Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC5.5□□□□□ -1.53
ERCC3P19447 HMGB1P27-201ENST00000431429 603 ntBASIC5.5□□□□□ -1.53
ERCC3P19447 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.5□□□□□ -1.53
ERCC3P19447 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.5□□□□□ -1.53
ERCC3P19447 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.5□□□□□ -1.53
ERCC3P19447 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC5.5□□□□□ -1.53
ERCC3P19447 RPL21P8-201ENST00000465083 535 ntBASIC5.5□□□□□ -1.53
ERCC3P19447 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC5.5□□□□□ -1.53
ERCC3P19447 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.5□□□□□ -1.53
ERCC3P19447 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC5.5□□□□□ -1.53
ERCC3P19447 RN7SKP46-201ENST00000515942 234 ntBASIC5.5□□□□□ -1.53
ERCC3P19447 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC5.5□□□□□ -1.53
ERCC3P19447 MTND4P7-201ENST00000523876 130 ntBASIC5.5□□□□□ -1.53
ERCC3P19447 AL355836.1-201ENST00000555951 870 ntBASIC5.5□□□□□ -1.53
ERCC3P19447 AC012182.1-201ENST00000570133 895 ntBASIC5.5□□□□□ -1.53
ERCC3P19447 AC005951.2-201ENST00000576282 495 ntBASIC5.5□□□□□ -1.53
ERCC3P19447 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC5.5□□□□□ -1.53
ERCC3P19447 AL590392.1-201ENST00000604960 446 ntBASIC5.5□□□□□ -1.53
ERCC3P19447 AL356218.2-201ENST00000605264 187 ntBASIC5.5□□□□□ -1.53
ERCC3P19447 uc_338.34-201ENST00000617467 174 ntBASIC5.5□□□□□ -1.53
ERCC3P19447 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC5.5□□□□□ -1.53
ERCC3P19447 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.5□□□□□ -1.53
ERCC3P19447 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ERCC3P19447 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.5□□□□□ -1.53
ERCC3P19447 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
ERCC3P19447 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
ERCC3P19447 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.49□□□□□ -1.53
ERCC3P19447 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.49□□□□□ -1.53
ERCC3P19447 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
ERCC3P19447 AC116667.1-201ENST00000604855 2072 ntBASIC5.49□□□□□ -1.53
ERCC3P19447 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ERCC3P19447 AC009812.4-201ENST00000569134 1805 ntBASIC5.49□□□□□ -1.53
ERCC3P19447 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ERCC3P19447 RNU6-845P-201ENST00000362578 103 ntBASIC5.49□□□□□ -1.53
ERCC3P19447 Y_RNA.142-201ENST00000363491 102 ntBASIC5.49□□□□□ -1.53
ERCC3P19447 RNA5SP447-201ENST00000363749 119 ntBASIC5.49□□□□□ -1.53
ERCC3P19447 RNU6-190P-201ENST00000384154 102 ntBASIC5.49□□□□□ -1.53
ERCC3P19447 RNA5SP397-201ENST00000391323 118 ntBASIC5.49□□□□□ -1.53
ERCC3P19447 RNA5SP239-201ENST00000410218 129 ntBASIC5.49□□□□□ -1.53
ERCC3P19447 RNU2-41P-201ENST00000410991 178 ntBASIC5.49□□□□□ -1.53
ERCC3P19447 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC5.49□□□□□ -1.53
ERCC3P19447 RSL24D1P6-201ENST00000426934 401 ntBASIC5.49□□□□□ -1.53
ERCC3P19447 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
ERCC3P19447 RPS6P12-201ENST00000432491 726 ntBASIC5.49□□□□□ -1.53
ERCC3P19447 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC5.49□□□□□ -1.53
ERCC3P19447 RPL23AP31-201ENST00000456160 467 ntBASIC5.49□□□□□ -1.53
ERCC3P19447 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
ERCC3P19447 AC106872.2-201ENST00000494303 480 ntBASIC5.49□□□□□ -1.53
ERCC3P19447 RPS27AP13-201ENST00000498403 237 ntBASIC5.49□□□□□ -1.53
ERCC3P19447 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC5.49□□□□□ -1.53
ERCC3P19447 MTND3P22-201ENST00000510932 243 ntBASIC5.49□□□□□ -1.53
ERCC3P19447 AC007016.1-201ENST00000512110 244 ntBASIC5.49□□□□□ -1.53
ERCC3P19447 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC5.49□□□□□ -1.53
ERCC3P19447 RNA5SP497-201ENST00000516081 97 ntBASIC5.49□□□□□ -1.53
ERCC3P19447 Y_RNA.689-201ENST00000516589 107 ntBASIC5.49□□□□□ -1.53
ERCC3P19447 AC109635.4-202ENST00000531666 412 ntBASIC5.49□□□□□ -1.53
ERCC3P19447 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC5.49□□□□□ -1.53
ERCC3P19447 RAB11AP2-201ENST00000545905 639 ntBASIC5.49□□□□□ -1.53
ERCC3P19447 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
ERCC3P19447 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC5.49□□□□□ -1.53
ERCC3P19447 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC5.49□□□□□ -1.53
ERCC3P19447 AC007619.2-201ENST00000605743 379 ntBASIC5.49□□□□□ -1.53
ERCC3P19447 AC005858.4-201ENST00000623191 700 ntBASIC5.49□□□□□ -1.53
ERCC3P19447 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC5.49□□□□□ -1.53
ERCC3P19447 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
ERCC3P19447 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ERCC3P19447 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.49□□□□□ -1.53
ERCC3P19447 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.49□□□□□ -1.53
ERCC3P19447 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
ERCC3P19447 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5.49□□□□□ -1.53
ERCC3P19447 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.48□□□□□ -1.53
ERCC3P19447 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ERCC3P19447 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ERCC3P19447 TLK1P1-201ENST00000456760 2440 ntBASIC5.48□□□□□ -1.53
ERCC3P19447 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC5.48□□□□□ -1.53
ERCC3P19447 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ERCC3P19447 RNU6-694P-201ENST00000364071 147 ntBASIC5.48□□□□□ -1.53
ERCC3P19447 RNU4-20P-201ENST00000365601 151 ntBASIC5.48□□□□□ -1.53
ERCC3P19447 MT-TD-201ENST00000387419 68 ntBASIC5.48□□□□□ -1.53
ERCC3P19447 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ERCC3P19447 RPL32P23-201ENST00000397237 405 ntBASIC5.48□□□□□ -1.53
ERCC3P19447 RNU6-387P-201ENST00000411331 105 ntBASIC5.48□□□□□ -1.53
ERCC3P19447 RPL7P46-201ENST00000425129 740 ntBASIC5.48□□□□□ -1.53
ERCC3P19447 RPS17P8-201ENST00000434525 335 ntBASIC5.48□□□□□ -1.53
ERCC3P19447 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC5.48□□□□□ -1.53
ERCC3P19447 snoU13.4-201ENST00000458916 104 ntBASIC5.48□□□□□ -1.53
ERCC3P19447 AC007547.1-201ENST00000462177 490 ntBASIC5.48□□□□□ -1.53
ERCC3P19447 RN7SL558P-201ENST00000497468 299 ntBASIC5.48□□□□□ -1.53
ERCC3P19447 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC5.48□□□□□ -1.53
ERCC3P19447 RN7SKP122-201ENST00000515923 296 ntBASIC5.48□□□□□ -1.53
ERCC3P19447 RNU1-6P-201ENST00000516290 144 ntBASIC5.48□□□□□ -1.53
ERCC3P19447 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC5.48□□□□□ -1.53
ERCC3P19447 AP006587.4-201ENST00000526053 529 ntBASIC5.48□□□□□ -1.53
ERCC3P19447 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ERCC3P19447 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC5.48□□□□□ -1.53
ERCC3P19447 TOMM20P2-201ENST00000540082 421 ntBASIC5.48□□□□□ -1.53
ERCC3P19447 MDM2-233ENST00000545204 398 ntTSL 5 BASIC5.48□□□□□ -1.53
ERCC3P19447 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC5.48□□□□□ -1.53
ERCC3P19447 AC106782.4-201ENST00000568264 210 ntBASIC5.48□□□□□ -1.53
ERCC3P19447 AC005668.1-201ENST00000571142 476 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms