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC2.21□□□□□ -2.05
COL5A1P20908 ARF4P4-201ENST00000439608 520 ntBASIC2.21□□□□□ -2.05
COL5A1P20908 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.21□□□□□ -2.05
COL5A1P20908 AC092685.1-201ENST00000447960 1243 ntBASIC2.21□□□□□ -2.05
COL5A1P20908 AL009048.1-201ENST00000450437 298 ntBASIC2.21□□□□□ -2.05
COL5A1P20908 AL035407.2-201ENST00000454090 378 ntBASIC2.21□□□□□ -2.05
COL5A1P20908 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2.21□□□□□ -2.05
COL5A1P20908 AC026412.2-201ENST00000512270 1075 ntBASIC2.21□□□□□ -2.05
COL5A1P20908 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.21□□□□□ -2.05
COL5A1P20908 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.21□□□□□ -2.05
COL5A1P20908 RNU6-1028P-201ENST00000517164 93 ntBASIC2.21□□□□□ -2.05
COL5A1P20908 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.21□□□□□ -2.05
COL5A1P20908 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.21□□□□□ -2.05
COL5A1P20908 MTCYBP20-201ENST00000524239 1129 ntBASIC2.21□□□□□ -2.05
COL5A1P20908 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.21□□□□□ -2.05
COL5A1P20908 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.21□□□□□ -2.05
COL5A1P20908 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.21□□□□□ -2.05
COL5A1P20908 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC2.21□□□□□ -2.05
COL5A1P20908 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.21□□□□□ -2.05
COL5A1P20908 AL445435.1-201ENST00000604232 665 ntBASIC2.21□□□□□ -2.05
COL5A1P20908 AL451074.6-201ENST00000608512 729 ntBASIC2.21□□□□□ -2.05
COL5A1P20908 AL157392.4-201ENST00000609756 345 ntBASIC2.21□□□□□ -2.05
COL5A1P20908 AC006386.1-201ENST00000619436 415 ntBASIC2.21□□□□□ -2.05
COL5A1P20908 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.21□□□□□ -2.05
COL5A1P20908 AC092447.7-201ENST00000422212 1621 ntBASIC2.21□□□□□ -2.05
COL5A1P20908 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
COL5A1P20908 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.21□□□□□ -2.06
COL5A1P20908 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
COL5A1P20908 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
COL5A1P20908 AC106754.1-201ENST00000562632 1513 ntBASIC2.21□□□□□ -2.06
COL5A1P20908 SNORD56.4-201ENST00000363883 71 ntBASIC2.21□□□□□ -2.06
COL5A1P20908 RNU4-7P-201ENST00000364758 141 ntBASIC2.21□□□□□ -2.06
COL5A1P20908 U8.9-201ENST00000365667 134 ntBASIC2.21□□□□□ -2.06
COL5A1P20908 SNORA26.7-201ENST00000391288 122 ntBASIC2.21□□□□□ -2.06
COL5A1P20908 HMGB1P10-201ENST00000395823 563 ntBASIC2.21□□□□□ -2.06
COL5A1P20908 AL049545.1-201ENST00000401856 572 ntBASIC2.21□□□□□ -2.06
COL5A1P20908 AL023284.1-201ENST00000403956 276 ntBASIC2.21□□□□□ -2.06
COL5A1P20908 RNU4-74P-201ENST00000411280 161 ntBASIC2.21□□□□□ -2.06
COL5A1P20908 HIGD1AP15-201ENST00000416198 280 ntBASIC2.21□□□□□ -2.06
COL5A1P20908 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.21□□□□□ -2.06
COL5A1P20908 FO393419.3-201ENST00000428741 282 ntBASIC2.21□□□□□ -2.06
COL5A1P20908 MTND2P5-201ENST00000432656 1006 ntBASIC2.21□□□□□ -2.06
COL5A1P20908 AL096803.2-201ENST00000450032 677 ntBASIC2.21□□□□□ -2.06
COL5A1P20908 AP000873.1-201ENST00000463987 400 ntBASIC2.21□□□□□ -2.06
COL5A1P20908 AC004263.1-201ENST00000479327 332 ntBASIC2.21□□□□□ -2.06
COL5A1P20908 FAM92A1P2-202ENST00000504766 877 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 150 ms