Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 MRPS18BP2-201ENST00000434310 759 ntBASIC4.2□□□□□ -1.74
VPS4BO75351 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.2□□□□□ -1.74
VPS4BO75351 RPL23AP33-201ENST00000442301 452 ntBASIC4.2□□□□□ -1.74
VPS4BO75351 HSFY6P-201ENST00000445573 403 ntBASIC4.2□□□□□ -1.74
VPS4BO75351 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.2□□□□□ -1.74
VPS4BO75351 FDX1P2-201ENST00000450769 375 ntBASIC4.2□□□□□ -1.74
VPS4BO75351 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.2□□□□□ -1.74
VPS4BO75351 RNU6-420P-201ENST00000458780 107 ntBASIC4.2□□□□□ -1.74
VPS4BO75351 snoU13.22-201ENST00000459428 104 ntBASIC4.2□□□□□ -1.74
VPS4BO75351 AC083798.1-201ENST00000472671 131 ntBASIC4.2□□□□□ -1.74
VPS4BO75351 RPL21P103-201ENST00000479921 488 ntBASIC4.2□□□□□ -1.74
VPS4BO75351 AC108145.1-201ENST00000503770 153 ntBASIC4.2□□□□□ -1.74
VPS4BO75351 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.2□□□□□ -1.74
VPS4BO75351 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.2□□□□□ -1.74
VPS4BO75351 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
VPS4BO75351 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.2□□□□□ -1.74
VPS4BO75351 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.2□□□□□ -1.74
VPS4BO75351 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.2□□□□□ -1.74
VPS4BO75351 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.2□□□□□ -1.74
VPS4BO75351 COX6CP3-201ENST00000580869 223 ntBASIC4.2□□□□□ -1.74
VPS4BO75351 AC091135.1-201ENST00000585943 307 ntBASIC4.2□□□□□ -1.74
VPS4BO75351 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.2□□□□□ -1.74
VPS4BO75351 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.2□□□□□ -1.74
VPS4BO75351 AC079587.1-201ENST00000603846 277 ntBASIC4.2□□□□□ -1.74
VPS4BO75351 AC007621.1-201ENST00000604544 437 ntBASIC4.2□□□□□ -1.74
VPS4BO75351 AC115621.1-201ENST00000604653 858 ntBASIC4.2□□□□□ -1.74
VPS4BO75351 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.2□□□□□ -1.74
VPS4BO75351 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.2□□□□□ -1.74
VPS4BO75351 AC020634.1-201ENST00000608701 549 ntBASIC4.2□□□□□ -1.74
VPS4BO75351 AC093788.1-201ENST00000609356 927 ntBASIC4.2□□□□□ -1.74
VPS4BO75351 AC103710.2-201ENST00000609912 942 ntBASIC4.2□□□□□ -1.74
VPS4BO75351 AC112204.3-201ENST00000623822 332 ntBASIC4.2□□□□□ -1.74
VPS4BO75351 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
VPS4BO75351 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.2□□□□□ -1.74
VPS4BO75351 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
VPS4BO75351 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
VPS4BO75351 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
VPS4BO75351 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VPS4BO75351 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
VPS4BO75351 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.19□□□□□ -1.74
VPS4BO75351 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
VPS4BO75351 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.19□□□□□ -1.74
VPS4BO75351 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.19□□□□□ -1.74
VPS4BO75351 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
VPS4BO75351 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VPS4BO75351 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
VPS4BO75351 RNU6-456P-201ENST00000384493 107 ntBASIC4.19□□□□□ -1.74
VPS4BO75351 RNA5SP171-201ENST00000391071 115 ntBASIC4.19□□□□□ -1.74
VPS4BO75351 RPS7P15-201ENST00000415804 584 ntBASIC4.19□□□□□ -1.74
VPS4BO75351 CCDC58P2-201ENST00000417131 366 ntBASIC4.19□□□□□ -1.74
VPS4BO75351 ELOCP4-201ENST00000420090 333 ntBASIC4.19□□□□□ -1.74
VPS4BO75351 SNRPEP10-201ENST00000420249 274 ntBASIC4.19□□□□□ -1.74
VPS4BO75351 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC4.19□□□□□ -1.74
VPS4BO75351 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.19□□□□□ -1.74
VPS4BO75351 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.19□□□□□ -1.74
VPS4BO75351 GPR143P-201ENST00000434155 205 ntBASIC4.19□□□□□ -1.74
VPS4BO75351 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.19□□□□□ -1.74
VPS4BO75351 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.19□□□□□ -1.74
VPS4BO75351 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC4.19□□□□□ -1.74
VPS4BO75351 TPT1P14-201ENST00000448018 505 ntBASIC4.19□□□□□ -1.74
VPS4BO75351 RPS17P13-201ENST00000448974 407 ntBASIC4.19□□□□□ -1.74
VPS4BO75351 MTND3P10-201ENST00000450967 341 ntBASIC4.19□□□□□ -1.74
VPS4BO75351 AC108059.3-201ENST00000456388 214 ntBASIC4.19□□□□□ -1.74
VPS4BO75351 ST13P14-201ENST00000474095 734 ntBASIC4.19□□□□□ -1.74
VPS4BO75351 AC006517.1-201ENST00000480485 328 ntBASIC4.19□□□□□ -1.74
VPS4BO75351 RNU6-1281P-201ENST00000516223 105 ntBASIC4.19□□□□□ -1.74
VPS4BO75351 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.19□□□□□ -1.74
VPS4BO75351 MTND1P35-201ENST00000526739 508 ntBASIC4.19□□□□□ -1.74
VPS4BO75351 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.19□□□□□ -1.74
VPS4BO75351 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.19□□□□□ -1.74
VPS4BO75351 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
VPS4BO75351 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.19□□□□□ -1.74
VPS4BO75351 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
VPS4BO75351 AC090616.5-202ENST00000582111 297 ntBASIC4.19□□□□□ -1.74
VPS4BO75351 AC105224.1-201ENST00000587055 421 ntBASIC4.19□□□□□ -1.74
VPS4BO75351 AC060780.3-201ENST00000589464 80 ntBASIC4.19□□□□□ -1.74
VPS4BO75351 AC025449.1-201ENST00000603896 529 ntBASIC4.19□□□□□ -1.74
VPS4BO75351 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.19□□□□□ -1.74
VPS4BO75351 AL020991.1-201ENST00000612314 373 ntBASIC4.19□□□□□ -1.74
VPS4BO75351 AC006133.1-201ENST00000617106 264 ntBASIC4.19□□□□□ -1.74
VPS4BO75351 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.19□□□□□ -1.74
VPS4BO75351 AC103858.2-201ENST00000621471 543 ntBASIC4.19□□□□□ -1.74
VPS4BO75351 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.19□□□□□ -1.74
VPS4BO75351 FER-210ENST00000628534 558 ntTSL 5 BASIC4.19□□□□□ -1.74
VPS4BO75351 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.19□□□□□ -1.74
VPS4BO75351 AC090229.1-201ENST00000590983 1609 ntBASIC4.19□□□□□ -1.74
VPS4BO75351 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.19□□□□□ -1.74
VPS4BO75351 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
VPS4BO75351 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VPS4BO75351 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VPS4BO75351 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
VPS4BO75351 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.18□□□□□ -1.74
VPS4BO75351 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VPS4BO75351 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
VPS4BO75351 OR1S2-201ENST00000302592 978 ntBASIC4.18□□□□□ -1.74
VPS4BO75351 SNORA72.1-201ENST00000363485 129 ntBASIC4.18□□□□□ -1.74
VPS4BO75351 RNY1P12-201ENST00000364251 105 ntBASIC4.18□□□□□ -1.74
VPS4BO75351 RNY3P13-201ENST00000365542 102 ntBASIC4.18□□□□□ -1.74
VPS4BO75351 RNU6-74P-201ENST00000384235 107 ntBASIC4.18□□□□□ -1.74
VPS4BO75351 MIR659-201ENST00000384963 97 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms