Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.41□□□□□ -1.86
COL2A1P02458 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
COL2A1P02458 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
COL2A1P02458 AL672167.1-206ENST00000356293 943 ntBASIC3.41□□□□□ -1.86
COL2A1P02458 RNU1-87P-201ENST00000363727 170 ntBASIC3.41□□□□□ -1.86
COL2A1P02458 RNA5SP27-201ENST00000363839 119 ntBASIC3.41□□□□□ -1.86
COL2A1P02458 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.41□□□□□ -1.86
COL2A1P02458 SNORA46-201ENST00000384762 135 ntBASIC3.41□□□□□ -1.86
COL2A1P02458 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.41□□□□□ -1.86
COL2A1P02458 RN7SKP58-201ENST00000411010 305 ntBASIC3.41□□□□□ -1.86
COL2A1P02458 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.41□□□□□ -1.86
COL2A1P02458 FNDC3CP-201ENST00000420795 1155 ntBASIC3.41□□□□□ -1.86
COL2A1P02458 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
COL2A1P02458 MYL8P-204ENST00000431574 518 ntBASIC3.41□□□□□ -1.86
COL2A1P02458 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.41□□□□□ -1.86
COL2A1P02458 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.41□□□□□ -1.86
COL2A1P02458 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.41□□□□□ -1.86
COL2A1P02458 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.41□□□□□ -1.86
COL2A1P02458 AC011979.1-201ENST00000472300 483 ntBASIC3.41□□□□□ -1.86
COL2A1P02458 RPL30P6-201ENST00000475925 342 ntBASIC3.41□□□□□ -1.86
COL2A1P02458 AC107398.1-201ENST00000486904 505 ntBASIC3.41□□□□□ -1.86
COL2A1P02458 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.41□□□□□ -1.86
COL2A1P02458 AC113347.3-201ENST00000509113 148 ntBASIC3.41□□□□□ -1.86
COL2A1P02458 SCGB1D5P-201ENST00000515134 247 ntBASIC3.41□□□□□ -1.86
COL2A1P02458 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.41□□□□□ -1.86
COL2A1P02458 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.41□□□□□ -1.86
COL2A1P02458 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.41□□□□□ -1.86
COL2A1P02458 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.41□□□□□ -1.86
COL2A1P02458 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.41□□□□□ -1.86
COL2A1P02458 AC084757.1-201ENST00000559987 490 ntBASIC3.41□□□□□ -1.86
COL2A1P02458 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.41□□□□□ -1.86
COL2A1P02458 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.41□□□□□ -1.86
COL2A1P02458 AL356055.1-201ENST00000602528 446 ntBASIC3.41□□□□□ -1.86
COL2A1P02458 AC083899.3-201ENST00000603413 594 ntBASIC3.41□□□□□ -1.86
COL2A1P02458 AC007619.2-201ENST00000605743 379 ntBASIC3.41□□□□□ -1.86
COL2A1P02458 AL008729.2-201ENST00000606393 473 ntBASIC3.41□□□□□ -1.86
COL2A1P02458 AC078899.5-201ENST00000612475 178 ntBASIC3.41□□□□□ -1.86
COL2A1P02458 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
COL2A1P02458 PLCE1P1-201ENST00000622094 305 ntBASIC3.41□□□□□ -1.86
COL2A1P02458 AP003400.5-201ENST00000624827 617 ntBASIC3.41□□□□□ -1.86
COL2A1P02458 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.41□□□□□ -1.86
COL2A1P02458 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.41□□□□□ -1.86
COL2A1P02458 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
COL2A1P02458 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
COL2A1P02458 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
COL2A1P02458 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
COL2A1P02458 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
COL2A1P02458 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
COL2A1P02458 MIR708-201ENST00000390708 88 ntBASIC3.4□□□□□ -1.87
COL2A1P02458 BTF3P7-201ENST00000407097 488 ntBASIC3.4□□□□□ -1.87
COL2A1P02458 RPL26P37-201ENST00000411983 438 ntBASIC3.4□□□□□ -1.87
COL2A1P02458 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.4□□□□□ -1.87
COL2A1P02458 CCDC58P2-201ENST00000417131 366 ntBASIC3.4□□□□□ -1.87
COL2A1P02458 AC234781.4-201ENST00000419384 244 ntBASIC3.4□□□□□ -1.87
COL2A1P02458 RPL31P12-201ENST00000422587 358 ntBASIC3.4□□□□□ -1.87
COL2A1P02458 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.4□□□□□ -1.87
COL2A1P02458 DUTP6-201ENST00000425573 462 ntBASIC3.4□□□□□ -1.87
COL2A1P02458 NPM1P24-201ENST00000428039 894 ntBASIC3.4□□□□□ -1.87
COL2A1P02458 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.4□□□□□ -1.87
COL2A1P02458 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.4□□□□□ -1.87
COL2A1P02458 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.4□□□□□ -1.87
COL2A1P02458 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.4□□□□□ -1.87
COL2A1P02458 RPL29P29-201ENST00000448725 423 ntBASIC3.4□□□□□ -1.87
COL2A1P02458 AL162389.1-201ENST00000449233 177 ntBASIC3.4□□□□□ -1.87
COL2A1P02458 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.4□□□□□ -1.87
COL2A1P02458 OR6C5P-201ENST00000452388 923 ntBASIC3.4□□□□□ -1.87
COL2A1P02458 RPL5P13-201ENST00000462840 709 ntBASIC3.4□□□□□ -1.87
COL2A1P02458 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
COL2A1P02458 CDC42P4-201ENST00000510507 563 ntBASIC3.4□□□□□ -1.87
COL2A1P02458 RFPL4AP3-201ENST00000515267 345 ntBASIC3.4□□□□□ -1.87
COL2A1P02458 SNORA31.13-201ENST00000516624 135 ntBASIC3.4□□□□□ -1.87
COL2A1P02458 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC3.4□□□□□ -1.87
COL2A1P02458 COX6CP8-201ENST00000522620 226 ntBASIC3.4□□□□□ -1.87
COL2A1P02458 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.4□□□□□ -1.87
COL2A1P02458 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.4□□□□□ -1.87
COL2A1P02458 AC136619.2-201ENST00000563361 631 ntBASIC3.4□□□□□ -1.87
COL2A1P02458 AC138761.3-201ENST00000579993 334 ntBASIC3.4□□□□□ -1.87
COL2A1P02458 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.4□□□□□ -1.87
COL2A1P02458 AL136363.2-201ENST00000604173 851 ntBASIC3.4□□□□□ -1.87
COL2A1P02458 AC110741.2-201ENST00000605278 268 ntBASIC3.4□□□□□ -1.87
COL2A1P02458 AC069545.1-201ENST00000605671 358 ntBASIC3.4□□□□□ -1.87
COL2A1P02458 AC131235.4-201ENST00000609288 620 ntBASIC3.4□□□□□ -1.87
COL2A1P02458 AC022509.4-201ENST00000621404 572 ntBASIC3.4□□□□□ -1.87
COL2A1P02458 AC116618.1-201ENST00000634617 774 ntBASIC3.4□□□□□ -1.87
COL2A1P02458 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
COL2A1P02458 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
COL2A1P02458 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.4□□□□□ -1.87
COL2A1P02458 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
COL2A1P02458 AP000776.1-201ENST00000530032 1663 ntBASIC3.4□□□□□ -1.87
COL2A1P02458 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
COL2A1P02458 AL049780.3-201ENST00000624612 1583 ntBASIC3.39□□□□□ -1.87
COL2A1P02458 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.39□□□□□ -1.87
COL2A1P02458 AC092447.7-201ENST00000422212 1621 ntBASIC3.39□□□□□ -1.87
COL2A1P02458 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
COL2A1P02458 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
COL2A1P02458 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
COL2A1P02458 RNY4P24-201ENST00000362735 96 ntBASIC3.39□□□□□ -1.87
COL2A1P02458 Y_RNA.70-201ENST00000362886 110 ntBASIC3.39□□□□□ -1.87
COL2A1P02458 Y_RNA.88-201ENST00000363029 99 ntBASIC3.39□□□□□ -1.87
COL2A1P02458 U3.6-201ENST00000363622 211 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms