Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 MIR1291-201ENST00000627649 87 ntBASIC2.61□□□□□ -1.99
TPM3P06753 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
TPM3P06753 AC009812.4-201ENST00000569134 1805 ntBASIC2.61□□□□□ -1.99
TPM3P06753 MTCO1P6-201ENST00000481192 1384 ntBASIC2.61□□□□□ -1.99
TPM3P06753 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
TPM3P06753 NUP58P1-201ENST00000502546 1738 ntBASIC2.6□□□□□ -1.99
TPM3P06753 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
TPM3P06753 SNORD82-201ENST00000365530 70 ntBASIC2.6□□□□□ -1.99
TPM3P06753 AL359511.1-201ENST00000402970 211 ntBASIC2.6□□□□□ -1.99
TPM3P06753 AL355497.1-201ENST00000406262 551 ntBASIC2.6□□□□□ -1.99
TPM3P06753 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.6□□□□□ -1.99
TPM3P06753 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.6□□□□□ -1.99
TPM3P06753 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.6□□□□□ -1.99
TPM3P06753 ARL5AP4-201ENST00000430731 512 ntBASIC2.6□□□□□ -1.99
TPM3P06753 AC009296.1-201ENST00000443146 155 ntBASIC2.6□□□□□ -1.99
TPM3P06753 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.6□□□□□ -1.99
TPM3P06753 AC108734.3-201ENST00000481241 1165 ntBASIC2.6□□□□□ -1.99
TPM3P06753 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.6□□□□□ -1.99
TPM3P06753 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.6□□□□□ -1.99
TPM3P06753 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.6□□□□□ -1.99
TPM3P06753 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
TPM3P06753 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.6□□□□□ -1.99
TPM3P06753 AC012414.2-201ENST00000559474 187 ntBASIC2.6□□□□□ -1.99
TPM3P06753 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.6□□□□□ -1.99
TPM3P06753 ATP5F1P7-201ENST00000567330 760 ntBASIC2.6□□□□□ -1.99
TPM3P06753 RPS3AP23-202ENST00000574601 686 ntBASIC2.6□□□□□ -1.99
TPM3P06753 AC010738.1-201ENST00000604970 987 ntBASIC2.6□□□□□ -1.99
TPM3P06753 AC025588.4-201ENST00000615802 908 ntBASIC2.6□□□□□ -1.99
TPM3P06753 AC009318.4-201ENST00000620496 486 ntBASIC2.6□□□□□ -1.99
TPM3P06753 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.6□□□□□ -1.99
TPM3P06753 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
TPM3P06753 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.6□□□□□ -1.99
TPM3P06753 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
TPM3P06753 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
TPM3P06753 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.6□□□□□ -1.99
TPM3P06753 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.6□□□□□ -1.99
TPM3P06753 AC022336.2-201ENST00000568966 2538 ntBASIC2.6□□□□□ -1.99
TPM3P06753 MTND4P1-201ENST00000457501 1466 ntBASIC2.59□□□□□ -1.99
TPM3P06753 HMGB1P5-201ENST00000255320 642 ntBASIC2.59□□□□□ -1.99
TPM3P06753 SNORA51.11-201ENST00000384442 131 ntBASIC2.59□□□□□ -1.99
TPM3P06753 HMGB3P2-201ENST00000411913 584 ntBASIC2.59□□□□□ -1.99
TPM3P06753 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.59□□□□□ -1.99
TPM3P06753 ZNF92P1Y-201ENST00000415010 1191 ntBASIC2.59□□□□□ -1.99
TPM3P06753 KRR1P1-201ENST00000419430 803 ntBASIC2.59□□□□□ -1.99
TPM3P06753 MTATP6P11-201ENST00000428071 670 ntBASIC2.59□□□□□ -1.99
TPM3P06753 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.59□□□□□ -1.99
TPM3P06753 ELOCP3-201ENST00000439303 348 ntBASIC2.59□□□□□ -1.99
TPM3P06753 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.59□□□□□ -1.99
TPM3P06753 RNU7-26P-201ENST00000458980 63 ntBASIC2.59□□□□□ -1.99
TPM3P06753 snoU13.22-201ENST00000459428 104 ntBASIC2.59□□□□□ -1.99
TPM3P06753 RPL31P41-201ENST00000477967 372 ntBASIC2.59□□□□□ -1.99
TPM3P06753 AC004263.1-201ENST00000479327 332 ntBASIC2.59□□□□□ -1.99
TPM3P06753 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.59□□□□□ -1.99
TPM3P06753 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.59□□□□□ -1.99
TPM3P06753 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.59□□□□□ -1.99
TPM3P06753 RNA5SP24-201ENST00000516478 95 ntBASIC2.59□□□□□ -1.99
TPM3P06753 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
TPM3P06753 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.59□□□□□ -1.99
TPM3P06753 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.59□□□□□ -1.99
TPM3P06753 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC2.59□□□□□ -1.99
TPM3P06753 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.59□□□□□ -1.99
TPM3P06753 ATP1B3P1-201ENST00000605365 821 ntBASIC2.59□□□□□ -1.99
TPM3P06753 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
TPM3P06753 AC009090.3-201ENST00000616553 565 ntBASIC2.59□□□□□ -1.99
TPM3P06753 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.59□□□□□ -1.99
TPM3P06753 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.59□□□□□ -2
TPM3P06753 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
TPM3P06753 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.58□□□□□ -2
TPM3P06753 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
TPM3P06753 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
TPM3P06753 RNU6-1197P-201ENST00000391183 107 ntBASIC2.58□□□□□ -2
TPM3P06753 RNA5SP354-201ENST00000391247 136 ntBASIC2.58□□□□□ -2
TPM3P06753 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.58□□□□□ -2
TPM3P06753 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
TPM3P06753 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.58□□□□□ -2
TPM3P06753 PNRC2P1-201ENST00000423940 420 ntBASIC2.58□□□□□ -2
TPM3P06753 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.58□□□□□ -2
TPM3P06753 FCF1P1-201ENST00000432690 571 ntBASIC2.58□□□□□ -2
TPM3P06753 AC092573.2-201ENST00000434546 243 ntBASIC2.58□□□□□ -2
TPM3P06753 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
TPM3P06753 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.58□□□□□ -2
TPM3P06753 COX6CP12-201ENST00000446748 202 ntBASIC2.58□□□□□ -2
TPM3P06753 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.58□□□□□ -2
TPM3P06753 OR52A4P-202ENST00000481634 799 ntBASIC2.58□□□□□ -2
TPM3P06753 AC011825.1-201ENST00000484967 388 ntBASIC2.58□□□□□ -2
TPM3P06753 AC079804.2-201ENST00000490376 200 ntBASIC2.58□□□□□ -2
TPM3P06753 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.58□□□□□ -2
TPM3P06753 OR52A4P-203ENST00000498233 1014 ntBASIC2.58□□□□□ -2
TPM3P06753 GTF2IP9-201ENST00000502460 301 ntBASIC2.58□□□□□ -2
TPM3P06753 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.58□□□□□ -2
TPM3P06753 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.58□□□□□ -2
TPM3P06753 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC2.58□□□□□ -2
TPM3P06753 RNU6-27P-201ENST00000516146 107 ntBASIC2.58□□□□□ -2
TPM3P06753 RNA5SP320-201ENST00000516263 124 ntBASIC2.58□□□□□ -2
TPM3P06753 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.58□□□□□ -2
TPM3P06753 HMGB1P14-201ENST00000557424 591 ntBASIC2.58□□□□□ -2
TPM3P06753 HMGB1P6-201ENST00000569046 646 ntBASIC2.58□□□□□ -2
TPM3P06753 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.58□□□□□ -2
TPM3P06753 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.58□□□□□ -2
TPM3P06753 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 418.1 ms