Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 BNIP3P23-201ENST00000599655 511 ntBASIC3.62□□□□□ -1.83
LDLRP01130 AL390208.1-201ENST00000605885 644 ntBASIC3.62□□□□□ -1.83
LDLRP01130 AC090186.1-201ENST00000605991 572 ntBASIC3.62□□□□□ -1.83
LDLRP01130 AL357078.3-201ENST00000607528 618 ntBASIC3.62□□□□□ -1.83
LDLRP01130 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.62□□□□□ -1.83
LDLRP01130 AL391497.1-201ENST00000608671 547 ntBASIC3.62□□□□□ -1.83
LDLRP01130 AC069234.5-201ENST00000611056 416 ntBASIC3.62□□□□□ -1.83
LDLRP01130 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LDLRP01130 Z99129.1-201ENST00000612510 255 ntBASIC3.62□□□□□ -1.83
LDLRP01130 AC091925.2-201ENST00000625059 256 ntBASIC3.62□□□□□ -1.83
LDLRP01130 AC244258.1-201ENST00000637553 1071 ntBASIC3.62□□□□□ -1.83
LDLRP01130 PRO1804-201ENST00000623780 2050 ntBASIC3.62□□□□□ -1.83
LDLRP01130 AP001148.1-201ENST00000624124 2359 ntBASIC3.62□□□□□ -1.83
LDLRP01130 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LDLRP01130 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
LDLRP01130 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LDLRP01130 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
LDLRP01130 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.61□□□□□ -1.83
LDLRP01130 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LDLRP01130 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.61□□□□□ -1.83
LDLRP01130 RNU6-28P-201ENST00000362378 107 ntBASIC3.61□□□□□ -1.83
LDLRP01130 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.61□□□□□ -1.83
LDLRP01130 RNY3P14-201ENST00000384309 102 ntBASIC3.61□□□□□ -1.83
LDLRP01130 MIR218-2-201ENST00000385006 110 ntBASIC3.61□□□□□ -1.83
LDLRP01130 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.61□□□□□ -1.83
LDLRP01130 TPMTP3-201ENST00000411928 735 ntBASIC3.61□□□□□ -1.83
LDLRP01130 RPL7P8-201ENST00000411964 730 ntBASIC3.61□□□□□ -1.83
LDLRP01130 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.61□□□□□ -1.83
LDLRP01130 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.61□□□□□ -1.83
LDLRP01130 HMGB1P11-201ENST00000413899 637 ntBASIC3.61□□□□□ -1.83
LDLRP01130 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.61□□□□□ -1.83
LDLRP01130 RPL23AP39-201ENST00000415533 405 ntBASIC3.61□□□□□ -1.83
LDLRP01130 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.61□□□□□ -1.83
LDLRP01130 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.61□□□□□ -1.83
LDLRP01130 MTCO2P5-201ENST00000422621 426 ntBASIC3.61□□□□□ -1.83
LDLRP01130 AC007742.1-201ENST00000425789 329 ntBASIC3.61□□□□□ -1.83
LDLRP01130 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.61□□□□□ -1.83
LDLRP01130 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.61□□□□□ -1.83
LDLRP01130 MRPS10P2-201ENST00000431226 381 ntBASIC3.61□□□□□ -1.83
LDLRP01130 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.61□□□□□ -1.83
LDLRP01130 ELOCP26-201ENST00000436067 329 ntBASIC3.61□□□□□ -1.83
LDLRP01130 TBCAP1-201ENST00000436520 327 ntBASIC3.61□□□□□ -1.83
LDLRP01130 AC092641.1-201ENST00000440229 772 ntBASIC3.61□□□□□ -1.83
LDLRP01130 AL831737.1-201ENST00000441288 271 ntBASIC3.61□□□□□ -1.83
LDLRP01130 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.61□□□□□ -1.83
LDLRP01130 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.61□□□□□ -1.83
LDLRP01130 KATNBL1P6-201ENST00000453433 915 ntBASIC3.61□□□□□ -1.83
LDLRP01130 TPT1P7-201ENST00000458300 517 ntBASIC3.61□□□□□ -1.83
LDLRP01130 RNU6-956P-201ENST00000458868 103 ntBASIC3.61□□□□□ -1.83
LDLRP01130 AP001992.1-205ENST00000462248 379 ntBASIC3.61□□□□□ -1.83
LDLRP01130 AC004801.2-202ENST00000463559 283 ntBASIC3.61□□□□□ -1.83
LDLRP01130 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.61□□□□□ -1.83
LDLRP01130 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.61□□□□□ -1.83
LDLRP01130 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.61□□□□□ -1.83
LDLRP01130 AC008489.1-201ENST00000524271 483 ntBASIC3.61□□□□□ -1.83
LDLRP01130 CBX3P7-201ENST00000532876 502 ntBASIC3.61□□□□□ -1.83
LDLRP01130 AP000873.5-201ENST00000533906 236 ntBASIC3.61□□□□□ -1.83
LDLRP01130 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.61□□□□□ -1.83
LDLRP01130 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.61□□□□□ -1.83
LDLRP01130 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.61□□□□□ -1.83
LDLRP01130 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.61□□□□□ -1.83
LDLRP01130 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.61□□□□□ -1.83
LDLRP01130 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.61□□□□□ -1.83
LDLRP01130 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.61□□□□□ -1.83
LDLRP01130 AL355812.1-201ENST00000603215 216 ntBASIC3.61□□□□□ -1.83
LDLRP01130 AP000403.1-201ENST00000603349 851 ntBASIC3.61□□□□□ -1.83
LDLRP01130 AL137849.1-201ENST00000604767 169 ntBASIC3.61□□□□□ -1.83
LDLRP01130 AC106028.5-201ENST00000610332 395 ntBASIC3.61□□□□□ -1.83
LDLRP01130 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.61□□□□□ -1.83
LDLRP01130 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
LDLRP01130 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.61□□□□□ -1.83
LDLRP01130 U6atac.1-201ENST00000616025 117 ntBASIC3.61□□□□□ -1.83
LDLRP01130 AC005609.4-201ENST00000625071 447 ntBASIC3.61□□□□□ -1.83
LDLRP01130 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.61□□□□□ -1.83
LDLRP01130 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.61□□□□□ -1.83
LDLRP01130 AC127502.3-201ENST00000636170 1206 ntBASIC3.61□□□□□ -1.83
LDLRP01130 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
LDLRP01130 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LDLRP01130 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LDLRP01130 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.61□□□□□ -1.83
LDLRP01130 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
LDLRP01130 AL079305.1-201ENST00000623159 3008 ntBASIC3.6□□□□□ -1.83
LDLRP01130 MTCO1P12-201ENST00000414273 1543 ntBASIC3.6□□□□□ -1.83
LDLRP01130 CR383658.2-201ENST00000547576 1525 ntBASIC3.6□□□□□ -1.83
LDLRP01130 TNPO1P3-201ENST00000436471 2662 ntBASIC3.6□□□□□ -1.83
LDLRP01130 AC097714.1-201ENST00000511272 1647 ntBASIC3.6□□□□□ -1.83
LDLRP01130 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LDLRP01130 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.6□□□□□ -1.83
LDLRP01130 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LDLRP01130 MTND1P21-201ENST00000412991 285 ntBASIC3.6□□□□□ -1.83
LDLRP01130 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LDLRP01130 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.6□□□□□ -1.83
LDLRP01130 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.6□□□□□ -1.83
LDLRP01130 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.6□□□□□ -1.83
LDLRP01130 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.6□□□□□ -1.83
LDLRP01130 TRIM60P18-201ENST00000441518 828 ntBASIC3.6□□□□□ -1.83
LDLRP01130 USP9YP29-201ENST00000445112 563 ntBASIC3.6□□□□□ -1.83
LDLRP01130 MTCO1P27-201ENST00000448269 226 ntBASIC3.6□□□□□ -1.83
LDLRP01130 HMGB1P15-201ENST00000453854 435 ntBASIC3.6□□□□□ -1.83
LDLRP01130 SUMO2P2-201ENST00000456482 255 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms