Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.18□□□□□ -1.9
CHRNA1P02708 AC123767.1-202ENST00000620407 817 ntBASIC3.18□□□□□ -1.9
CHRNA1P02708 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CHRNA1P02708 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CHRNA1P02708 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.17□□□□□ -1.9
CHRNA1P02708 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
CHRNA1P02708 AL136360.1-201ENST00000503377 1900 ntBASIC3.17□□□□□ -1.9
CHRNA1P02708 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.17□□□□□ -1.9
CHRNA1P02708 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.17□□□□□ -1.9
CHRNA1P02708 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CHRNA1P02708 NACA3P-201ENST00000359690 648 ntBASIC3.17□□□□□ -1.9
CHRNA1P02708 RNU5D-1-201ENST00000363299 116 ntBASIC3.17□□□□□ -1.9
CHRNA1P02708 SNORA9.2-201ENST00000365361 133 ntBASIC3.17□□□□□ -1.9
CHRNA1P02708 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC3.17□□□□□ -1.9
CHRNA1P02708 SNORD116-12-201ENST00000384468 92 ntBASIC3.17□□□□□ -1.9
CHRNA1P02708 RPL32P35-201ENST00000415214 394 ntBASIC3.17□□□□□ -1.9
CHRNA1P02708 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.17□□□□□ -1.9
CHRNA1P02708 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.17□□□□□ -1.9
CHRNA1P02708 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.17□□□□□ -1.9
CHRNA1P02708 AC019178.2-201ENST00000423595 505 ntBASIC3.17□□□□□ -1.9
CHRNA1P02708 AC233728.2-201ENST00000425348 757 ntBASIC3.17□□□□□ -1.9
CHRNA1P02708 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.17□□□□□ -1.9
CHRNA1P02708 RPL39P6-201ENST00000448289 150 ntBASIC3.17□□□□□ -1.9
CHRNA1P02708 AL162389.1-201ENST00000449233 177 ntBASIC3.17□□□□□ -1.9
CHRNA1P02708 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.17□□□□□ -1.9
CHRNA1P02708 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.17□□□□□ -1.9
CHRNA1P02708 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.17□□□□□ -1.9
CHRNA1P02708 AC103783.1-201ENST00000520506 373 ntBASIC3.17□□□□□ -1.9
CHRNA1P02708 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.17□□□□□ -1.9
CHRNA1P02708 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.17□□□□□ -1.9
CHRNA1P02708 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.17□□□□□ -1.9
CHRNA1P02708 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.17□□□□□ -1.9
CHRNA1P02708 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.17□□□□□ -1.9
CHRNA1P02708 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.17□□□□□ -1.9
CHRNA1P02708 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.17□□□□□ -1.9
CHRNA1P02708 MTCYBP23-201ENST00000558717 1102 ntBASIC3.17□□□□□ -1.9
CHRNA1P02708 AC010653.1-201ENST00000571108 881 ntBASIC3.17□□□□□ -1.9
CHRNA1P02708 AC012669.1-201ENST00000603209 283 ntBASIC3.17□□□□□ -1.9
CHRNA1P02708 AC024060.1-201ENST00000607052 494 ntBASIC3.17□□□□□ -1.9
CHRNA1P02708 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CHRNA1P02708 AC091046.2-201ENST00000620775 665 ntBASIC3.17□□□□□ -1.9
CHRNA1P02708 AL391262.2-201ENST00000622466 494 ntBASIC3.17□□□□□ -1.9
CHRNA1P02708 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.17□□□□□ -1.9
CHRNA1P02708 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.17□□□□□ -1.9
CHRNA1P02708 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CHRNA1P02708 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
CHRNA1P02708 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CHRNA1P02708 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
CHRNA1P02708 AL355596.1-201ENST00000565399 3996 ntBASIC3.16□□□□□ -1.9
CHRNA1P02708 AC010733.2-201ENST00000589496 5702 ntBASIC3.16□□□□□ -1.9
CHRNA1P02708 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
CHRNA1P02708 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CHRNA1P02708 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CHRNA1P02708 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CHRNA1P02708 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.16□□□□□ -1.9
CHRNA1P02708 MTND5P7-201ENST00000413558 1798 ntBASIC3.16□□□□□ -1.9
CHRNA1P02708 RNU4-51P-201ENST00000364206 140 ntBASIC3.16□□□□□ -1.9
CHRNA1P02708 snoZ40.1-201ENST00000364540 72 ntBASIC3.16□□□□□ -1.9
CHRNA1P02708 VN1R51P-201ENST00000411675 945 ntBASIC3.16□□□□□ -1.9
CHRNA1P02708 YPEL5P1-201ENST00000419731 367 ntBASIC3.16□□□□□ -1.9
CHRNA1P02708 AC013410.2-201ENST00000422627 201 ntBASIC3.16□□□□□ -1.9
CHRNA1P02708 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC3.16□□□□□ -1.9
CHRNA1P02708 PSMA6P3-201ENST00000428242 164 ntBASIC3.16□□□□□ -1.9
CHRNA1P02708 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.16□□□□□ -1.9
CHRNA1P02708 AC009969.1-201ENST00000438726 172 ntBASIC3.16□□□□□ -1.9
CHRNA1P02708 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.16□□□□□ -1.9
CHRNA1P02708 AL121871.1-201ENST00000443413 436 ntBASIC3.16□□□□□ -1.9
CHRNA1P02708 EXOSC3P1-201ENST00000448649 500 ntBASIC3.16□□□□□ -1.9
CHRNA1P02708 USP9YP34-201ENST00000453983 808 ntBASIC3.16□□□□□ -1.9
CHRNA1P02708 AC093278.1-201ENST00000494700 600 ntBASIC3.16□□□□□ -1.9
CHRNA1P02708 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.16□□□□□ -1.9
CHRNA1P02708 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.16□□□□□ -1.9
CHRNA1P02708 AC113347.3-201ENST00000509113 148 ntBASIC3.16□□□□□ -1.9
CHRNA1P02708 MTCYBP16-201ENST00000509187 1129 ntBASIC3.16□□□□□ -1.9
CHRNA1P02708 RNU6-1225P-201ENST00000516336 65 ntBASIC3.16□□□□□ -1.9
CHRNA1P02708 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.16□□□□□ -1.9
CHRNA1P02708 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.16□□□□□ -1.9
CHRNA1P02708 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.16□□□□□ -1.9
CHRNA1P02708 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.16□□□□□ -1.9
CHRNA1P02708 AL391156.1-201ENST00000554965 554 ntBASIC3.16□□□□□ -1.9
CHRNA1P02708 LARP7P2-201ENST00000575306 125 ntBASIC3.16□□□□□ -1.9
CHRNA1P02708 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.16□□□□□ -1.9
CHRNA1P02708 FAM60BP-201ENST00000578364 658 ntBASIC3.16□□□□□ -1.9
CHRNA1P02708 MIR4509-3-201ENST00000578671 94 ntBASIC3.16□□□□□ -1.9
CHRNA1P02708 MIR4509-2-201ENST00000583920 94 ntBASIC3.16□□□□□ -1.9
CHRNA1P02708 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.16□□□□□ -1.9
CHRNA1P02708 AC021749.1-201ENST00000604322 607 ntBASIC3.16□□□□□ -1.9
CHRNA1P02708 AL035413.2-201ENST00000604801 525 ntBASIC3.16□□□□□ -1.9
CHRNA1P02708 AC144521.1-201ENST00000607148 956 ntBASIC3.16□□□□□ -1.9
CHRNA1P02708 AC024257.5-201ENST00000612739 531 ntBASIC3.16□□□□□ -1.9
CHRNA1P02708 AL110115.1-201ENST00000614396 364 ntBASIC3.16□□□□□ -1.9
CHRNA1P02708 AC002076.2-201ENST00000617362 122 ntBASIC3.16□□□□□ -1.9
CHRNA1P02708 MIR4509-1-201ENST00000618224 94 ntBASIC3.16□□□□□ -1.9
CHRNA1P02708 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.16□□□□□ -1.9
CHRNA1P02708 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CHRNA1P02708 AP003122.5-201ENST00000527668 3766 ntBASIC3.15□□□□□ -1.9
CHRNA1P02708 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CHRNA1P02708 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
CHRNA1P02708 RNU6-216P-201ENST00000363282 104 ntBASIC3.15□□□□□ -1.91
CHRNA1P02708 U3.42-201ENST00000408746 214 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms