Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC2.24□□□□□ -2.05
HLA-DQB2P05538 AC073569.3-201ENST00000619055 682 ntBASIC2.24□□□□□ -2.05
HLA-DQB2P05538 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.24□□□□□ -2.05
HLA-DQB2P05538 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.24□□□□□ -2.05
HLA-DQB2P05538 AC098679.5-201ENST00000624394 571 ntBASIC2.24□□□□□ -2.05
HLA-DQB2P05538 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
HLA-DQB2P05538 BX649567.1-201ENST00000642071 1134 ntBASIC2.24□□□□□ -2.05
HLA-DQB2P05538 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.24□□□□□ -2.05
HLA-DQB2P05538 AC138915.1-201ENST00000565427 1685 ntBASIC2.24□□□□□ -2.05
HLA-DQB2P05538 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
HLA-DQB2P05538 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
HLA-DQB2P05538 AC111188.2-201ENST00000529697 1387 ntBASIC2.23□□□□□ -2.05
HLA-DQB2P05538 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
HLA-DQB2P05538 RNU6-1074P-201ENST00000383995 104 ntBASIC2.23□□□□□ -2.05
HLA-DQB2P05538 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
HLA-DQB2P05538 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
HLA-DQB2P05538 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.23□□□□□ -2.05
HLA-DQB2P05538 RPS15AP38-201ENST00000413110 372 ntBASIC2.23□□□□□ -2.05
HLA-DQB2P05538 AF274854.1-201ENST00000413236 615 ntBASIC2.23□□□□□ -2.05
HLA-DQB2P05538 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC2.23□□□□□ -2.05
HLA-DQB2P05538 PTP4A1P7-201ENST00000423476 514 ntBASIC2.23□□□□□ -2.05
HLA-DQB2P05538 AL035410.1-201ENST00000427409 427 ntBASIC2.23□□□□□ -2.05
HLA-DQB2P05538 PTP4A1P3-201ENST00000433661 420 ntBASIC2.23□□□□□ -2.05
HLA-DQB2P05538 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.23□□□□□ -2.05
HLA-DQB2P05538 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.23□□□□□ -2.05
HLA-DQB2P05538 HSFY3P-201ENST00000444242 1191 ntBASIC2.23□□□□□ -2.05
HLA-DQB2P05538 HMGN1P5-201ENST00000448591 263 ntBASIC2.23□□□□□ -2.05
HLA-DQB2P05538 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.23□□□□□ -2.05
HLA-DQB2P05538 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.23□□□□□ -2.05
HLA-DQB2P05538 AL359385.1-201ENST00000456509 365 ntBASIC2.23□□□□□ -2.05
HLA-DQB2P05538 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.23□□□□□ -2.05
HLA-DQB2P05538 AP000852.1-201ENST00000472460 573 ntBASIC2.23□□□□□ -2.05
HLA-DQB2P05538 RPL30P14-201ENST00000482744 348 ntBASIC2.23□□□□□ -2.05
HLA-DQB2P05538 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.23□□□□□ -2.05
HLA-DQB2P05538 AC008413.1-201ENST00000511864 177 ntBASIC2.23□□□□□ -2.05
HLA-DQB2P05538 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.23□□□□□ -2.05
HLA-DQB2P05538 AC103833.1-201ENST00000517442 172 ntBASIC2.23□□□□□ -2.05
HLA-DQB2P05538 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.23□□□□□ -2.05
HLA-DQB2P05538 NBEAP1-201ENST00000554452 979 ntBASIC2.23□□□□□ -2.05
HLA-DQB2P05538 AC074051.3-201ENST00000570238 358 ntBASIC2.23□□□□□ -2.05
HLA-DQB2P05538 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
HLA-DQB2P05538 AC012669.1-201ENST00000603209 283 ntBASIC2.23□□□□□ -2.05
HLA-DQB2P05538 BNIP3P4-201ENST00000604946 565 ntBASIC2.23□□□□□ -2.05
HLA-DQB2P05538 AP004247.3-201ENST00000608682 624 ntBASIC2.23□□□□□ -2.05
HLA-DQB2P05538 AP001033.2-201ENST00000609701 1003 ntBASIC2.23□□□□□ -2.05
HLA-DQB2P05538 AC008083.4-201ENST00000615076 444 ntBASIC2.23□□□□□ -2.05
HLA-DQB2P05538 AC040168.1-201ENST00000623594 991 ntBASIC2.23□□□□□ -2.05
HLA-DQB2P05538 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.23□□□□□ -2.05
HLA-DQB2P05538 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.23□□□□□ -2.05
HLA-DQB2P05538 MTCO1P6-201ENST00000481192 1384 ntBASIC2.23□□□□□ -2.05
HLA-DQB2P05538 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
HLA-DQB2P05538 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.22□□□□□ -2.05
HLA-DQB2P05538 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
HLA-DQB2P05538 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
HLA-DQB2P05538 RNA5SP393-201ENST00000363423 117 ntBASIC2.22□□□□□ -2.05
HLA-DQB2P05538 RNU1-91P-201ENST00000364746 163 ntBASIC2.22□□□□□ -2.05
HLA-DQB2P05538 RNU1-73P-201ENST00000383971 164 ntBASIC2.22□□□□□ -2.05
HLA-DQB2P05538 CYCSP45-201ENST00000402289 315 ntBASIC2.22□□□□□ -2.05
HLA-DQB2P05538 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.22□□□□□ -2.05
HLA-DQB2P05538 AC233981.1-201ENST00000423224 461 ntBASIC2.22□□□□□ -2.05
HLA-DQB2P05538 MORF4L1P7-201ENST00000426038 703 ntBASIC2.22□□□□□ -2.05
HLA-DQB2P05538 AC093422.3-201ENST00000428506 305 ntBASIC2.22□□□□□ -2.05
HLA-DQB2P05538 LSM1P1-201ENST00000438629 273 ntBASIC2.22□□□□□ -2.05
HLA-DQB2P05538 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.22□□□□□ -2.05
HLA-DQB2P05538 MTND5P8-201ENST00000449817 1083 ntBASIC2.22□□□□□ -2.05
HLA-DQB2P05538 AC009961.3-201ENST00000449832 765 ntBASIC2.22□□□□□ -2.05
HLA-DQB2P05538 AL031183.1-201ENST00000457667 207 ntBASIC2.22□□□□□ -2.05
HLA-DQB2P05538 RPS4XP6-201ENST00000477670 797 ntBASIC2.22□□□□□ -2.05
HLA-DQB2P05538 AC004263.1-201ENST00000479327 332 ntBASIC2.22□□□□□ -2.05
HLA-DQB2P05538 VPS26AP1-201ENST00000483197 979 ntBASIC2.22□□□□□ -2.05
HLA-DQB2P05538 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.22□□□□□ -2.05
HLA-DQB2P05538 TTC39CP1-201ENST00000512513 755 ntBASIC2.22□□□□□ -2.05
HLA-DQB2P05538 AC017037.2-201ENST00000513850 890 ntBASIC2.22□□□□□ -2.05
HLA-DQB2P05538 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
HLA-DQB2P05538 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC2.22□□□□□ -2.05
HLA-DQB2P05538 GLUD1P4-201ENST00000590914 418 ntBASIC2.22□□□□□ -2.05
HLA-DQB2P05538 AC020895.1-201ENST00000595362 272 ntBASIC2.22□□□□□ -2.05
HLA-DQB2P05538 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC2.22□□□□□ -2.05
HLA-DQB2P05538 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.22□□□□□ -2.05
HLA-DQB2P05538 AC013562.2-201ENST00000611632 603 ntBASIC2.22□□□□□ -2.05
HLA-DQB2P05538 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.22□□□□□ -2.05
HLA-DQB2P05538 AC140725.3-201ENST00000616193 880 ntBASIC2.22□□□□□ -2.05
HLA-DQB2P05538 AP006248.3-201ENST00000623580 594 ntBASIC2.22□□□□□ -2.05
HLA-DQB2P05538 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.22□□□□□ -2.05
HLA-DQB2P05538 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
HLA-DQB2P05538 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
HLA-DQB2P05538 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
HLA-DQB2P05538 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.22□□□□□ -2.05
HLA-DQB2P05538 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.21□□□□□ -2.06
HLA-DQB2P05538 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
HLA-DQB2P05538 ZNF720P1-201ENST00000562403 1939 ntBASIC2.21□□□□□ -2.06
HLA-DQB2P05538 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.21□□□□□ -2.06
HLA-DQB2P05538 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.21□□□□□ -2.06
HLA-DQB2P05538 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
HLA-DQB2P05538 AC083799.1-201ENST00000366451 910 ntBASIC2.21□□□□□ -2.06
HLA-DQB2P05538 SNORA1.3-201ENST00000384676 136 ntBASIC2.21□□□□□ -2.06
HLA-DQB2P05538 AL024474.1-201ENST00000404655 591 ntBASIC2.21□□□□□ -2.06
HLA-DQB2P05538 RNU6-77P-201ENST00000410554 91 ntBASIC2.21□□□□□ -2.06
HLA-DQB2P05538 AC007064.1-201ENST00000412238 351 ntBASIC2.21□□□□□ -2.06
HLA-DQB2P05538 TATDN1P1-201ENST00000414123 891 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms