Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 ZNF92P1Y-201ENST00000415010 1191 ntBASIC2.09□□□□□ -2.08
COL4A1P02462 AL590623.1-201ENST00000427864 105 ntBASIC2.09□□□□□ -2.08
COL4A1P02462 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC2.09□□□□□ -2.08
COL4A1P02462 AL353898.1-201ENST00000444055 238 ntBASIC2.09□□□□□ -2.08
COL4A1P02462 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.09□□□□□ -2.08
COL4A1P02462 RSL24D1P2-201ENST00000445584 366 ntBASIC2.09□□□□□ -2.08
COL4A1P02462 AC090071.1-201ENST00000507713 644 ntBASIC2.09□□□□□ -2.08
COL4A1P02462 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC2.09□□□□□ -2.08
COL4A1P02462 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.09□□□□□ -2.08
COL4A1P02462 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.09□□□□□ -2.08
COL4A1P02462 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.09□□□□□ -2.08
COL4A1P02462 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.09□□□□□ -2.08
COL4A1P02462 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.09□□□□□ -2.08
COL4A1P02462 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
COL4A1P02462 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
COL4A1P02462 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
COL4A1P02462 Y_RNA.122-201ENST00000363331 96 ntBASIC2.08□□□□□ -2.08
COL4A1P02462 MIR421-201ENST00000365696 85 ntBASIC2.08□□□□□ -2.08
COL4A1P02462 RNU6-152P-201ENST00000384037 107 ntBASIC2.08□□□□□ -2.08
COL4A1P02462 RPL19P1-201ENST00000411635 428 ntBASIC2.08□□□□□ -2.08
COL4A1P02462 DPPA2P1-201ENST00000428060 556 ntBASIC2.08□□□□□ -2.08
COL4A1P02462 RPS27P5-201ENST00000444247 244 ntBASIC2.08□□□□□ -2.08
COL4A1P02462 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.08□□□□□ -2.08
COL4A1P02462 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.08□□□□□ -2.08
COL4A1P02462 RPL7P5-201ENST00000471472 736 ntBASIC2.08□□□□□ -2.08
COL4A1P02462 AC069528.1-202ENST00000482888 637 ntBASIC2.08□□□□□ -2.08
COL4A1P02462 SUMO1P1-201ENST00000497904 306 ntBASIC2.08□□□□□ -2.08
COL4A1P02462 AC005840.1-201ENST00000498412 377 ntBASIC2.08□□□□□ -2.08
COL4A1P02462 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
COL4A1P02462 AC108078.2-201ENST00000510750 236 ntBASIC2.08□□□□□ -2.08
COL4A1P02462 SNORA31.11-201ENST00000516528 139 ntBASIC2.08□□□□□ -2.08
COL4A1P02462 RNU6-347P-201ENST00000516658 105 ntBASIC2.08□□□□□ -2.08
COL4A1P02462 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC2.08□□□□□ -2.08
COL4A1P02462 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.08□□□□□ -2.08
COL4A1P02462 SUB1P3-201ENST00000564581 315 ntBASIC2.08□□□□□ -2.08
COL4A1P02462 AC010735.1-201ENST00000567305 1026 ntBASIC2.08□□□□□ -2.08
COL4A1P02462 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.08□□□□□ -2.08
COL4A1P02462 AC124283.4-201ENST00000581815 456 ntBASIC2.08□□□□□ -2.08
COL4A1P02462 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.08□□□□□ -2.08
COL4A1P02462 AC245128.3-201ENST00000594721 748 ntBASIC2.08□□□□□ -2.08
COL4A1P02462 RPL23AP78-201ENST00000599928 470 ntBASIC2.08□□□□□ -2.08
COL4A1P02462 AC090425.2-201ENST00000608818 501 ntBASIC2.08□□□□□ -2.08
COL4A1P02462 AC016911.1-201ENST00000613297 452 ntBASIC2.08□□□□□ -2.08
COL4A1P02462 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
COL4A1P02462 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.08□□□□□ -2.08
COL4A1P02462 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
COL4A1P02462 RNU6-225P-201ENST00000384613 103 ntBASIC2.07□□□□□ -2.08
COL4A1P02462 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
COL4A1P02462 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC2.07□□□□□ -2.08
COL4A1P02462 AC073464.3-201ENST00000422564 712 ntBASIC2.07□□□□□ -2.08
COL4A1P02462 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.07□□□□□ -2.08
COL4A1P02462 MTCO3P21-201ENST00000430791 643 ntBASIC2.07□□□□□ -2.08
COL4A1P02462 Z85994.2-201ENST00000434327 452 ntBASIC2.07□□□□□ -2.08
COL4A1P02462 HNRNPDLP3-201ENST00000456745 380 ntBASIC2.07□□□□□ -2.08
COL4A1P02462 MTND4LP22-201ENST00000508209 276 ntBASIC2.07□□□□□ -2.08
COL4A1P02462 AC021146.7-201ENST00000509604 775 ntBASIC2.07□□□□□ -2.08
COL4A1P02462 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.07□□□□□ -2.08
COL4A1P02462 ARL2BPP2-201ENST00000550907 489 ntBASIC2.07□□□□□ -2.08
COL4A1P02462 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.07□□□□□ -2.08
COL4A1P02462 AL118496.1-201ENST00000440201 1812 ntBASIC2.06□□□□□ -2.08
COL4A1P02462 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
COL4A1P02462 RNA5SP189-201ENST00000364920 115 ntBASIC2.06□□□□□ -2.08
COL4A1P02462 AC083799.1-201ENST00000366451 910 ntBASIC2.06□□□□□ -2.08
COL4A1P02462 SNRPEP2-201ENST00000397592 279 ntBASIC2.06□□□□□ -2.08
COL4A1P02462 RNA5SP498-201ENST00000411342 120 ntBASIC2.06□□□□□ -2.08
COL4A1P02462 HMGB3P2-201ENST00000411913 584 ntBASIC2.06□□□□□ -2.08
COL4A1P02462 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.06□□□□□ -2.08
COL4A1P02462 AL353729.1-201ENST00000425044 720 ntBASIC2.06□□□□□ -2.08
COL4A1P02462 AL392003.1-201ENST00000434394 243 ntBASIC2.06□□□□□ -2.08
COL4A1P02462 AL109741.2-201ENST00000455561 343 ntBASIC2.06□□□□□ -2.08
COL4A1P02462 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.06□□□□□ -2.08
COL4A1P02462 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.06□□□□□ -2.08
COL4A1P02462 RNU6-760P-201ENST00000516078 97 ntBASIC2.06□□□□□ -2.08
COL4A1P02462 SNORA31.15-201ENST00000516771 132 ntBASIC2.06□□□□□ -2.08
COL4A1P02462 AC104115.2-201ENST00000523026 687 ntBASIC2.06□□□□□ -2.08
COL4A1P02462 OR4V1P-201ENST00000525394 1140 ntBASIC2.06□□□□□ -2.08
COL4A1P02462 AC012360.2-201ENST00000609349 391 ntBASIC2.06□□□□□ -2.08
COL4A1P02462 AC104307.1-201ENST00000616142 196 ntBASIC2.06□□□□□ -2.08
COL4A1P02462 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
COL4A1P02462 AL139276.1-201ENST00000311910 1001 ntBASIC2.06□□□□□ -2.08
COL4A1P02462 RNA5SP27-201ENST00000363839 119 ntBASIC2.06□□□□□ -2.08
COL4A1P02462 RNU6-317P-201ENST00000384031 107 ntBASIC2.06□□□□□ -2.08
COL4A1P02462 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.06□□□□□ -2.08
COL4A1P02462 RPL21P2-201ENST00000440049 481 ntBASIC2.06□□□□□ -2.08
COL4A1P02462 RPL23AP58-201ENST00000440453 469 ntBASIC2.06□□□□□ -2.08
COL4A1P02462 MTCO1P42-201ENST00000457379 726 ntBASIC2.06□□□□□ -2.08
COL4A1P02462 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC2.06□□□□□ -2.08
COL4A1P02462 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.06□□□□□ -2.08
COL4A1P02462 AC012181.1-201ENST00000479895 423 ntBASIC2.06□□□□□ -2.08
COL4A1P02462 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
COL4A1P02462 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.06□□□□□ -2.08
COL4A1P02462 AC010546.1-201ENST00000569391 485 ntBASIC2.06□□□□□ -2.08
COL4A1P02462 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.06□□□□□ -2.08
COL4A1P02462 LINC00216-201ENST00000623548 1126 ntBASIC2.06□□□□□ -2.08
COL4A1P02462 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
COL4A1P02462 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.05□□□□□ -2.08
COL4A1P02462 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC2.05□□□□□ -2.08
COL4A1P02462 SNORA25.9-201ENST00000365087 128 ntBASIC2.05□□□□□ -2.08
COL4A1P02462 FGF7P8-201ENST00000402994 292 ntBASIC2.05□□□□□ -2.08
COL4A1P02462 RN7SKP101-201ENST00000411376 320 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 141.5 ms