Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.86□□□□□ -1.95
HOXC4P09017 OR5J1P-201ENST00000313544 939 ntBASIC2.86□□□□□ -1.95
HOXC4P09017 SNORD113-6-201ENST00000363345 75 ntBASIC2.86□□□□□ -1.95
HOXC4P09017 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.86□□□□□ -1.95
HOXC4P09017 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
HOXC4P09017 SNORA40.2-201ENST00000390847 128 ntBASIC2.86□□□□□ -1.95
HOXC4P09017 AL049545.1-201ENST00000401856 572 ntBASIC2.86□□□□□ -1.95
HOXC4P09017 ERHP2-201ENST00000402323 299 ntBASIC2.86□□□□□ -1.95
HOXC4P09017 RNU6-575P-201ENST00000411326 105 ntBASIC2.86□□□□□ -1.95
HOXC4P09017 HMGB1P49-201ENST00000418882 569 ntBASIC2.86□□□□□ -1.95
HOXC4P09017 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
HOXC4P09017 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.86□□□□□ -1.95
HOXC4P09017 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.86□□□□□ -1.95
HOXC4P09017 RPL21P40-201ENST00000428586 483 ntBASIC2.86□□□□□ -1.95
HOXC4P09017 AC092473.1-201ENST00000441098 221 ntBASIC2.86□□□□□ -1.95
HOXC4P09017 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.86□□□□□ -1.95
HOXC4P09017 AL592437.1-201ENST00000443781 492 ntBASIC2.86□□□□□ -1.95
HOXC4P09017 RPL36AP33-201ENST00000450395 310 ntBASIC2.86□□□□□ -1.95
HOXC4P09017 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.86□□□□□ -1.95
HOXC4P09017 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.86□□□□□ -1.95
HOXC4P09017 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.86□□□□□ -1.95
HOXC4P09017 HMGB1P15-201ENST00000453854 435 ntBASIC2.86□□□□□ -1.95
HOXC4P09017 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.86□□□□□ -1.95
HOXC4P09017 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.86□□□□□ -1.95
HOXC4P09017 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.86□□□□□ -1.95
HOXC4P09017 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
HOXC4P09017 AC111000.2-201ENST00000507775 550 ntBASIC2.86□□□□□ -1.95
HOXC4P09017 RNU1-61P-201ENST00000516107 151 ntBASIC2.86□□□□□ -1.95
HOXC4P09017 AC087373.1-201ENST00000524920 491 ntBASIC2.86□□□□□ -1.95
HOXC4P09017 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.86□□□□□ -1.95
HOXC4P09017 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.86□□□□□ -1.95
HOXC4P09017 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.86□□□□□ -1.95
HOXC4P09017 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.86□□□□□ -1.95
HOXC4P09017 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.86□□□□□ -1.95
HOXC4P09017 AC034105.3-201ENST00000565294 442 ntBASIC2.86□□□□□ -1.95
HOXC4P09017 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.86□□□□□ -1.95
HOXC4P09017 AP001269.3-201ENST00000588718 329 ntBASIC2.86□□□□□ -1.95
HOXC4P09017 AC024153.1-201ENST00000603103 365 ntBASIC2.86□□□□□ -1.95
HOXC4P09017 AC015871.2-201ENST00000603605 948 ntBASIC2.86□□□□□ -1.95
HOXC4P09017 Z94722.1-201ENST00000604328 474 ntBASIC2.86□□□□□ -1.95
HOXC4P09017 AL627309.6-201ENST00000606857 840 ntBASIC2.86□□□□□ -1.95
HOXC4P09017 AL451064.1-201ENST00000607718 471 ntBASIC2.86□□□□□ -1.95
HOXC4P09017 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.86□□□□□ -1.95
HOXC4P09017 VN1R74P-201ENST00000613259 503 ntBASIC2.86□□□□□ -1.95
HOXC4P09017 AC092650.2-201ENST00000619984 902 ntBASIC2.86□□□□□ -1.95
HOXC4P09017 AP002782.1-201ENST00000623107 614 ntBASIC2.86□□□□□ -1.95
HOXC4P09017 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.86□□□□□ -1.95
HOXC4P09017 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
HOXC4P09017 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.86□□□□□ -1.95
HOXC4P09017 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.86□□□□□ -1.95
HOXC4P09017 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
HOXC4P09017 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
HOXC4P09017 SGO1P1-201ENST00000603525 1447 ntBASIC2.85□□□□□ -1.95
HOXC4P09017 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.85□□□□□ -1.95
HOXC4P09017 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
HOXC4P09017 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
HOXC4P09017 RNA5SP258-201ENST00000362750 119 ntBASIC2.85□□□□□ -1.95
HOXC4P09017 SNORD116-8-201ENST00000384365 95 ntBASIC2.85□□□□□ -1.95
HOXC4P09017 RPL21P3-201ENST00000395517 478 ntBASIC2.85□□□□□ -1.95
HOXC4P09017 TMSB4XP8-201ENST00000402089 135 ntBASIC2.85□□□□□ -1.95
HOXC4P09017 AL121978.1-201ENST00000402778 359 ntBASIC2.85□□□□□ -1.95
HOXC4P09017 AL590084.1-201ENST00000407885 387 ntBASIC2.85□□□□□ -1.95
HOXC4P09017 U3.42-201ENST00000408746 214 ntBASIC2.85□□□□□ -1.95
HOXC4P09017 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.85□□□□□ -1.95
HOXC4P09017 TMSB4XP6-201ENST00000415187 135 ntBASIC2.85□□□□□ -1.95
HOXC4P09017 AC245054.2-201ENST00000415639 319 ntBASIC2.85□□□□□ -1.95
HOXC4P09017 AC009237.2-201ENST00000421358 284 ntBASIC2.85□□□□□ -1.95
HOXC4P09017 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.85□□□□□ -1.95
HOXC4P09017 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.85□□□□□ -1.95
HOXC4P09017 TMSB4XP1-201ENST00000424567 135 ntBASIC2.85□□□□□ -1.95
HOXC4P09017 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.85□□□□□ -1.95
HOXC4P09017 AC234064.1-201ENST00000436312 247 ntBASIC2.85□□□□□ -1.95
HOXC4P09017 COX7BP2-201ENST00000437976 242 ntBASIC2.85□□□□□ -1.95
HOXC4P09017 UQCRHP3-201ENST00000451503 251 ntBASIC2.85□□□□□ -1.95
HOXC4P09017 AC104073.1-201ENST00000451988 151 ntBASIC2.85□□□□□ -1.95
HOXC4P09017 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
HOXC4P09017 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.85□□□□□ -1.95
HOXC4P09017 AC093278.1-201ENST00000494700 600 ntBASIC2.85□□□□□ -1.95
HOXC4P09017 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.85□□□□□ -1.95
HOXC4P09017 AC034244.1-201ENST00000507687 207 ntBASIC2.85□□□□□ -1.95
HOXC4P09017 AC118282.2-201ENST00000508739 374 ntBASIC2.85□□□□□ -1.95
HOXC4P09017 AC118465.1-201ENST00000513820 1271 ntBASIC2.85□□□□□ -1.95
HOXC4P09017 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.85□□□□□ -1.95
HOXC4P09017 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.85□□□□□ -1.95
HOXC4P09017 AC023050.2-201ENST00000544968 387 ntBASIC2.85□□□□□ -1.95
HOXC4P09017 LSM6P2-201ENST00000552208 177 ntBASIC2.85□□□□□ -1.95
HOXC4P09017 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC2.85□□□□□ -1.95
HOXC4P09017 NIFKP8-201ENST00000560500 874 ntBASIC2.85□□□□□ -1.95
HOXC4P09017 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC2.85□□□□□ -1.95
HOXC4P09017 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.85□□□□□ -1.95
HOXC4P09017 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.85□□□□□ -1.95
HOXC4P09017 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.85□□□□□ -1.95
HOXC4P09017 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.85□□□□□ -1.95
HOXC4P09017 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.85□□□□□ -1.95
HOXC4P09017 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.85□□□□□ -1.95
HOXC4P09017 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.85□□□□□ -1.95
HOXC4P09017 AL022161.1-201ENST00000604390 213 ntBASIC2.85□□□□□ -1.95
HOXC4P09017 AP000238.1-201ENST00000608759 426 ntBASIC2.85□□□□□ -1.95
HOXC4P09017 AC131902.3-201ENST00000611767 581 ntBASIC2.85□□□□□ -1.95
HOXC4P09017 AL592148.2-201ENST00000612210 372 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms