Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
LIG1P18858 SAMMSON-226ENST00000642089 1582 ntBASIC5.46□□□□□ -1.54
LIG1P18858 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
LIG1P18858 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
LIG1P18858 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.45□□□□□ -1.54
LIG1P18858 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.45□□□□□ -1.54
LIG1P18858 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
LIG1P18858 TAB3P1-202ENST00000452645 1634 ntBASIC5.45□□□□□ -1.54
LIG1P18858 A2MP1-204ENST00000566278 4130 ntBASIC5.45□□□□□ -1.54
LIG1P18858 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LIG1P18858 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
LIG1P18858 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LIG1P18858 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.45□□□□□ -1.54
LIG1P18858 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
LIG1P18858 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC5.45□□□□□ -1.54
LIG1P18858 SNORA62.1-201ENST00000364287 154 ntBASIC5.45□□□□□ -1.54
LIG1P18858 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
LIG1P18858 PARD3-204ENST00000374768 799 ntTSL 3 BASIC5.45□□□□□ -1.54
LIG1P18858 MIR548F5-201ENST00000408421 86 ntBASIC5.45□□□□□ -1.54
LIG1P18858 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.45□□□□□ -1.54
LIG1P18858 OR2AS1P-201ENST00000427827 319 ntBASIC5.45□□□□□ -1.54
LIG1P18858 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC5.45□□□□□ -1.54
LIG1P18858 AL451139.1-201ENST00000434718 346 ntBASIC5.45□□□□□ -1.54
LIG1P18858 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.45□□□□□ -1.54
LIG1P18858 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.45□□□□□ -1.54
LIG1P18858 MTND1P9-201ENST00000453775 944 ntBASIC5.45□□□□□ -1.54
LIG1P18858 RNU6-1208P-201ENST00000459588 107 ntBASIC5.45□□□□□ -1.54
LIG1P18858 RPL7AP28-201ENST00000464513 571 ntBASIC5.45□□□□□ -1.54
LIG1P18858 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.45□□□□□ -1.54
LIG1P18858 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC5.45□□□□□ -1.54
LIG1P18858 AC020893.1-201ENST00000502452 580 ntBASIC5.45□□□□□ -1.54
LIG1P18858 LIAS-206ENST00000513731 826 ntTSL 5 BASIC5.45□□□□□ -1.54
LIG1P18858 SMURF2P1-201ENST00000514992 481 ntBASIC5.45□□□□□ -1.54
LIG1P18858 RNU6-1088P-201ENST00000516850 104 ntBASIC5.45□□□□□ -1.54
LIG1P18858 AP000889.2-201ENST00000532684 490 ntBASIC5.45□□□□□ -1.54
LIG1P18858 AC024224.1-201ENST00000538284 609 ntBASIC5.45□□□□□ -1.54
LIG1P18858 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.45□□□□□ -1.54
LIG1P18858 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LIG1P18858 AC015912.2-201ENST00000571053 181 ntBASIC5.45□□□□□ -1.54
LIG1P18858 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC5.45□□□□□ -1.54
LIG1P18858 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.45□□□□□ -1.54
LIG1P18858 AC067852.4-201ENST00000590314 478 ntBASIC5.45□□□□□ -1.54
LIG1P18858 VN1R107P-201ENST00000601784 209 ntBASIC5.45□□□□□ -1.54
LIG1P18858 AC008782.1-201ENST00000603386 430 ntBASIC5.45□□□□□ -1.54
LIG1P18858 AP000654.2-201ENST00000605633 586 ntBASIC5.45□□□□□ -1.54
LIG1P18858 FAM25E-202ENST00000608562 189 ntBASIC5.45□□□□□ -1.54
LIG1P18858 AP001486.3-201ENST00000615334 372 ntBASIC5.45□□□□□ -1.54
LIG1P18858 uc_338.18-201ENST00000615451 175 ntBASIC5.45□□□□□ -1.54
LIG1P18858 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.45□□□□□ -1.54
LIG1P18858 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.45□□□□□ -1.54
LIG1P18858 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
LIG1P18858 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LIG1P18858 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
LIG1P18858 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
LIG1P18858 AC121333.1-201ENST00000567488 2709 ntBASIC5.44□□□□□ -1.54
LIG1P18858 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.44□□□□□ -1.54
LIG1P18858 RNA5SP191-201ENST00000362585 102 ntBASIC5.44□□□□□ -1.54
LIG1P18858 RNU1-94P-201ENST00000362627 173 ntBASIC5.44□□□□□ -1.54
LIG1P18858 Y_RNA.112-201ENST00000363250 102 ntBASIC5.44□□□□□ -1.54
LIG1P18858 Y_RNA.167-201ENST00000363735 109 ntBASIC5.44□□□□□ -1.54
LIG1P18858 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
LIG1P18858 RNU6-1029P-201ENST00000384109 107 ntBASIC5.44□□□□□ -1.54
LIG1P18858 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
LIG1P18858 MIR937-201ENST00000401271 86 ntBASIC5.44□□□□□ -1.54
LIG1P18858 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LIG1P18858 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.44□□□□□ -1.54
LIG1P18858 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC5.44□□□□□ -1.54
LIG1P18858 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC5.44□□□□□ -1.54
LIG1P18858 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC5.44□□□□□ -1.54
LIG1P18858 AL118520.1-201ENST00000450770 291 ntBASIC5.44□□□□□ -1.54
LIG1P18858 AC010733.1-201ENST00000451515 401 ntBASIC5.44□□□□□ -1.54
LIG1P18858 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC5.44□□□□□ -1.54
LIG1P18858 AL135752.1-201ENST00000479477 471 ntBASIC5.44□□□□□ -1.54
LIG1P18858 AC083904.1-201ENST00000487828 231 ntBASIC5.44□□□□□ -1.54
LIG1P18858 ALDH7A1P3-201ENST00000492517 345 ntBASIC5.44□□□□□ -1.54
LIG1P18858 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC5.44□□□□□ -1.54
LIG1P18858 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.44□□□□□ -1.54
LIG1P18858 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.44□□□□□ -1.54
LIG1P18858 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.44□□□□□ -1.54
LIG1P18858 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.44□□□□□ -1.54
LIG1P18858 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.44□□□□□ -1.54
LIG1P18858 AL118558.2-201ENST00000556294 238 ntBASIC5.44□□□□□ -1.54
LIG1P18858 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.44□□□□□ -1.54
LIG1P18858 MIR4703-201ENST00000577728 79 ntBASIC5.44□□□□□ -1.54
LIG1P18858 RN7SL176P-201ENST00000580352 264 ntBASIC5.44□□□□□ -1.54
LIG1P18858 MIR4503-201ENST00000582187 83 ntBASIC5.44□□□□□ -1.54
LIG1P18858 MIR4480-201ENST00000582492 71 ntBASIC5.44□□□□□ -1.54
LIG1P18858 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC5.44□□□□□ -1.54
LIG1P18858 BNIP3P25-201ENST00000596023 559 ntBASIC5.44□□□□□ -1.54
LIG1P18858 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC5.44□□□□□ -1.54
LIG1P18858 7SK.7-201ENST00000603504 247 ntBASIC5.44□□□□□ -1.54
LIG1P18858 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.44□□□□□ -1.54
LIG1P18858 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
LIG1P18858 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LIG1P18858 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LIG1P18858 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC5.43□□□□□ -1.54
LIG1P18858 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
LIG1P18858 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LIG1P18858 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.43□□□□□ -1.54
LIG1P18858 RNU6-511P-201ENST00000363496 107 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms